- Transcript 'Moocci.CG.ELv1_2.S60...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S342.g15120.01.t
Possible name(s)
DNA2; IGHMBP2; UPF1
Gene model
Location
S342 [31,942 / 41,064]
Amino acid sequence
Length: 1,372
>Harore.CG.MTP2014.S342.g15120.01.p
MSKNINRKAKRGTLKQGNILSFVKPQTASDLLKSKDGLKQGRIEPFLRSKKPLQSIKVTP
QKKKRSLSGEAVTSEKQRTVLSKKARMSPSFSKQSPVDIIDLTDFCIEAKSLHPKPTVNQ
QDIATVNVDENLEENIANHEDHLVNCSHNASTPAPLTTNQTFSQTPSSSSINISPAIPPQ
DCEDESQLLNAEQPQQSHISNDIQNNDQQKKTDPKLDTDNCHPFEKEESKLQTSTDDGDN
INDDVSQLPKSEDLNNQSLNMSDLSLNDSFITAALDGSSLDGNDNSKKPEHNLLSCTISS
ASKSHSLTKYRHIVLEVIETSGINGYPIKDLKLENVATKDHVTCTLCDGWYDTKVRVHDI
VNLILDSDIAACGQVKVDSNHNLIVLHPDVLLSGTTVSNAIGCRRRAVLSERFKNTERGD
SSMPVMLIGTLVHTIFQNAVKSRKKFTLDELFSMTEAEVSKPSFLKDIFSQGTTRKTILD
AVKPFLPQIISWIGEYVRDHPTVGVGKLDLKLPPGHIVKELGIDPFASKGKGKTTFEVEA
ALTKVRDIEENVWSPLHGLKGKIDVTGEFTVRRRSREGRSYSAKVVLPLELKTGKDSHSI
EHHAQVAIYSMFCQTRRKNGTKLGTLPAGLLLYMKTKNLSCISLKHEDRRELTILRNNVA
GYLTRSISETEITDTEKSQVSYNTSSFPATIDNERFCKNCSQLRNCSLVHKSIDRNAPDH
SPSTEMLTMMNEMNSHLSKADLDYFEHWTTCTLLEARKSIRKDTNQYIWLRSPEERNCAN
LCVTKLVLAGPATRLDDEGTLLQTFKLTDNSEQKFIEDASNQASLDIFSPGDLVVVSGSE
PHFVGMDMCTVKSVQRSFITVYTERNFSGYPDNMTYSIDRHEWSSLSSSKPLFRNLSVVM
DASPSSARLRDLIISHRQPLFKTSLHEVIPRSSKENVAKMLRGLNRTQRQAIKRVLLSRD
YTLVVGMPGSGKTTTIVAMVRILLLCGCRVLLTSYTHSAVDNLLIKLIKYKVKFLRLGRA
AQIHSSVQPYCDEELTKDFKTVEELNTIYCQANVVGCTCLAVTSHALFTSTVAAKFDVCI
VDEASQIAQPACLAPLLHADRFVLVGDHRQLPPLVRSRKAKSMGADESLFWRLSHHKEAL
SELTLQYRMNSTIMDISNYVTYEGRLECAADFVATASLKLSMWEDTSKQVDALAEELKSW
LLPSLDPDNPVVFLDTSKLEAYEEEIENGICNNAEAEILKTLVEYLLQAGCLPENIGIIA
PFRRQLKTIKEKFDLISDCTDKVEINTVDKYQGRDKSVILMSFVRSRKDEDLGDKKGEIL
SDWRRLNVALTRAKHKMVLVGSRKTLIHYQPCAKLLAYLELKKMMITLTSSS
Nucleotide sequence
Length: 4,305
>Harore.CG.MTP2014.S342.g15120.01.t
AATAACGTCTACCTCGTATACATCTTATCTGGCTTGAAATACTTCATTGAACCTATCACA
GTTTTAGGCGCCTATAATTTGATTTTGCCAGTGTTATGTCAAAGAATATAAACCGTAAAG
CTAAACGAGGAACTTTGAAACAAGGAAATATCTTGTCATTTGTAAAGCCCCAGACGGCGT
CTGATTTGTTAAAAAGCAAAGATGGACTTAAGCAAGGAAGAATCGAGCCTTTTCTTAGGA
GCAAGAAACCTCTACAATCCATAAAAGTAACACCACAAAAGAAGAAAAGATCTTTGTCTG
GTGAAGCTGTGACTTCAGAGAAGCAACGAACAGTATTAAGCAAAAAAGCACGAATGTCTC
