- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S36.g05022.01.t
Possible name(s)
ASH1L; PHF20; PHF20L1
Gene model
Location
S36 [94,967 / 112,696]
Amino acid sequence
Length: 1,550
>Harore.CG.MTP2014.S36.g05022.01.p
MDDIYKDLELIKKGAETDKESTLDGDEKKNPSKEKKKTEEPMNKKVKADKSSNETAVASK
MPVVAKKRAKTMSPGQIRSDLKGKTKSRKSVGVSKNSPSLGKIKMIKKQEPKKNEKKSDK
RVTESKESKSLKKEKDKPADSIPASPAIRVKGSIDPNATPIVGIRFDEGAKIEAVDSGNW
YKARIVKVDQENMDILVHFDGWGARFDTWFPMTSTLIRGRTQLDSKPDMPVYDAGEDVLA
KWTDGNFYPATVLNVKDSGSCLVMYFDGMKKLLRPNIMKKMSEGEKETAMKAVEKLFMVP
PAESSSEGEKPAVKVSYRRYRTSADDRGKRASRNERPSEEALSTDKAPGKKAVKRKASQI
SVADEKTKADESPDKPESKTSGDIFHAKKARLDKITHNLLDRVSPTSDSVLHCIHKSVFV
YKAVEKDMNEDSDSPLVIDEDSQSKQMKKRKLKESKTREKVEGARGPRGGHVLKISKTNN
TSLAKKLQEDEKAQGLAEESGEENLHQLADAALSSPAVSASEEAKISEETTTPEIQTNTE
PIKAASEALLQLSQGFTSTDTIPSVTQATSQSSVTDTKQSLPSVSSSIGSAENSTEVVKK
EAVKNDEIEGTDLQENTTGKKSTEDTTENSNLSKARPVYKKGDTVLAKWADCRSYLAYIL
RRETGDSYKIRYYDGMVKIVKSSLIHPWVGPLPASLKTFNPTVKESPSMKQRSRSSDTKI
SQEKQKAEVRGRTASLPVKEDESKVTAKGSQLSPQGSGEHIQYRAEEKVLAKWIDSKWYP
ATVIHRTNADHYRIKYSGGITKIVNDTWLTPWKPPSQSKSGKKIEGTEISQISWVTDSLA
GEGDEESHADVGGESNKSKEDCVAPKSEQMNEGGEFYVGQSVLARWTDCRSYPATVKKVQ
ADGRCTVVYYDGMDRTLKPSMLKPWNPASFPSKPGGTRDEDISKNRLRTRVSSQDNKATQ
HKEPSLPRQVVRGYDAYYARLPPASKEFVVETDHNKFKCRVPGCTKSFRKEQLLRQHHKY
YHQQRYKLRDQESPTPVAKRRSSKEDSIPKRRVSADYEAISKGLDATGFPVVRISDIGNG
DNLPPTVRSRGAKPPMDIYKKQQGDITLSSTSSLLDSSSGVDDGNQNEKTKSSKESVHIF
NQDAQIASLEARSKRKRKRQLSAQYSPKSDALKTDDFVDSKTTSPISPLPDESETVNEDV
IRCVCGVEEEEGFMIQCEGCFTWQHAACVGFDSPNTSAQKDKKKSMEENVSSKTEDSKLD
TLPGDENIADAVSKVVDSYVCWVCKNPQNVRRSCQYLYNSDFLAKGKLPSLANPNGSAED
IATVNSKKSFEFMMMALHQVIDEVVKMQEALQGIKQKIKMVSDPTDHPLLKTWEDSSNST
SISAEEVIIAENSDQATDNANQHSDNLALPNVTVMEGVSKEEGIDSVPTVADPKITDVEG
SPGRIEEHLISSNGNENSRTPKKMKKVAERAGSRKRGTEDDFEVDVELCRENLLSHIIGL
EKTLDQRLTQLEDYVSNIDWPENEDPEIDNADIEKLQDDLTAVQKLLSYC
Nucleotide sequence
Length: 5,522
>Harore.CG.MTP2014.S36.g05022.01.t
GTATTAAGGTATATTTAGGGCACTATCGTTATCTCTGAATTACTTACCTTTTAGGCAGTA
