- Transcript 'KH2012:KH.C11.232.v1...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S348.g09995.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S348 [10,260 / 11,910]
Amino acid sequence
Length: 378
>Harore.CG.MTP2014.S348.g09995.01.p
MSDCEEDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
SKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,137
>Harore.CG.MTP2014.S348.g09995.01.t
ATGTCTGACTGTGAAGAAGATCAAACCGCCATTGTTTGCGATAATGGATCAGGACTTGTC
AAATCTGGATTTGCCGGTGATGACGCACCGAGAGCTGTTTTCCCCTCCATCGTAGGTCGG
CCGAGACATCAAGGAGTGATGGTAGGCATGGGACAAAAAGACAGTTACGTTGGCGACGAG
GCTCAGAGCAAGAGAGGGATCCTTACTCTCAAGTATCCTATCGAACACGGAATCATCACC
AACTGGGACGACATGGAAAAGATCTGGCACCACACGTTCTACAATGAACTTAGAGTGGCC
CCCGAAGAGCATCCTACTCTTCTTACCGAAGCTCCCTTGAATCCCAAAGCCAACAGGGAG
AAGATGACCCAAATTATGTTCGAAACATTCAATGTTCCAGCGATGTACGTTGCTATCCAA
GCAGTGCTCTCGCTTTATGCATCGGGAAGAACCACAGGTATCGTTTTGGACTCCGGTGAT
GGTGTCTCACACAACGTACCAATATACGAAGGGTACGCCCTCCCACACGCTATTGCCCGA
TTAGATTTGGCCGGTCGTGACTTGACCGACTACTTGATGAAAATCCTCACCGAAAGAGGA
TATTCGTTTGTGACAACAGCAGAAAGGGAGATAGTTCGTGACATAAAAGAAAAACTTTGC
TACGTTGCCCTTGACTTCGAACAGGAAATGGCAACAGCCGCCTCCTCTACATCACTTGAA
AAGAGCTACGAACTTCCCGACGGACAAGTCATCACTATCGGAAATGAGCGATTCCGTTGT
CCAGAGACCCTATTCCAACCTTCTTTTATTGGAATGGAATCTGCTGGAATCCACGAAACG
ACCTATAACTCAATCATGAAATGCGACATTGACATTCGAAAAGATTTGTACGCCAACAAC
GTCCTCTCTGGAGGAACCACAATGTACCCTGGTATTGCAGACCGTATGCAGAAAGAAATC
ACGGCGCTCGCCCCAAGCACAATGAAGATTAAGATAATCGCTCCGCCAGAAAGAAAATAT
TCTGTCTGGATCGGAGGCTCTATCCTAGCGTCACTCTCCACTTTCCAGCAGATGTGGATC
TCAAAGCAGGAATACGATGAAGCCGGTCCTTCCATTGTTCATAGGAAATGCTTTTAA
| PANTHER |
Actin (IPR004000) - T[4-377] 2.3E-266 |
| Pfam |
Actin (IPR004000) - T[7-378] 3.6E-148 |
| SMART |
Actin (IPR004000) - T[8-378] 1.3E-234 |
| PRINTS |
Actin (IPR004000) - T[29-38] 6.7E-58 - T[52-63] 6.7E-58 - T[64-86] 6.7E-58 - T[118-131] 6.7E-58 - T[143-162] 6.7E-58 - T[239-255] 6.7E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.594 % | 768 | 0 |
| ACTS_HUMAN | 97.074 % | 767 | 0 |
| ACTC_HUMAN | 97.594 % | 767 | 0 |