CTTCCTTTTCCAAACAATCTCCTGTTGACATCATTGATCTGACAGATTTTTGCATTGAAG
CAAAATCATTACATCCAAAACCTACAGTTAATCAACAAGATATTGCTACTGTTAATGTTG
ATGAGAATCTTGAAGAAAATATAGCAAATCATGAAGACCATTTAGTTAATTGCTCCCACA
ATGCATCAACTCCTGCTCCTCTAACCACCAATCAGACGTTTTCGCAAACTCCTTCATCCT
CCAGTATAAACATCTCTCCAGCTATCCCGCCTCAAGATTGTGAAGACGAATCACAGCTTC
TAAATGCCGAGCAACCTCAGCAATCTCATATTTCCAATGATATCCAAAATAATGATCAGC
AAAAAAAGACAGACCCTAAACTTGATACAGATAACTGTCACCCATTTGAAAAGGAAGAAA
GCAAATTGCAAACCTCAACAGACGACGGCGATAATATTAATGATGATGTCTCTCAGTTAC
CGAAATCTGAGGATCTAAACAATCAATCCTTGAATATGTCAGACCTAAGTTTGAATGACA
GCTTTATTACAGCAGCATTGGATGGATCATCTCTAGATGGAAATGATAATTCGAAGAAAC
CGGAACACAATCTACTATCTTGCACAATCTCTTCTGCGAGCAAGAGTCACTCCCTCACAA
AGTATCGTCATATCGTACTTGAAGTCATCGAAACCTCAGGCATTAACGGCTACCCGATCA
AAGATTTAAAGCTAGAGAACGTGGCAACAAAAGATCATGTGACTTGTACTTTGTGTGATG
GATGGTATGACACAAAGGTCAGAGTTCATGACATTGTCAATCTCATTTTGGATAGCGACA
TTGCAGCATGTGGCCAGGTTAAAGTTGATTCAAATCATAACTTGATAGTCCTTCATCCTG
ATGTTCTGCTGAGTGGAACCACTGTTTCCAATGCGATAGGATGTCGGAGGAGAGCCGTCT
TGTCTGAGCGATTCAAGAACACAGAAAGAGGGGACAGTAGTATGCCGGTGATGCTGATAG
GAACGCTCGTTCACACGATATTTCAAAACGCCGTCAAATCAAGGAAAAAATTCACTCTAG
ATGAACTCTTTAGCATGACTGAAGCAGAGGTTTCCAAACCGTCATTTTTGAAAGATATAT
TTTCACAAGGCACGACTCGCAAAACAATCTTGGATGCAGTGAAGCCATTCTTGCCTCAGA
TCATCTCCTGGATCGGTGAGTATGTTCGTGATCACCCTACTGTTGGTGTGGGCAAACTGG
ATCTAAAACTTCCTCCTGGGCACATCGTCAAAGAGCTTGGCATTGATCCCTTTGCTAGTA
AAGGAAAGGGAAAAACTACTTTCGAAGTTGAAGCCGCTCTTACAAAGGTTCGAGATATTG
AGGAGAATGTGTGGTCTCCTTTGCATGGTCTAAAGGGAAAAATAGACGTCACAGGAGAAT
TTACAGTACGTCGGAGAAGTCGTGAAGGCAGGTCATACTCTGCGAAGGTGGTCCTCCCTC
TTGAGCTTAAAACAGGGAAAGATAGTCATTCCATTGAGCACCATGCACAGGTTGCTATTT
ACTCAATGTTTTGCCAAACAAGAAGAAAGAACGGAACAAAGCTAGGTACTCTTCCTGCTG
GCCTTCTGCTTTACATGAAAACGAAAAATCTTTCATGCATTTCTTTAAAACATGAAGATA
GAAGAGAATTGACAATCTTGAGGAACAATGTTGCTGGCTATCTGACCAGGAGTATCAGTG
AAACAGAGATAACAGATACAGAAAAATCTCAAGTTTCCTACAATACCTCTTCTTTCCCAG
CCACGATCGACAACGAGAGGTTTTGTAAAAACTGTTCACAGCTTCGGAATTGCTCTCTTG
TTCACAAATCCATTGACCGTAACGCACCAGATCATTCCCCATCGACCGAGATGCTAACAA
TGATGAATGAAATGAATTCTCACTTGAGCAAAGCAGATCTTGATTATTTTGAACACTGGA
CAACATGTACTTTGTTGGAAGCAAGAAAATCTATCAGAAAGGACACAAATCAATATATAT
