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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S8...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S344.g10946.01.t

Possible name(s)

ELMOD1; ELMOD2; ELMOD3

Gene model

Harore.CG.MTP2014.S344.g10946

Location

S344 [67,526 / 74,157]

Sequences

Amino acid sequence

Length: 415

>Harore.CG.MTP2014.S344.g10946.01.p
MDVGEATKGESKPSNSNYNNFLSKEDVNISIGVSSSGNVLSKEVFSVVETTNSPVQYRSQ
DDIDEEEKEAWMKSLEEEQMKWDALESVQYSASGHLKVTALISFSEVLQHFQMKQFDTAD
IKPTIPRTGLSAFIHFLFGPPRLHHSLIEERDLIFCIAQTQLNDQEEIHRRILQTIYKKL
NGTKLDCPRRGSHWQRDDPGTDLRGVGFLGLMHLLHGITDPNVTTLFTEFYRLSLDDEQN
YPFSIVSINVTRIALQVLREEKLSRDCNKRKQVIAVLNDFYIAVFYHFYHIWKTQFKTMK
DSGHVMQDLEKQARKKPRALLQDLENVLKERKTKSKNQIPTVSAEKQTPIYLRRTVSGTS
SASSISESKNISDHSMQIGTESPTRFRAQKKTENLPDFTDIRDAETQRSKQTTDL

Nucleotide sequence

Length: 2,023

>Harore.CG.MTP2014.S344.g10946.01.t
CAAACGATGGGAATACAATTAATTTCCGAAAGTTCCAAAATATACTGATTTTTTTTCGTC
AATATTATTGCACAAGGTTTCCTAGATTGTTTTTGTTGACCGATTCTATAAACCGCATAG
TCAGTTAAAAATTCCTTTGCTAAAATATCATTTGATATTAGGCCGCGTATTTCAAGACGA
TTAAGGTTTTTAGCAAGAGTTTGATACTGTTGCTGGCAGTTAAAACGTACTGATGGATGT
TGGAGAAGCTACCAAGGGTGAATCAAAACCTTCCAACTCGAATTACAACAATTTTCTGTC
GAAAGAAGATGTCAATATATCTATAGGGGTATCTTCAAGTGGTAATGTCTTATCTAAAGA
GGTATTCAGTGTGGTTGAAACCACAAATTCTCCGGTACAGTATCGCTCACAGGATGATAT
CGATGAAGAGGAGAAGGAAGCCTGGATGAAGAGTTTAGAGGAGGAGCAAATGAAATGGGA
TGCACTTGAATCTGTTCAATATTCTGCGAGTGGTCATCTCAAAGTGACCGCGTTGATCTC
GTTCAGCGAAGTCTTGCAACATTTTCAAATGAAACAATTCGACACAGCCGATATAAAACC
AACAATACCAAGGACTGGACTCTCAGCTTTCATCCATTTCTTGTTTGGTCCACCAAGACT
TCATCATTCGTTGATTGAAGAACGGGATTTGATATTCTGCATTGCACAAACTCAACTCAA
TGACCAGGAGGAAATTCATAGAAGAATTCTTCAAACAATCTACAAGAAACTAAATGGAAC
AAAACTGGATTGCCCAAGACGTGGATCTCACTGGCAGAGAGATGATCCAGGAACTGATCT
TCGTGGCGTTGGGTTCCTTGGTCTCATGCATCTTTTGCATGGTATAACTGATCCCAATGT
CACCACGTTATTTACCGAATTTTATCGCCTGTCTTTGGATGACGAACAAAACTATCCATT
TTCTATCGTTTCAATCAATGTAACGCGAATCGCTTTGCAAGTTTTAAGAGAAGAAAAATT
GTCAAGAGACTGTAACAAAAGAAAACAAGTGATCGCAGTGTTGAATGATTTCTACATTGC
TGTTTTTTATCATTTTTATCACATTTGGAAAACGCAGTTCAAAACGATGAAGGATTCTGG
GCATGTAATGCAAGACTTAGAAAAACAAGCACGAAAGAAACCACGAGCGCTACTTCAAGA
TCTCGAGAACGTTCTGAAGGAGCGAAAAACGAAATCGAAAAATCAAATCCCGACCGTGTC
TGCCGAAAAGCAGACGCCAATTTATCTTAGAAGGACGGTTTCTGGTACTTCATCTGCGAG
CAGTATATCTGAATCGAAAAATATAAGCGACCACTCCATGCAGATTGGCACAGAGTCTCC
TACCAGATTCAGAGCCCAAAAGAAGACAGAAAATCTTCCCGACTTCACAGATATCCGTGA
CGCTGAGACACAGAGAAGTAAACAAACCACGGATCTTTAGCTAGTATGGCCTCACTTCTT
ACTGGAGAATAGTAGTTGTACAGCAGCCTAGTATTTAGTGAAAAAATGTTGAAAAATGTC
ATTTGTTGAAAAAATGAACACTGTTTATACAGGTTAAGAATCATTTATCCAAAATCTGAT
TACACTATCAATGTAAAGTAATACATCCTTATATTGTATATATCAACCAAACACTGATAC
AGTTAGTTGGACTGGTAACTAACTACAATATTTTAAATCAACCTTATTGATATTGCACAC
ACGTTTTATAAATTACTGTACTGATTTTATTTGATTGCTGCTGCACCAGTTCTGTGAATG
TTAGCACACAAGTGTTATTGCCTTTTCAATCCCTTTATTAATAATTACTGCACACCATTT
AGACCAGTGGTTCCCAACCTTTTTTTGTCGTGTCCAACTTGAGATATAGTACTTATTCTT
ATATTTTTATTATTTGGAGATATAGTATATGTAAATTGCCAAAAAACTTCTCTCAACGGT
CATTAAATCTTTTAATTATCAAACTATATAACTTTTGCAAAGA

InterProScan

ProSiteProfiles
PH_domain (IPR001849) - T[1-80] 6.764
PANTHER
ELMOD3 (IPR030731) - T[19-359] 2.6E-74
Pfam
ELMO_dom (IPR006816) - T[154-306] 7.8E-25
ProSiteProfiles
ELMO_dom (IPR006816) - T[168-317] 16.973

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ELMD3_HUMAN 40.957 % 250 9.32E-80