GTACAAGAAGTGAACTGAACCAAGAATTTCTCAAGGAAGATGGATGATATATACAAGGAT
CTTGAGCTCATAAAAAAGGGAGCAGAAACAGATAAAGAATCTACTCTTGATGGTGACGAG
AAAAAAAATCCTAGTAAAGAGAAGAAAAAGACAGAGGAGCCAATGAATAAGAAAGTTAAA
GCTGACAAATCTAGCAATGAGACGGCTGTTGCTTCTAAAATGCCAGTTGTTGCCAAAAAA
AGAGCCAAAACTATGTCACCGGGACAAATACGATCAGATTTGAAAGGAAAAACTAAATCT
CGCAAAAGTGTTGGTGTATCTAAGAATTCTCCTTCGTTGGGGAAGATCAAGATGATAAAG
AAGCAGGAACCTAAAAAAAATGAGAAAAAATCTGACAAAAGAGTAACGGAATCGAAAGAG
AGCAAATCGCTGAAAAAAGAAAAAGATAAGCCTGCGGACAGCATACCTGCGTCGCCTGCT
ATACGGGTTAAAGGTTCGATTGATCCAAACGCTACTCCGATTGTAGGAATAAGGTTTGAT
GAAGGAGCTAAAATCGAAGCTGTTGACAGTGGCAATTGGTACAAAGCAAGAATTGTCAAG
GTTGATCAGGAAAATATGGATATCCTGGTACATTTCGATGGATGGGGTGCCCGATTCGAT
ACATGGTTTCCAATGACAAGCACGCTGATTAGGGGACGAACACAACTTGATTCCAAGCCT
GACATGCCAGTATACGACGCTGGTGAGGATGTCCTTGCAAAATGGACAGATGGGAATTTC
TATCCTGCTACAGTCTTGAATGTTAAGGATTCAGGCTCTTGTCTTGTTATGTACTTTGAT
GGGATGAAGAAATTATTGAGACCTAATATAATGAAGAAAATGTCAGAGGGTGAAAAGGAA
ACGGCCATGAAGGCCGTTGAGAAACTTTTCATGGTGCCACCTGCTGAAAGTTCAAGCGAG
GGTGAAAAACCAGCTGTAAAGGTTTCTTATCGCAGATATAGAACTTCAGCTGATGATAGA
GGGAAAAGGGCTTCCAGAAATGAAAGGCCTTCAGAAGAAGCTCTCAGTACTGACAAAGCT
CCAGGGAAAAAGGCAGTTAAGAGGAAGGCATCTCAAATTAGTGTCGCAGATGAGAAAACC
AAGGCTGATGAATCTCCAGACAAACCTGAAAGTAAAACCTCTGGTGATATATTTCATGCA
AAAAAAGCTCGCCTAGACAAAATAACACATAACCTTCTGGATCGCGTCTCACCTACATCA
GACAGTGTCTTGCATTGTATCCATAAGAGTGTTTTTGTTTATAAAGCTGTGGAAAAGGAT
ATGAATGAGGATTCTGACAGCCCTCTTGTGATTGATGAAGATTCTCAAAGCAAACAAATG
AAAAAACGAAAACTAAAAGAGTCCAAAACTAGGGAAAAAGTAGAGGGTGCAAGGGGTCCT
CGTGGTGGGCATGTCTTGAAAATCAGCAAAACTAACAATACTTCACTTGCTAAAAAATTA
CAAGAGGATGAAAAAGCCCAAGGGTTAGCAGAAGAAAGTGGAGAAGAGAATTTACACCAG
TTAGCTGATGCTGCACTGTCATCACCTGCTGTCTCGGCATCTGAGGAGGCAAAAATATCT
GAAGAAACAACCACACCGGAAATTCAAACAAATACAGAACCTATTAAAGCAGCTAGTGAA
GCTTTATTGCAGCTTTCGCAAGGTTTCACTTCAACAGATACTATTCCAAGTGTTACTCAA
GCTACGAGTCAGAGCTCTGTAACAGACACTAAACAATCGTTGCCATCGGTAAGTTCAAGT
ATCGGTTCAGCAGAAAACTCAACTGAAGTAGTTAAGAAGGAAGCTGTCAAAAATGATGAA
