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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S359.g05635.01.t

Possible name(s)

PSEN1; PSEN2

Gene model

Harore.CG.MTP2014.S359.g05635

Location

S359 [17,478 / 23,951]

Sequences

Amino acid sequence

Length: 466

>Harore.CG.MTP2014.S359.g05635.01.p
MISDEDEEVNSSINERSSLLLKNKSMSSEVHVETRPRQDSAQLGSDTARSSVRSRQPRNG
EERQNRRTNEQEQEEEEIAMKYGANTVISLFVPVTLCMAVVVATISSVAFYTDQSNQEYL
VYTPFHTEDAATAQVVWETIANALIMIGVIVVMTVVLVLLYKYRCYKVIHGWLVVSSLIL
LFLFAYLYLGEVFRAYNVAMDYITISIVLWNFGVVGMISIHWKGPLLLQQAYLIVISALM
ALVFIKYLPEWTAWLILAVVAIYDIIAVLCPKGPLRILVELAQERNEPIFPALIYSSAMM
WTVTMAHGQDDEPTNRSQRIPTNSSTDDETTGFDASWSRRRMDEVSAEQVIISTDRESRE
NARRRQGPPPPAEEPEDKGVKLGLGDFIFYSVLVGKASASGDWNTTLACFVAILIGLCFT
LILLAIFRHALPALPISIAFGLIYYFSTDYVMRPFMDHISSQQIYL

Nucleotide sequence

Length: 1,938

>Harore.CG.MTP2014.S359.g05635.01.t
CTTTTTCAGTAATTCCGACTTCCCACGCTTCCTATCTTGGGAGTTAACATTTCGAGTTTT
TCTGATAAGTTAAAATAAGACTTTTTTTAAACCATTATCAAAATAAGGCTACATGATATC
AGATGAGGACGAGGAAGTAAACTCGTCGATAAACGAGAGATCAAGTCTTTTATTAAAAAA
CAAAAGCATGTCGTCTGAAGTCCATGTTGAAACTCGTCCGAGACAGGATTCGGCTCAATT
AGGGAGTGACACAGCCAGATCAAGTGTAAGATCAAGGCAGCCTCGAAATGGTGAAGAGCG
ACAGAATCGTAGAACAAATGAACAAGAACAAGAAGAGGAGGAGATTGCTATGAAATATGG
AGCAAATACTGTGATATCTCTATTTGTGCCTGTGACCTTATGTATGGCTGTTGTAGTTGC
CACTATAAGTTCTGTGGCATTTTACACTGATCAGAGTAATCAAGAATATCTCGTCTATAC
TCCATTCCATACCGAAGATGCAGCAACAGCGCAAGTCGTGTGGGAGACTATTGCGAACGC
TTTAATCATGATCGGAGTGATAGTCGTTATGACGGTCGTTCTAGTGCTGTTGTATAAATA
CAGATGTTATAAAGTGATTCACGGCTGGTTGGTTGTTTCATCGCTCATTCTGCTTTTCCT
CTTCGCTTACTTGTATCTCGGAGAGGTTTTTCGCGCATACAATGTTGCCATGGATTACAT
CACGATAAGCATTGTGCTCTGGAACTTTGGGGTAGTTGGCATGATAAGCATACACTGGAA
AGGACCACTGTTGCTCCAACAAGCCTATCTGATTGTTATATCTGCATTGATGGCATTGGT
CTTCATCAAGTACCTTCCAGAATGGACAGCATGGCTCATACTTGCTGTGGTTGCAATTTA
TGATATTATTGCTGTGCTTTGTCCCAAAGGACCATTAAGAATTCTGGTTGAACTTGCTCA
AGAGAGAAATGAACCAATATTTCCAGCATTAATTTATTCATCTGCAATGATGTGGACTGT
TACAATGGCGCATGGACAAGATGATGAACCCACTAACAGAAGCCAGCGAATTCCAACAAA
TTCTTCAACTGATGATGAAACCACAGGGTTTGATGCGTCATGGAGTCGCAGAAGAATGGA
CGAGGTCTCGGCTGAGCAAGTGATTATTTCAACTGATCGTGAATCCCGGGAAAATGCACG
TAGAAGGCAGGGCCCTCCTCCTCCGGCCGAAGAACCTGAAGACAAGGGAGTTAAGTTGGG
ATTGGGGGATTTCATATTCTACAGTGTCCTCGTTGGCAAAGCTTCCGCTTCTGGAGATTG
GAACACAACATTAGCTTGCTTTGTTGCAATTCTGATCGGACTTTGTTTCACATTGATCCT
GCTTGCCATATTTCGACATGCTCTACCAGCATTACCAATTTCCATTGCATTTGGTCTCAT
CTACTATTTCAGTACGGATTATGTGATGAGACCATTCATGGATCATATAAGCTCACAGCA
GATCTATCTCTAACACAGGCTAATGAGGTAACAAAGGAAATGGCCAGATTGCCTCTGTTA
CTGAAAGTTTTTTAAGTATTCATTTATGATTTCTCATTGCTATTGTTTACCGGAATCATT
GTCGTTTCAATCTGTTTTTGGTAGATATTTTGCTGATACCTTGGAATCTGTTCTTTTAAG
GTTTCATTTTATGTTTTCATACATGGTTACTAGATGAAATAATATGATGCAAATTTATGC
TGGAAAATCTTGAATACAGTGGAAGCCTCTTATTATGATCTGGATATGTAATCAAATCGG
GTATTGTTATCAATATTAATCGGTTCCGAAACATTTATATTGTATACCTATCTCTTAATT
AATGTTATCAGCCAGTTAGTGTTATCAATAAGCGGCATCCACTGTGTATTATAATTGTCG
TATTTCTGTGTAAAACTT

InterProScan

PANTHER
Peptidase_A22A (IPR001108) - T[27-465] 4.7E-193
Pfam
Peptidase_A22A (IPR001108) - T[81-456] 1.2E-161
PRINTS
Peptidase_A22A (IPR001108) - T[91-101] 1.1E-20 - T[247-254] 1.1E-20 - T[264-281] 1.1E-20 - T[290-297] 1.1E-20
SMART
Preselin/SPP (IPR006639) - T[137-452] 1.7E-130

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSN2_HUMAN 54.806 % 469 8.58E-164
PSN1_HUMAN 56.681 % 461 4.19E-160