- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S357.g00312.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S357 [4,656 / 15,402]
Amino acid sequence
Length: 807
>Harore.CG.MTP2014.S357.g00312.01.p
VYHTPLTYIFFNNIRFSSAYTVKMLQLLRLTRPVQNRVFHKFAHELLSVRIPTFIRTFSN
NPNKFREIFLRYSDNKIPKGFEKFFEKSGKAAKRANSNGVKKSANKSPNAESPKESKGSS
KGGSKGKGPSPKSWLSQLLEDPENSKNLQLILGLVVGIGAVYALSSYNNSYALISWNDFV
NKYLSGNLVDRLVVVGGHHAYVYTKTTSGLESQLYFNVGSVEALERNMERVQDDLEIPPS
KRVYIEYKEAHNVWGTVKESIPIILLGVILYSIFFARGKTGSSKGPTSGGGLPGFMNPFK
MGESTARVIQKDQIDISFKDVAGCEEAKIEILEFVNFLKNPKMYEELGAKIPKGAILVGP
PGTGKTLLAKATAGEANVPFISVSGSEFLEMFVGVGASRVRDMFETARKNAPCILFVDEI
DALGKKRSSGKFGGNSEQDQTLNQLLVEMDGFNTVGTNVVVLAGTNRSDVLDPALLRPGR
FDRQIYVGLPDIKGRASIFKVHLTPIKTDLDKNIVARKFAARTSGFSGADIANMCNEAAL
IAARDAATTVKERHFSSALERVIGGIEKKTTVLQPEEKKTVAYHEAGHAVVGWFLQHADP
LLKVSIVPRGKGLGYAMYQPKEQYLLSTEQMMDRMCMMLGGRCAEKVYFNEITSGAQDDL
QKVTKLAYGQVTQFGMSERVGQVSFNMEAGQIQKPFSEATATIIDEEVRNIINVAYERTL
NLITEKKEDVEKVAMRLLEKENLEREDMIELLGPRPFKEKSTYEDFVEGTGSFEEDTTLP
EGLKGWNDDTHETETDEESAKETFPAA
Nucleotide sequence
Length: 2,626
>Harore.CG.MTP2014.S357.g00312.01.t
GTATACCACACTCCACTCACGTATATTTTCTTCAATAATATTAGATTTTCATCAGCTTAT
ACTGTAAAAATGTTGCAGTTACTACGGTTGACGCGGCCCGTTCAAAACCGCGTATTTCAC
AAATTTGCTCATGAATTACTCTCTGTCAGGATACCTACATTCATTAGAACGTTTTCAAAC
AATCCAAACAAGTTTCGGGAGATATTTTTACGTTATTCCGACAACAAGATTCCAAAAGGG
TTTGAAAAGTTTTTTGAAAAATCCGGTAAAGCAGCCAAACGAGCAAATTCCAATGGAGTT
AAAAAGTCTGCAAATAAATCACCGAATGCTGAAAGTCCAAAAGAGAGCAAAGGGTCTAGT
AAGGGTGGATCAAAAGGAAAAGGCCCATCACCAAAAAGTTGGTTGTCACAGTTGCTTGAG
GATCCCGAAAACAGCAAAAATTTACAACTAATTCTCGGATTAGTTGTGGGAATTGGAGCA
GTATATGCTTTAAGTTCTTACAACAACTCATATGCATTGATATCTTGGAATGATTTTGTG
AATAAATATCTTTCTGGCAATTTGGTTGATAGGTTGGTAGTTGTAGGTGGACATCATGCA
TATGTATATACAAAAACAACTTCAGGACTTGAGTCACAATTGTATTTCAATGTTGGTAGT
GTGGAAGCACTTGAAAGAAATATGGAACGAGTTCAAGATGACTTGGAAATTCCTCCATCA
AAAAGAGTTTACATTGAATATAAAGAAGCGCATAATGTATGGGGAACTGTCAAAGAAAGC
ATACCGATAATACTGCTAGGAGTAATATTATACTCCATATTTTTTGCCCGAGGCAAGACT
GGATCTTCGAAAGGGCCGACTTCGGGAGGAGGTCTACCTGGTTTTATGAACCCATTCAAG
ATGGGAGAGTCAACTGCTCGCGTAATTCAAAAAGATCAGATTGATATCTCTTTTAAAGAT
GTTGCCGGCTGTGAAGAGGCCAAAATAGAAATATTGGAATTTGTCAATTTTTTGAAGAAT
CCAAAAATGTATGAGGAGCTTGGGGCTAAAATTCCAAAGGGAGCAATTTTAGTTGGCCCA
CCAGGTACGGGAAAAACATTGTTGGCAAAGGCAACAGCTGGCGAAGCAAATGTACCATTT
