- Transcript 'KH2012:KH.C4.407.v1....' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S331.g10175.01.t
Possible name(s)
ZNF112; ZNF226; ZNF234
Gene model
Location
S331 [29,048 / 29,813]
Amino acid sequence
Length: 254
>Harore.CG.MTP2014.S331.g10175.01.p
MMIHCEVCDLPCSCNGNLERHMRVHTKEKPFKCDVCEKCFPRQGNMKRHMRIHTNEKPLQ
CKICNKSWSHSGALKRHIQTLHMKVKPHWCEVCDKSFGRKSHLNSHIRMHLNIKMFECEI
CHKHFSRRGGLKVHMRTHTKEKLFQCDLCPAKFAENRDCKIHKERMHSETNCKCSVCGST
FTSRNDLKIHKEEHKGSDDKYHCEVCDLICSSLTDLAIHMRVHTKEKPFKCEICDKSFGR
IGDMKKHRRTFHRR
Nucleotide sequence
Length: 765
>Harore.CG.MTP2014.S331.g10175.01.t
ATGATGATACATTGTGAGGTTTGCGACTTACCATGTTCATGTAATGGCAATCTCGAGCGA
CACATGAGAGTTCACACAAAGGAAAAACCGTTCAAATGTGATGTTTGTGAGAAATGCTTT
CCCCGCCAGGGAAATATGAAAAGACACATGAGAATTCACACGAACGAGAAACCGTTACAA
TGTAAAATATGTAATAAATCCTGGAGTCATTCTGGTGCTTTGAAAAGGCACATACAAACT
CTTCATATGAAAGTGAAACCGCATTGGTGTGAAGTCTGTGATAAATCGTTTGGTCGGAAA
TCACATTTGAATAGTCACATTAGGATGCATCTGAATATTAAAATGTTCGAATGTGAGATT
TGTCATAAACATTTTTCACGAAGAGGAGGTTTGAAAGTCCACATGAGAACGCACACAAAG
GAAAAATTATTTCAATGTGACCTGTGCCCTGCAAAATTTGCAGAAAATAGGGATTGCAAA
ATACATAAGGAACGAATGCACAGTGAAACAAACTGTAAGTGTTCGGTATGTGGAAGTACA
TTCACTTCAAGGAATGATTTGAAGATACATAAGGAAGAACATAAAGGATCTGATGACAAA
TATCATTGTGAAGTTTGTGATTTAATATGTAGCAGTCTCACTGATTTGGCTATACATATG
AGAGTTCATACGAAGGAAAAACCATTCAAATGTGAAATATGCGATAAATCATTCGGACGC
ATTGGAGACATGAAAAAGCACAGACGAACTTTTCACAGGAGATAA
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[3-30] 11.552 - T[31-58] 15.791 - T[59-87] 11.302 - T[88-115] 11.946 - T[116-143] 14.025 - T[172-199] 10.949 - T[201-228] 12.05 - T[229-254] 11.655 |
| SMART |
Znf_C2H2_type (IPR013087) - T[3-25] 0.14 - T[31-53] 3.9E-5 - T[59-82] 0.12 - T[88-110] 0.066 - T[116-138] 2.5E-4 - T[144-167] 1.8 - T[172-194] 0.015 - T[201-223] 0.0017 - T[229-252] 0.0016 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[4-34] 1.43E-7 - T[25-77] 9.3E-18 - T[96-153] 7.28E-17 - T[138-190] 4.15E-10 - T[200-250] 5.5E-15 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[5-25] . - T[33-53] . - T[61-82] . - T[90-110] . - T[118-138] . - T[146-167] . - T[172-194] . - T[203-223] . - T[231-252] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN226_HUMAN | 41.057 % | 186 | 3.59E-54 |
| ZN112_HUMAN | 40.081 % | 184 | 3.3E-53 |
| ZN234_HUMAN | 41.057 % | 188 | 2.75E-55 |