Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S34.g08603.02.t

Possible name(s)

CYB5D2; NENF; PGRMC2

Gene model

Harore.CG.MTP2014.S34.g08603

Location

S34 [407,499 / 408,610]

Sequences

Amino acid sequence

Length: 301

>Harore.CG.MTP2014.S34.g08603.02.p
MALNSTPVVVFLAIILAYFASEKMKDSSGAHEYIPERIARFLNIEPRSVPSHSAKVSNQN
PTSKSSKNSKGTRLFTKNQLWKFYRGGDGSKGLYLAILGRVYDVSKGAAHYGPGGGYDFF
AGRDGTRAFTTGDFTEKGLTDDLTGVTLNDYDGYKNWMDFYEKDYKFVGKLVGRFYDENG
NPTAALKEAEGFMIEAQKVKDLKAENDKKLPPCNSEWTQEKGSRVWCTKLSGGIDRDWVG
VPRLHHPPGESRAHCVCVRDTGPPMMEHSSNRDDNRGDLNYPYLREYKNCDPKANSCKVE
K

Nucleotide sequence

Length: 906

>Harore.CG.MTP2014.S34.g08603.02.t
ATGGCCTTAAATTCTACTCCGGTCGTCGTATTTCTTGCAATAATACTCGCATACTTCGCA
AGCGAAAAAATGAAAGACTCTTCGGGTGCCCATGAGTATATTCCAGAAAGAATTGCAAGG
TTTCTTAACATAGAACCACGTTCGGTTCCTTCACACAGTGCTAAGGTCTCCAACCAAAAT
CCGACTTCCAAATCTTCTAAGAATAGCAAAGGTACCAGACTATTCACGAAAAATCAGCTA
TGGAAGTTTTACAGGGGTGGTGATGGTAGCAAAGGGTTGTATTTGGCTATTTTGGGTCGC
GTCTACGACGTTTCCAAAGGGGCTGCTCATTACGGACCAGGTGGTGGATATGACTTTTTT
GCAGGACGAGATGGAACAAGAGCATTTACCACTGGGGACTTCACTGAAAAAGGATTGACT
GACGATCTGACTGGAGTGACATTGAACGATTATGATGGTTATAAAAACTGGATGGACTTT
TACGAAAAAGATTACAAGTTTGTAGGAAAGCTAGTTGGCAGATTTTACGATGAAAATGGT
AACCCGACTGCAGCACTCAAGGAAGCTGAGGGTTTCATGATCGAAGCACAAAAAGTAAAG
GACCTTAAGGCAGAAAATGACAAAAAGCTTCCACCGTGTAATTCTGAATGGACACAAGAA
AAGGGATCAAGGGTTTGGTGCACTAAACTAAGTGGAGGAATCGATAGGGATTGGGTAGGT
GTGCCAAGACTGCATCATCCACCGGGAGAAAGCCGAGCTCATTGTGTCTGTGTGAGGGAC
ACCGGTCCACCCATGATGGAGCACTCTTCGAACAGAGACGACAACAGAGGGGATTTAAAC
TATCCCTATCTCAGAGAATATAAGAACTGTGACCCTAAAGCGAATTCCTGCAAAGTGGAG
AAATGA

InterProScan

Gene3D	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[71-173] 3.5E-29
SUPERFAMILY	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[72-172] 1.9E-20
SMART	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[75-172] 4.3E-20
Pfam	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[88-139] 4.0E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NEUFC_HUMAN	49.123 %	235	7.11E-77