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TRANSCRIPT CARD

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  1. Molecular Tool 'Irx-C-MO (Imai 2009)'
  2. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S35.g12524.01.t

Possible name(s)

MRPL15

Location

S35 [200,368 / 203,677]

Sequences

Amino acid sequence

Length: 322

>Harore.CG.MTP2014.S35.g12524.01.p
MISIWYICDTVQCSVVSVIISEYEICTVYMHLSTEEFIMSHHKISKILKKSARVTLTNIK
ENPFSLKRPPNRQGQHAQGQASKGYSNIKPRIGYEEKTPFVKLIPKYGYNRDSHLQREYL
PLTLWQLQRMIDLGRIDPSEPIDLTTLVNSRALYRNINSKHYGVFLVEQGADIFKAKVNI
EVQISNEMSVAAVERNGGTITTAFFDLKSVYALTRPVEYFLQGNPVHKRLLPPQELVTYY
TDPNTRGYLSDPAQLQLARVELAQKYGYQLPDLTKDECYEMLMMRKDPRQVFFGISPGWL
INLQDKTVIKPEAEYIKNYLRL

Nucleotide sequence

Length: 969

>Harore.CG.MTP2014.S35.g12524.01.t
ATGATCTCTATCTGGTATATATGTGATACTGTTCAATGTTCTGTGGTATCTGTGATTATC
TCTGAATATGAGATATGTACTGTCTATATGCATTTATCCACGGAAGAATTTATCATGTCT
CACCATAAAATATCTAAAATTCTTAAGAAATCGGCAAGGGTGACATTAACTAACATTAAA
GAGAATCCGTTCTCGCTGAAGAGGCCTCCGAATCGTCAAGGGCAGCATGCGCAAGGTCAG
GCTTCTAAGGGTTACAGCAACATAAAACCAAGGATTGGCTACGAAGAGAAAACTCCGTTT
GTTAAACTTATACCCAAGTATGGATACAACAGGGATTCCCATTTACAACGGGAATATTTG
CCTTTGACGCTTTGGCAGCTGCAGAGGATGATCGACCTCGGAAGAATTGATCCTTCAGAA
CCGATTGATTTGACCACCCTAGTAAATTCTCGTGCGCTCTATAGAAATATCAACTCCAAG
CATTACGGAGTATTCTTGGTCGAGCAAGGAGCCGACATATTCAAGGCCAAGGTTAATATT
GAAGTGCAGATATCGAATGAGATGTCAGTTGCGGCTGTGGAACGAAACGGGGGCACAATC
ACGACAGCGTTCTTCGATCTCAAGAGCGTATATGCACTTACTCGACCCGTGGAGTATTTT
CTTCAAGGTAATCCAGTCCACAAACGACTTCTGCCACCACAGGAACTTGTAACATATTAC
ACGGACCCAAACACAAGAGGATACCTCAGTGACCCAGCCCAACTTCAATTGGCAAGGGTC
GAACTGGCTCAAAAGTATGGCTACCAGCTTCCGGATCTAACAAAGGATGAATGTTATGAA
ATGCTGATGATGAGAAAAGATCCAAGACAGGTTTTCTTTGGAATTTCTCCTGGTTGGCTT
ATCAACCTTCAAGATAAAACTGTGATCAAGCCAGAAGCCGAATATATAAAAAATTACCTG
CGGCTATAA

InterProScan

PANTHER
Ribosomal_L15_bac-type (IPR005749) - T[43-289] 3.9E-62
Pfam
Ribosomal_L18e/L15P (IPR021131) - T[74-201] 2.3E-11
SUPERFAMILY
L18e/L15P_sf (IPR036227) - T[82-208] 2.75E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RM15_HUMAN 50.883 % 292 1.38E-98