- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Cisavi.CG.ENS81.R5.9...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S330.g00890.01.t
Possible name(s)
AP2B1; AP3B1; COPB1
Gene model
Location
S330 [101,121 / 110,030]
Amino acid sequence
Length: 585
>Harore.CG.MTP2014.S330.g00890.01.p
MTSAEGICYTLINVSSVTDSEPSNETELKAEIEHGDVRTKTEALKRVILMTINGEKLQGL
LMTIIKYLLPSDDHTIKKLLLIFWEIWPKTDNDGKLRPEMILVCDAYRKDLQHPNEFIRG
STLRFLCKLRQPELLEPLMPAIRACLEHRHSYVRRNTVLAIYTIYRKFENLIPDAPELIH
EFLENEKDASCQRNAFMMLIHADQERALDYLSTCIDQVNSFNDILQLVIVELVYKVCHAN
PGERARFIRCIYNLLQSSSPAVRYEAAGTLVTLSSAPTAVRIQGHDDTDKYRQLLVRAMH
QCTVKFPDTAAAVIPVLMEFLSDSNELAAADVLVFVREAIQRHDTHKHLILDKLLDVFSS
IRNLKIMRGVLWILGEYCSGIERILHFMDEIRKSVGRLPIVENELKLAAGEAPRETTQDS
APKKPSTQRKVTEMGTYVTESALSVASTSKSAEKRPPLLHFFMTGDFSISSSLATALTKL
ALRFLQACSDTRKQNSFTAQCMLILSSVLHLGKSGLPTKPVTDDDEERICMCLKALSECT
PLMIEVFNVQCRESLSALLTIRSAEEASRQKAAEKNRSALTSVQV
Nucleotide sequence
Length: 1,787
>Harore.CG.MTP2014.S330.g00890.01.t
AGATTGGATACTAGCTTAAGCATAGGAATATGACATCTGCTGAAGGTATATGCTATACTT
TGATCAACGTTTCTTCGGTCACGGATTCGGAGCCATCGAATGAAACTGAATTGAAAGCAG
AGATCGAGCATGGAGACGTTCGCACTAAGACGGAGGCGTTGAAGCGAGTTATTCTGATGA
CTATAAATGGAGAAAAACTGCAGGGTCTCTTGATGACAATCATCAAATATCTTCTTCCGT
CGGATGACCACACCATCAAGAAATTGCTTTTGATTTTTTGGGAGATCTGGCCAAAAACTG
ACAACGATGGCAAGCTCAGACCTGAAATGATTCTTGTCTGTGATGCTTACAGGAAGGATT
TGCAACACCCTAATGAGTTCATTCGAGGATCAACGCTCCGCTTTCTTTGCAAGCTTCGAC
AACCAGAATTGTTGGAACCATTGATGCCCGCCATAAGAGCGTGTCTGGAGCACCGTCACA
GCTATGTCAGGAGAAATACTGTGCTCGCTATTTATACAATTTATAGAAAATTTGAGAATC
TGATTCCTGATGCACCAGAACTCATCCACGAGTTCCTTGAAAATGAGAAGGATGCTTCGT
GCCAAAGAAACGCGTTCATGATGCTGATTCATGCTGACCAAGAAAGGGCACTGGACTATC
TGAGCACCTGCATTGACCAGGTTAATTCCTTCAATGACATACTTCAACTTGTCATCGTCG
AGTTAGTCTACAAGGTCTGCCATGCAAATCCAGGGGAACGTGCCAGATTCATTCGTTGTA
TTTACAACCTACTGCAGTCGTCCAGCCCAGCCGTTCGATACGAAGCTGCTGGGACTCTCG
TTACATTGTCTAGCGCTCCAACAGCTGTTCGCATCCAGGGTCACGATGACACTGATAAAT
ATCGTCAGCTGCTTGTCCGTGCTATGCATCAGTGTACTGTGAAATTCCCAGATACAGCAG
CAGCAGTGATACCTGTGCTTATGGAATTCCTCAGCGACAGCAACGAACTTGCAGCTGCCG
ACGTTCTGGTCTTTGTACGAGAAGCAATCCAACGCCACGATACGCACAAGCACTTGATTC
TGGACAAACTTCTCGACGTGTTTTCGTCTATCAGAAACCTGAAAATCATGCGAGGTGTGC
TTTGGATACTTGGTGAATATTGCTCCGGTATTGAAAGAATTCTTCATTTTATGGACGAAA
TTCGGAAATCTGTCGGCAGACTACCTATTGTCGAAAACGAATTGAAACTTGCAGCCGGTG
AAGCACCTAGGGAAACTACACAAGATTCTGCTCCTAAAAAACCCAGCACACAGCGCAAGG
TCACAGAGATGGGTACTTATGTCACAGAATCCGCTCTTAGTGTTGCTTCGACGAGCAAAT
CAGCGGAAAAACGTCCTCCGCTCCTTCACTTTTTCATGACAGGAGATTTTTCTATCTCCT
CGTCTCTTGCTACAGCACTCACTAAACTAGCGTTGCGATTTCTCCAAGCTTGTTCTGATA
CAAGAAAACAGAATTCATTTACTGCGCAATGTATGTTAATACTGTCAAGCGTACTCCACC
TTGGAAAATCCGGCCTTCCCACCAAGCCTGTAACAGATGATGACGAAGAAAGAATATGCA
TGTGTCTAAAGGCTCTGTCTGAATGTACGCCACTAATGATTGAAGTTTTTAACGTACAAT
GCCGAGAATCCCTTTCCGCTCTCCTTACCATACGTTCGGCTGAAGAAGCCTCCAGACAGA
AGGCAGCTGAAAAAAATAGATCCGCTTTGACATCCGTACAGGTATAA
| PANTHER |
COPB1 (IPR016460) - T[1-281] 3.1E-222 - T[284-578] 3.1E-222 |
| Gene3D |
ARM-like (IPR011989) - T[14-282] 7.1E-61 - T[283-458] 8.4E-20 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[23-279] 2.2E-66 - T[289-417] 3.5E-21 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[26-395] 4.74E-64 - T[463-484] 4.74E-64 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPB_HUMAN | 51.796 % | 639 | 0 |