GGTTGAGATCACCAGAAGAAAGGAACTGTGCAAATTTATGCGTAACTAAACTTGTACTGG
CTGGACCTGCGACACGTTTGGATGATGAAGGAACTTTGCTCCAGACTTTTAAATTGACTG
ATAATTCAGAACAGAAATTTATTGAAGACGCATCCAACCAAGCTTCACTCGATATATTTT
CCCCCGGTGATCTCGTTGTCGTAAGTGGGTCGGAACCTCACTTTGTCGGTATGGATATGT
GCACTGTGAAAAGTGTCCAAAGGAGCTTCATCACTGTATATACAGAAAGGAATTTTTCTG
GTTACCCTGACAACATGACATACTCCATCGACCGACATGAATGGTCTTCCCTGAGCAGTT
CTAAACCACTGTTTCGTAACCTTTCTGTAGTCATGGATGCATCTCCGTCATCTGCAAGAC
TCAGAGACTTGATTATAAGCCATAGACAACCTCTGTTCAAAACTAGTCTTCATGAAGTGA
TCCCAAGATCTTCAAAGGAAAATGTGGCTAAAATGTTACGAGGTCTTAATCGCACGCAAC
GGCAGGCAATAAAACGTGTTTTATTATCGAGGGACTACACTCTAGTTGTAGGGATGCCTG
GAAGCGGAAAAACGACAACCATTGTGGCCATGGTGCGAATACTTCTCTTATGCGGATGTA
GAGTACTTCTGACTTCGTACACTCACTCCGCCGTAGACAATCTCCTCATCAAGCTCATTA
AATACAAAGTAAAATTTCTTCGCCTAGGACGAGCGGCCCAGATTCATTCCTCGGTCCAGC
CCTACTGTGACGAGGAGCTAACTAAGGATTTCAAAACAGTTGAAGAACTAAACACGATTT
ATTGTCAAGCTAACGTCGTTGGATGTACTTGTCTTGCAGTAACATCTCATGCACTGTTCA
CCTCCACCGTGGCTGCCAAATTCGATGTATGCATCGTAGACGAGGCCTCGCAGATCGCTC
AGCCAGCTTGCTTAGCTCCGTTGCTCCACGCAGACCGCTTCGTCCTGGTAGGAGATCATC
GGCAGCTTCCACCACTGGTACGAAGCAGGAAAGCCAAATCGATGGGAGCAGATGAAAGTC
TGTTTTGGAGACTTTCTCATCACAAGGAAGCTCTCAGTGAACTTACACTTCAATATAGAA
TGAACAGTACCATTATGGACATCAGTAATTATGTGACATACGAAGGAAGATTGGAATGTG
CAGCAGATTTTGTTGCCACTGCCTCCCTGAAATTATCTATGTGGGAAGACACCTCGAAGC
AAGTGGATGCTTTGGCTGAGGAACTTAAGTCGTGGCTGTTGCCTTCACTGGATCCTGATA
ATCCCGTTGTGTTCCTCGATACTTCTAAGCTTGAAGCTTATGAAGAAGAAATTGAAAATG
GGATTTGTAATAATGCCGAAGCTGAGATTTTGAAGACGCTTGTGGAATACTTATTACAAG
CTGGATGTCTCCCTGAAAACATCGGGATTATTGCTCCTTTTCGAAGACAACTTAAAACTA
TTAAAGAAAAATTTGACTTGATATCAGATTGCACGGACAAGGTCGAAATAAACACCGTCG
ACAAATATCAAGGAAGAGACAAAAGTGTCATCCTTATGTCTTTTGTTCGTTCGAGAAAAG
ATGAAGATCTTGGAGATAAGAAAGGAGAGATCCTTAGCGACTGGCGGAGACTCAACGTTG
CTCTCACCCGGGCCAAGCACAAGATGGTTCTCGTCGGATCACGAAAAACACTAATACATT
ACCAACCGTGCGCAAAACTTTTGGCTTATCTTGAGTTAAAGAAAATGATGATCACCCTCA
CTTCTTCATCTTAATTCAATTGGTCTGTCACTATTCTATACTGTTCTAAATTTCTTTCCA
AAGTGCACTATTTTCCTTCAATACACTGAAACCTTCACAAAGCGT
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RENT1_HUMAN | 29.832 % | 163 | 1.97E-40 |
| SMBP2_HUMAN | 27.802 % | 162 | 1.73E-40 |
| DNA2_HUMAN | 39.67 % | 721 | 0 |