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Transcript Model
Transcript Id
Harore.CG.MTP2014.S343.g12555.01.t
Possible name(s)
UBE2D4; UBE2F; UBE2M
Gene model
Location
S343 [63,856 / 64,408]
Amino acid sequence
Length: 183
>Harore.CG.MTP2014.S343.g12555.01.p
MIKLFSLKQQKKNDESTGTTSGRRVKASAAQLRITKDLNELQLPPTCNTIFPDPNDLLNF
KLIICPDEGFYKGGRFTFTFKVGQGYPHEPPKVKCDVMIYHPNIDLEGNVCLNILREDWK
PVLTINSVIYGLQYLFLEPNPDDPLNKEAAETLTKNRRVFEQNVYKSMRGGYIGSTCFER
CLK
Nucleotide sequence
Length: 552
>Harore.CG.MTP2014.S343.g12555.01.t
ATGATAAAATTATTTTCATTAAAACAACAAAAAAAGAATGACGAGTCCACCGGGACAACT
TCGGGAAGAAGAGTCAAGGCTTCCGCTGCCCAACTGAGAATTACTAAAGATTTAAATGAG
CTACAGCTACCTCCGACGTGTAACACGATATTCCCGGATCCGAACGACCTTTTGAACTTC
AAGTTGATCATCTGCCCTGACGAGGGTTTTTATAAAGGCGGCAGGTTCACGTTCACTTTC
AAGGTCGGTCAGGGCTATCCCCACGAACCCCCGAAGGTGAAGTGCGACGTCATGATCTAT
CACCCGAACATAGACCTCGAAGGCAATGTGTGTCTCAACATCCTCCGGGAAGACTGGAAG
CCCGTGCTCACAATTAACTCTGTCATTTACGGATTACAGTACTTGTTTCTCGAACCCAAT
CCCGATGACCCGTTGAATAAGGAAGCCGCAGAGACCCTAACAAAGAATAGGCGAGTATTT
GAGCAAAACGTCTATAAATCAATGAGAGGTGGGTATATAGGAAGCACGTGCTTCGAACGA
TGTTTGAAGTAA
| SUPERFAMILY |
UBQ-conjugating_enzyme/RWD (IPR016135) - T[11-179] 5.37E-53 |
| Gene3D |
UBQ-conjugating_enzyme/RWD (IPR016135) - T[25-183] 2.5E-62 |
| ProSiteProfiles |
UBQ-conjugat_E2 (IPR000608) - T[32-162] 30.122 |
| Pfam |
UBQ-conjugat_E2 (IPR000608) - T[33-165] 9.3E-39 |
| CDD |
UBQ-conjugat_E2 (IPR000608) - T[33-164] 2.38376E-41 |
| ProSitePatterns |
UBQ-conjugating_AS (IPR023313) - T[100-115] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UB2D4_HUMAN | 40.152 % | 101 | 7.18E-28 |
| UBE2F_HUMAN | 43.671 % | 123 | 7.64E-36 |
| UBC12_HUMAN | 80.874 % | 318 | 1.27E-112 |