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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'Haaura.CG.MTP2014.S3...'
  3. Transcript 'Cisavi.CG.ENS81.R206...'
  4. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S353.g10047.01.t

Possible name(s)

DLD; GSR; TXNRD1

Location

S353 [46,378 / 48,037]

Sequences

Amino acid sequence

Length: 552

>Harore.CG.MTP2014.S353.g10047.01.p
MSSRRQFIKLSFFVNANRASLEFNKFFLSDLGQIIISLCVIISITNMLSTKLQTSLIRRF
QRNTLLSASHSCTRTNRFKTTSTQDADLVVIGSGPGGYVAAIKAAQLGMKTVCIEKNPTL
GGTCLNVGCIPSKALLNNSHFYHMAHGKDFASRGIEVGNLSLNLDKMMEQKSSAVSALTG
GIAGLFKKNNIVRVQGHGQIQSPTQVMAVKEDGTNEVINSKNILIATGSEVTPFPGMDID
EETIISSTGALSLKKVPQKLILIGAGVIGVELGSVWSRLGSEVTAVEFLGHVGGMGIDME
VSKSFQRILKKQGINFKLNTKVTTAEKTASGVKVNMEPAAGGVSETLECDVLLVCVGRRP
YTVGLGLENVGVQADQRGMIPVNHRFQTSCPSVFAIGDCIQGPMLAHKAEDEGIICVEGM
TGAPVHIDYNCVPSVIYTHPEVGWVGKTEEDLKKDNIPYKVGKFPFAANSRAKTNADTDG
FVKILSHKETDRILGAHIIGSGAGEMINEAVLAMEYGASAEDVARVCHAHPTLSEAFREA
NLAAYCGKPINF

Nucleotide sequence

Length: 1,659

>Harore.CG.MTP2014.S353.g10047.01.t
ATGTCATCACGGAGGCAATTTATCAAGTTGTCTTTTTTTGTAAATGCGAATCGAGCGAGT
CTTGAATTCAACAAATTCTTTTTGTCAGATTTAGGCCAAATTATTATTTCCCTCTGCGTT
ATCATCTCTATCACTAATATGCTTTCGACGAAACTGCAAACGTCTCTGATACGGCGATTT
CAGAGAAACACACTGCTTAGCGCGTCGCATTCTTGTACTCGAACGAATCGATTTAAGACC
ACATCGACGCAAGACGCAGACCTGGTCGTGATAGGGTCCGGCCCAGGCGGCTACGTTGCC
GCGATCAAGGCAGCGCAATTAGGAATGAAAACGGTGTGCATTGAAAAAAATCCAACTCTA
GGAGGAACTTGTTTAAACGTGGGATGCATTCCGTCCAAAGCTTTATTGAACAACTCCCAC
TTCTACCACATGGCACACGGAAAAGATTTCGCCTCACGAGGAATCGAAGTCGGAAATTTA
TCCCTGAATCTAGACAAAATGATGGAGCAAAAGTCCTCTGCTGTTTCTGCGTTGACTGGT
GGTATCGCCGGTCTTTTCAAAAAGAACAATATTGTTCGTGTGCAAGGACATGGACAGATC
CAGAGCCCCACTCAGGTAATGGCAGTAAAAGAAGACGGGACTAATGAGGTAATTAATTCT
AAAAATATTCTCATTGCTACTGGGTCAGAAGTCACTCCGTTTCCGGGCATGGACATCGAC
GAAGAAACTATAATCTCATCCACTGGGGCGCTCAGTTTAAAAAAAGTTCCACAAAAATTA
ATTTTGATCGGTGCAGGAGTGATAGGAGTTGAACTCGGTTCAGTATGGTCCAGACTTGGA
TCAGAAGTCACTGCTGTCGAGTTTCTAGGTCACGTCGGCGGCATGGGTATCGATATGGAA
GTGTCGAAATCATTTCAGCGTATTCTCAAAAAGCAGGGAATTAATTTTAAATTGAACACA
AAAGTGACTACAGCAGAAAAAACAGCGTCGGGAGTCAAGGTGAATATGGAGCCGGCAGCC
GGGGGCGTTTCGGAGACCCTGGAATGCGATGTCTTGTTGGTTTGCGTCGGCAGGCGGCCC
TACACGGTCGGACTAGGATTAGAGAACGTTGGCGTTCAGGCAGACCAACGCGGCATGATA
CCGGTTAACCACAGATTCCAGACGTCATGTCCCAGCGTATTCGCCATTGGTGATTGTATA
CAAGGTCCTATGCTTGCACATAAAGCCGAGGATGAAGGAATCATCTGCGTAGAAGGAATG
ACTGGGGCCCCGGTGCACATTGATTATAACTGTGTTCCCTCTGTCATCTACACTCACCCA
GAAGTCGGTTGGGTTGGTAAAACAGAAGAAGACTTGAAGAAAGATAATATTCCGTATAAA
GTAGGCAAATTCCCTTTTGCTGCTAACAGCAGAGCGAAGACAAACGCCGATACGGACGGC
TTCGTCAAGATCTTGAGCCATAAAGAAACAGATCGCATCTTAGGGGCACACATTATCGGG
AGTGGAGCTGGCGAGATGATCAACGAGGCTGTGCTCGCCATGGAGTACGGTGCATCTGCC
GAAGACGTCGCACGAGTTTGTCACGCTCATCCTACGCTTTCTGAAGCTTTCAGAGAGGCC
AATCTCGCTGCCTATTGTGGCAAGCCTATCAACTTTTGA

InterProScan

PIRSF
Pyr_nuc-diS_OxRdtase (IPR001100) - T[40-545] 9.4E-96
SUPERFAMILY
FAD/NAD-bd_sf (IPR036188) - T[80-449] 2.59E-60
TIGRFAM
Lipoamide_DH (IPR006258) - T[86-550] 1.5E-163
Gene3D
FAD/NAD-bd_sf (IPR036188) - T[87-231] 2.7E-125 - T[232-356] 2.7E-125 - T[357-414] 2.7E-125
Pfam
FAD/NAD-binding_dom (IPR023753) - T[87-413] 3.7E-68
ProSitePatterns
Pyr_OxRdtase_I_AS (IPR012999) - T[121-131] .
SUPERFAMILY
FAD/NAD-linked_Rdtase_dimer_sf (IPR016156) - T[429-545] 3.44E-44
Gene3D
FAD/NAD-linked_Rdtase_dimer_sf (IPR016156) - T[429-552] 1.9E-48
Pfam
Pyr_nucl-diS_OxRdtase_dimer (IPR004099) - T[432-540] 5.1E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRXR1_HUMAN 26.809 % 146 1.41E-37
GSHR_HUMAN 29.764 % 162 1.78E-43
DLDH_HUMAN 76.333 % 753 0