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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S4...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S367.g07172.02.t

Possible name(s)

CHL1; L1CAM; NRCAM

Gene model

Harore.CG.MTP2014.S367.g07172

Location

S367 [63,206 / 67,089]

Sequences

Amino acid sequence

Length: 256

>Harore.CG.MTP2014.S367.g07172.02.p
MITSFYLGWIIVALGTSVSKAVHIPAEVPRPPTIIEQTEGITYALQKLEVRLKCLADALP
NVKESKGYYWKKDGEVITNITQEDDLTNNSSIVMSKYNGTIWIRGSANFTTENLLPYEGK
YQCFASNERGTAMSRFIYLKVAKKVSYIVPADKTIKVTEGESKKIACRQNNAEDIETWWN
FLPDTVKLSNRIAKAPDGTIVFSNIVAQEDNGLKFYCTLKHLPTRTSRDGPHYTLSVKPV
SPVQSEPTLSQLDKLL

Nucleotide sequence

Length: 771

>Harore.CG.MTP2014.S367.g07172.02.t
ATGATTACTTCTTTTTATCTTGGTTGGATAATTGTAGCGCTTGGTACGTCTGTGAGCAAG
GCCGTTCACATCCCTGCCGAAGTACCTCGACCGCCAACAATCATAGAACAGACCGAAGGA
ATAACGTATGCCCTGCAGAAATTAGAAGTAAGACTAAAATGTCTGGCAGATGCACTACCA
AATGTAAAGGAATCTAAAGGGTACTACTGGAAAAAAGACGGGGAAGTTATTACGAATATC
ACACAAGAAGACGACCTAACCAACAACAGCTCTATCGTTATGTCGAAATACAACGGTACC
ATTTGGATAAGAGGAAGCGCAAACTTTACCACTGAGAATCTGCTGCCTTACGAGGGAAAG
TATCAATGTTTTGCTAGTAACGAAAGAGGAACTGCTATGTCAAGATTTATTTATTTGAAA
GTCGCCAAAAAGGTTTCATACATCGTTCCAGCAGACAAAACCATAAAAGTCACAGAGGGC
GAATCTAAAAAAATAGCTTGTCGGCAAAATAACGCAGAAGACATTGAAACTTGGTGGAAT
TTTTTACCCGATACTGTGAAGCTATCTAACCGAATTGCGAAGGCTCCGGACGGGACGATA
GTATTTTCGAATATTGTAGCACAGGAGGACAACGGTCTGAAGTTTTATTGTACTCTGAAA
CATCTACCAACACGAACATCACGAGATGGTCCACATTACACCCTCTCTGTTAAGCCAGTT
TCTCCTGTACAGTCAGAGCCGACTTTAAGCCAATTGGACAAGTTGCTCTAA

InterProScan

Gene3D
Ig-like_fold (IPR013783) - T[17-141] 3.3E-13
ProSiteProfiles
Ig-like_dom (IPR007110) - T[25-134] 8.702 - T[150-236] 6.76
SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[31-142] 1.8E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value