- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S331.g15401.01.t
Possible name(s)
ZNF235; ZNF28; ZNF83
Gene model
Location
S331 [34,017 / 34,920]
Amino acid sequence
Length: 253
>Harore.CG.MTP2014.S331.g15401.01.p
MKSSLKEKPFRCGKCWRTFSRKQNYDRHVETHEDKKLFGCSVCGKGFKIAGDLQKHVQSQ
HFDTVDDDYTANEICNEKFTNMKDYERRRKSSKYVKRFCDNSSNLQGRKKTYECEVCHKK
FSRQDHVKEHMWIHTGEKLYKCKICGKTFAHSAHLSRHQVIHTGEKPYKCELCNKAFSRQ
EYIKSHMKSHTGEKPFKCDRCGKRFRHATHVSRHMKIHMRKIQHMCGVCDQSFVQKDLLK
KHLLTHGSIVDPV
Nucleotide sequence
Length: 762
>Harore.CG.MTP2014.S331.g15401.01.t
ATGAAAAGTTCACTGAAAGAAAAACCGTTCAGGTGTGGAAAATGTTGGAGAACTTTTTCC
AGAAAGCAAAATTACGACCGACATGTTGAAACCCACGAAGATAAGAAACTTTTCGGATGT
TCTGTGTGCGGCAAAGGATTCAAAATTGCTGGTGATTTGCAGAAACATGTACAATCTCAG
CATTTCGATACAGTGGATGATGATTATACGGCAAACGAGATCTGTAATGAGAAATTCACC
AATATGAAAGATTATGAAAGACGTCGGAAATCTTCAAAATATGTAAAGAGATTTTGTGAC
AACTCGTCGAACTTGCAAGGTCGGAAAAAGACATACGAATGTGAGGTATGTCACAAAAAG
TTTTCCAGGCAAGACCACGTGAAGGAACATATGTGGATCCACACGGGAGAAAAACTATAC
AAATGTAAGATATGCGGAAAGACGTTTGCGCACAGCGCTCATCTTAGTCGTCATCAGGTC
ATCCACACGGGAGAAAAACCTTACAAATGCGAACTATGCAACAAAGCATTCTCGAGGCAA
GAATACATAAAAAGTCACATGAAGAGTCACACGGGAGAAAAACCATTTAAATGCGACAGA
TGTGGAAAACGATTTCGTCACGCGACGCACGTGAGCAGACACATGAAAATCCACATGCGG
AAGATTCAGCACATGTGTGGCGTGTGTGATCAAAGTTTTGTTCAGAAAGACCTTTTGAAG
AAACATTTATTGACCCATGGTAGTATTGTTGACCCAGTTTGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[6-56] 1.55E-12 - T[110-162] 9.42E-17 - T[148-205] 2.19E-22 - T[190-242] 5.14E-15 |
| SMART |
Znf_C2H2_type (IPR013087) - T[10-32] 0.024 - T[38-61] 0.0074 - T[112-134] 0.23 - T[140-162] 7.7E-4 - T[168-190] 4.3E-4 - T[196-218] 0.0055 - T[224-246] 0.024 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[10-37] 11.406 - T[38-61] 10.242 - T[112-139] 13.983 - T[140-167] 17.496 - T[168-195] 16.54 - T[196-223] 12.591 - T[224-246] 9.328 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[12-32] . - T[40-61] . - T[114-134] . - T[142-162] . - T[170-190] . - T[198-218] . - T[226-246] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN235_HUMAN | 37.402 % | 173 | 8.86E-50 |
| ZN883_HUMAN | 37.736 % | 163 | 3.07E-48 |
| ZNF28_HUMAN | 39.167 % | 169 | 2.78E-48 |