- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S357.g00312.02.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
S357 [4,694 / 15,940]
Amino acid sequence
Length: 794
>Harore.CG.MTP2014.S357.g00312.02.p
IRFSSAYTVKMLQLLRLTRPVQNRVFHKFAHELLSVRIPTFIRTFSNNPNKFREIFLRYS
DNKIPKGFEKFFEKSGKAAKRANSNGVKKSANKSPNAESPKESKGSSKGGSKGKGPSPKS
WLSQLLEDPENSKNLQLILGLVVGIGAVYALSSYNNSYALISWNDFVNKYLSGNLVDRLV
VVGGHHAYVYTKTTSGLESQLYFNVGSVEALERNMERVQDDLEIPPSKRVYIEYKEAHNV
WGTVKESIPIILLGVILYSIFFARGKTGSSKGPTSGGGLPGFMNPFKMGESTARVIQKDQ
IDISFKDVAGCEEAKIEILEFVNFLKNPKMYEELGAKIPKGAILVGPPGTGKTLLAKATA
GEANVPFISVSGSEFLEMFVGVGASRVRDMFETARKNAPCILFVDEIDALGKKRSSGKFG
GNSEQDQTLNQLLVEMDGFNTVGTNVVVLAGTNRSDVLDPALLRPGRFDRQIYVGLPDIK
GRASIFKVHLTPIKTDLDKNIVARKFAARTSGFSGADIANMCNEAALIAARDAATTVKER
HFSSALERVIGGIEKKTTVLQPEEKKTVAYHEAGHAVVGWFLQHADPLLKVSIVPRGKGL
GYAMYQPKEQYLLSTEQMMDRMCMMLGGRCAEKVYFNEITSGAQDDLQKVTKLAYGQVTQ
FGMSERVGQVSFNMEAGQIQKPFSEATATIIDEEVRNIINVAYERTLNLITEKKEDVEKV
AMRLLEKENLEREDMIELLGPRPFKEKSTYEDFVEGTGSFEEDTTLPEGLKGWNDDTHET
ETDEESAKETFPAA
Nucleotide sequence
Length: 3,126
>Harore.CG.MTP2014.S357.g00312.02.t
TATTAGATTTTCATCAGCTTATACTGTAAAAATGTTGCAGTTACTACGGTTGACGCGGCC
CGTTCAAAACCGCGTATTTCACAAATTTGCTCATGAATTACTCTCTGTCAGGATACCTAC
ATTCATTAGAACGTTTTCAAACAATCCAAACAAGTTTCGGGAGATATTTTTACGTTATTC
CGACAACAAGATTCCAAAAGGGTTTGAAAAGTTTTTTGAAAAATCCGGTAAAGCAGCCAA
ACGAGCAAATTCCAATGGAGTTAAAAAGTCTGCAAATAAATCACCGAATGCTGAAAGTCC
AAAAGAGAGCAAAGGGTCTAGTAAGGGTGGATCAAAAGGAAAAGGCCCATCACCAAAAAG
TTGGTTGTCACAGTTGCTTGAGGATCCCGAAAACAGCAAAAATTTACAACTAATTCTCGG
ATTAGTTGTGGGAATTGGAGCAGTATATGCTTTAAGTTCTTACAACAACTCATATGCATT
GATATCTTGGAATGATTTTGTGAATAAATATCTTTCTGGCAATTTGGTTGATAGGTTGGT
AGTTGTAGGTGGACATCATGCATATGTATATACAAAAACAACTTCAGGACTTGAGTCACA
ATTGTATTTCAATGTTGGTAGTGTGGAAGCACTTGAAAGAAATATGGAACGAGTTCAAGA
TGACTTGGAAATTCCTCCATCAAAAAGAGTTTACATTGAATATAAAGAAGCGCATAATGT
ATGGGGAACTGTCAAAGAAAGCATACCGATAATACTGCTAGGAGTAATATTATACTCCAT
ATTTTTTGCCCGAGGCAAGACTGGATCTTCGAAAGGGCCGACTTCGGGAGGAGGTCTACC
TGGTTTTATGAACCCATTCAAGATGGGAGAGTCAACTGCTCGCGTAATTCAAAAAGATCA
GATTGATATCTCTTTTAAAGATGTTGCCGGCTGTGAAGAGGCCAAAATAGAAATATTGGA
ATTTGTCAATTTTTTGAAGAATCCAAAAATGTATGAGGAGCTTGGGGCTAAAATTCCAAA
GGGAGCAATTTTAGTTGGCCCACCAGGTACGGGAAAAACATTGTTGGCAAAGGCAACAGC
TGGCGAAGCAAATGTACCATTTATATCTGTCAGTGGATCAGAATTTTTGGAAATGTTTGT
TGGAGTTGGAGCTTCTCGGGTCCGTGATATGTTCGAAACAGCTCGGAAAAATGCACCATG
CATCTTGTTCGTTGATGAAATAGATGCCCTTGGAAAAAAACGATCCAGCGGAAAGTTTGG
TGGAAACAGCGAACAGGATCAAACATTAAATCAGTTGTTAGTTGAAATGGATGGATTCAA
CACTGTCGGTACTAACGTTGTTGTGTTAGCTGGAACGAATCGGTCGGATGTTCTTGACCC
