Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S35.g01150.01.t

Possible name(s)

RNF165; ZNRF1; ZNRF2

Gene model

Harore.CG.MTP2014.S35.g01150

Location

S35 [326,237 / 328,280]

Sequences

Amino acid sequence

Length: 214

>Harore.CG.MTP2014.S35.g01150.01.p
MGGKLSSEGEPSHEVRDSSMRPSHANRPETSNGTRLSLGNHQGLRFEPSVFSDNMNASVL
DQRIMRANSVGMNGMAIPHPSGLRFYYNRTMLNSESNESEGRSSAPRSQYVVSQSLPPYL
YSSMLIKDSQCPMCKKVIPADDVEIHFVMCVTKPRVTYNEDIMGSDSGEECAICLDELKE
GENIARLPCLCLYHKGCIDEWFVRSQTCPEHPPD

Nucleotide sequence

Length: 1,190

>Harore.CG.MTP2014.S35.g01150.01.t
GTCACCCGATCGTTATGAGCTTGAACTACAAAACTCAATGTACAAAAACTTTTTCTAGTG
TGTCAGCAAATTTGTAATCAATAAGCATGGGTGGCAAGCTCAGTAGTGAAGGAGAGCCAT
CTCATGAAGTCAGGGACAGTTCGATGAGGCCATCACATGCGAACAGACCGGAAACTTCTA
ACGGGACCAGGCTGAGTCTCGGCAACCACCAAGGACTTCGATTTGAACCTTCTGTATTTT
CGGATAATATGAACGCTTCGGTATTAGATCAGAGAATCATGCGCGCAAATTCCGTTGGAA
TGAACGGCATGGCGATTCCACATCCCAGCGGCTTGAGGTTTTATTACAACAGAACAATGC
TAAACAGTGAATCAAATGAGTCTGAAGGAAGATCTTCTGCTCCAAGAAGTCAATATGTTG
TTTCACAGTCCCTCCCGCCATATTTGTATTCTTCAATGTTGATTAAAGACTCACAATGTC
CAATGTGTAAAAAAGTGATTCCTGCAGATGATGTGGAAATCCATTTTGTCATGTGCGTCA
CCAAACCACGAGTGACCTATAACGAGGATATAATGGGTTCAGATAGCGGCGAAGAATGCG
CTATATGTTTGGATGAATTAAAAGAAGGCGAGAATATCGCGAGACTTCCGTGTTTATGTC
TCTATCATAAAGGTTGCATTGACGAATGGTTTGTGAGGAGCCAGACATGCCCAGAACATC
CACCTGACTAAATCCAGGAATTGACTCATTTACTGTGTTTTCTATCATATGTATAGATGA
TGATTCTCTGATTTTTGATTTCCATTAGTTTCTACTAAGTTTATGTGCAATGCCAATATA
GTGTGGTATATATTATCATGTACCACTTCTTGCTTATATTTAGAAGCTATCATGAATCTA
TGAAATAGTTGTTTCCTTTAAGACTTTCTTGATATTGACCGAAAGGATCTTCTTTTTTCG
CTGAAGCTGATACTGCAATCTTTTGCTATCAAGGTTGAAACCTGTTAAAATATGTGAATA
ATTCATCATTGAGAAATAGAATTTTTTTTTGTGGTTTTAAGCTTTTGCAACTTCTTAATC
GTACAGTATTTTGTGCATACGAAATGAATTATTTCCAATGTATTTTCTTCACTATCACCA
TAACTCGCTTTCACTATGTTCTCAAATGCAACTTTATTTATGTTGTTATC

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[146-210] 3.5E-15
Pfam	Znf_RING (IPR001841) - T[170-209] 3.6E-9
ProSiteProfiles	Znf_RING (IPR001841) - T[171-211] 9.922
SMART	Znf_RING (IPR001841) - T[171-211] 0.001

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ZNRF2_HUMAN	45.833 %	140	1.61E-41
ZNRF1_HUMAN	47.706 %	126	3.83E-36