ATATCTGTCAGTGGATCAGAATTTTTGGAAATGTTTGTTGGAGTTGGAGCTTCTCGGGTC
CGTGATATGTTCGAAACAGCTCGGAAAAATGCACCATGCATCTTGTTCGTTGATGAAATA
GATGCCCTTGGAAAAAAACGATCCAGCGGAAAGTTTGGTGGAAACAGCGAACAGGATCAA
ACATTAAATCAGTTGTTAGTTGAAATGGATGGATTCAACACTGTCGGTACTAACGTTGTT
GTGTTAGCTGGAACGAATCGGTCGGATGTTCTTGACCCAGCGTTACTACGTCCGGGTCGT
TTTGACCGACAGATCTATGTGGGACTACCGGATATCAAGGGTCGGGCGTCTATTTTCAAA
GTTCATCTGACTCCAATCAAAACAGATCTAGATAAAAATATTGTAGCAAGGAAATTTGCT
GCGAGAACATCTGGATTTTCAGGGGCTGACATAGCTAATATGTGTAATGAGGCTGCATTA
ATAGCTGCAAGGGACGCTGCAACTACTGTTAAAGAAAGGCATTTCTCTTCGGCACTGGAG
CGCGTCATCGGAGGTATTGAGAAAAAGACCACAGTATTGCAACCGGAAGAGAAGAAAACA
GTTGCATATCATGAAGCTGGCCATGCTGTTGTAGGGTGGTTTTTACAGCATGCCGATCCT
CTGCTCAAGGTATCCATTGTTCCACGAGGGAAAGGTCTTGGTTATGCAATGTATCAACCC
AAAGAGCAATACCTTCTTTCAACAGAACAGATGATGGATAGAATGTGCATGATGCTTGGA
GGAAGATGCGCTGAAAAGGTATATTTTAATGAAATTACATCAGGAGCTCAAGACGATCTT
CAGAAGGTTACCAAGCTAGCGTATGGGCAGGTAACACAGTTTGGAATGAGCGAAAGAGTT
GGGCAAGTTTCATTTAACATGGAAGCTGGTCAGATACAAAAACCATTCAGCGAAGCAACT
GCAACCATTATCGACGAAGAGGTTCGTAATATTATAAATGTTGCTTATGAACGTACTTTG
AACCTCATCACAGAGAAGAAAGAAGATGTTGAAAAGGTGGCAATGCGATTACTTGAAAAA
GAAAACCTCGAGAGAGAAGATATGATTGAACTATTGGGTCCTCGACCATTCAAGGAAAAG
TCTACTTACGAGGATTTTGTCGAGGGAACGGGGAGCTTTGAGGAAGACACTACTCTTCCT
GAAGGACTCAAAGGCTGGAATGATGATACACATGAAACAGAGACTGATGAAGAATCAGCA
AAAGAAACGTTTCCTGCCGCATGAAAATCTTGTTATGCAGATTGATGGAAGAGTTACACT
GCTAACTAATTCATGACCGCAGGCCTCTTTAGTAACAAAACAAACAAGAAAACTATCCAT
TTAAATTTTCAGTTAACATTCTCAAGTGATTGTACAAGAACGTAGAACTAATGTCATGAC
GAAAACTTGATTGCCTACTTTGATGAATTATATCAATAAATATCAA
| Hamap |
FtsH (IPR005936) - T[6-761] 32.633 |
| Pfam |
Pept_M41_FtsH_extracell (IPR011546) - T[151-239] 9.9E-7 |
| TIGRFAM |
FtsH (IPR005936) - T[254-752] 3.0E-201 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[314-562] 5.86E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[351-491] 5.3E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[356-488] 2.0E-42 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[459-477] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[552-750] 5.0E-73 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[572-760] 6.93E-67 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 43.158 % | 508 | 3.9E-169 |
| AFG32_HUMAN | 59.586 % | 825 | 0 |
| YMEL1_HUMAN | 43.084 % | 350 | 9.98E-109 |