AGCGTTACTACGTCCGGGTCGTTTTGACCGACAGATCTATGTGGGACTACCGGATATCAA
GGGTCGGGCGTCTATTTTCAAAGTTCATCTGACTCCAATCAAAACAGATCTAGATAAAAA
TATTGTAGCAAGGAAATTTGCTGCGAGAACATCTGGATTTTCAGGGGCTGACATAGCTAA
TATGTGTAATGAGGCTGCATTAATAGCTGCAAGGGACGCTGCAACTACTGTTAAAGAAAG
GCATTTCTCTTCGGCACTGGAGCGCGTCATCGGAGGTATTGAGAAAAAGACCACAGTATT
GCAACCGGAAGAGAAGAAAACAGTTGCATATCATGAAGCTGGCCATGCTGTTGTAGGGTG
GTTTTTACAGCATGCCGATCCTCTGCTCAAGGTATCCATTGTTCCACGAGGGAAAGGTCT
TGGTTATGCAATGTATCAACCCAAAGAGCAATACCTTCTTTCAACAGAACAGATGATGGA
TAGAATGTGCATGATGCTTGGAGGAAGATGCGCTGAAAAGGTATATTTTAATGAAATTAC
ATCAGGAGCTCAAGACGATCTTCAGAAGGTTACCAAGCTAGCGTATGGGCAGGTAACACA
GTTTGGAATGAGCGAAAGAGTTGGGCAAGTTTCATTTAACATGGAAGCTGGTCAGATACA
AAAACCATTCAGCGAAGCAACTGCAACCATTATCGACGAAGAGGTTCGTAATATTATAAA
TGTTGCTTATGAACGTACTTTGAACCTCATCACAGAGAAGAAAGAAGATGTTGAAAAGGT
GGCAATGCGATTACTTGAAAAAGAAAACCTCGAGAGAGAAGATATGATTGAACTATTGGG
TCCTCGACCATTCAAGGAAAAGTCTACTTACGAGGATTTTGTCGAGGGAACGGGGAGCTT
TGAGGAAGACACTACTCTTCCTGAAGGACTCAAAGGCTGGAATGATGATACACATGAAAC
AGAGACTGATGAAGAATCAGCAAAAGAAACGTTTCCTGCCGCATGAAAATCTTGTTATGC
AGATTGATGGAAGAGTTACACTGCTAACTAATTCATGACCGCAGGCCTCTTTAGTAACAA
AACAAACAAGAAAACTATCCATTTAAATTTTCAGTTAACATTCTCAAGTGATTGTACAAG
AACGTAGAACTAATGTCATGACGAAAACTTGATTGCCTACTTTGATGAATTATATCAATA
AATATCAACTTTGCTGGAACTATCGGACCTTCCCCAAATTACTTCATGAAGAGTCATGAA
ATCGCAAAATCATTTTGAAGGTATAAATAGGCAAACCCAAATCTGTGTAGGTGTTGTTCT
ATTGCTCGTACTACTCTACTCCTACTGGCTGATAAACTTTGCAACAACCACTGTGTGATA
GCTTTCTGAAATTTCGCAGTTAAAACTTTATGATTTTTTTGCTTATGATTATAAAACTCC
TGAAAATAAGTTTTTATTGAAAAGTAAGTTGTTTGAACAACTTTATTCCGAAAGTAACTA
CAAACAGCATGTAAGATGTCACTTCAGCGATGTATTTAAAATTATCTGTTCATGCCGTTG
CATGAAATTCCATAGCATTACAAATATTAGGGTACAGGAAATAACAAATTTGCTTGTAAT
ATGCAATAGTAATACCAACAATGATATTCTTCCGTAAAATCGCTGTCTTTAATTGTTTTA
AGTCAAGCTCTAGCCCAGTGGTTTTCCACCAGAGCCACTTGGCTCCCTACAGGAGGAATT
TAAATT
| Hamap |
FtsH (IPR005936) - T[10-748] 32.616 |
| Pfam |
Pept_M41_FtsH_extracell (IPR011546) - T[138-226] 9.6E-7 |
| TIGRFAM |
FtsH (IPR005936) - T[241-739] 2.8E-201 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[301-549] 5.44E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[338-478] 5.3E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[343-475] 1.9E-42 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[446-464] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[539-737] 4.9E-73 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[559-747] 6.8E-67 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 42.922 % | 508 | 3.68E-169 |
| AFG32_HUMAN | 59.807 % | 825 | 0 |
| YMEL1_HUMAN | 40.365 % | 350 | 4.43E-109 |