ATCGAAGGCACAGACTTGCAAGAGAACACAACTGGTAAGAAAAGTACAGAAGATACCACT
GAAAATAGCAATTTGAGCAAAGCTCGACCAGTCTATAAGAAAGGAGATACTGTTTTGGCT
AAGTGGGCAGACTGTAGATCATACCTGGCGTACATTTTGCGAAGAGAAACAGGAGATAGC
TACAAAATTCGTTACTATGACGGCATGGTCAAAATAGTAAAATCATCCTTGATTCATCCA
TGGGTTGGCCCACTACCGGCTTCCTTAAAGACCTTCAATCCCACTGTCAAGGAAAGCCCT
TCCATGAAACAAAGAAGTAGGTCTAGTGACACAAAAATCAGTCAAGAAAAGCAAAAGGCT
GAAGTTAGAGGTAGAACAGCATCCTTACCAGTAAAAGAAGATGAATCCAAAGTAACAGCA
AAGGGAAGTCAACTTTCACCCCAAGGTTCCGGTGAACACATTCAATATCGAGCTGAGGAA
AAAGTTTTAGCCAAGTGGATAGATTCCAAGTGGTATCCTGCAACTGTTATTCATCGAACG
AATGCTGATCATTATAGAATAAAGTATAGTGGTGGTATAACAAAGATTGTGAATGACACC
TGGCTTACTCCTTGGAAACCACCAAGTCAAAGTAAAAGTGGCAAGAAAATCGAAGGCACT
GAGATTAGCCAAATATCTTGGGTCACTGATTCTTTAGCTGGCGAAGGTGACGAAGAAAGC
CATGCTGATGTGGGAGGAGAATCTAACAAATCCAAGGAGGATTGTGTTGCACCCAAATCA
GAGCAGATGAATGAAGGTGGTGAGTTTTATGTTGGACAGTCTGTGCTGGCACGTTGGACT
GACTGTCGCAGTTATCCCGCAACGGTTAAAAAAGTTCAAGCCGATGGAAGATGTACTGTT
GTATACTACGATGGAATGGACCGGACTCTAAAACCTTCCATGCTAAAACCTTGGAACCCA
GCCTCCTTTCCATCCAAACCAGGTGGTACAAGGGATGAAGATATATCTAAAAACAGGCTA
CGAACAAGAGTTTCCTCACAGGATAACAAAGCAACACAACACAAAGAACCCAGTTTGCCT
AGACAAGTGGTTCGAGGCTATGATGCTTATTATGCTAGACTGCCCCCAGCTTCGAAAGAG
TTTGTGGTTGAAACAGATCATAACAAATTCAAATGCCGAGTTCCAGGTTGCACGAAGTCC
TTTAGAAAAGAACAGCTACTGAGACAGCACCATAAATACTATCATCAACAGAGATACAAA
CTGCGCGATCAGGAATCACCCACACCTGTTGCGAAACGTAGAAGTTCAAAGGAGGATTCG
ATACCTAAGCGACGTGTCTCTGCCGATTATGAAGCCATTTCTAAGGGACTTGATGCGACC
GGTTTCCCCGTTGTCAGAATAAGTGATATCGGAAATGGGGATAATTTACCGCCGACCGTA
CGTAGTAGGGGTGCCAAACCTCCAATGGACATCTACAAAAAACAGCAGGGAGATATCACC
TTGTCTTCAACATCTTCATTGCTGGATAGCAGTAGTGGGGTTGATGATGGAAATCAAAAT
GAGAAAACAAAATCTTCGAAGGAATCGGTGCATATTTTCAATCAGGACGCACAAATAGCC
TCCCTGGAAGCAAGATCCAAGCGAAAAAGGAAAAGACAACTTAGTGCTCAATACAGTCCT
AAAAGTGATGCTTTGAAAACAGATGATTTTGTGGATTCTAAGACAACCTCACCCATTTCC
CCTCTTCCTGATGAGTCAGAAACTGTGAATGAGGATGTGATTCGTTGTGTTTGTGGGGTG
GAAGAAGAGGAGGGCTTCATGATACAGTGTGAAGGATGCTTCACTTGGCAGCATGCCGCT
TGTGTTGGCTTCGACTCTCCCAACACCTCTGCACAAAAAGATAAAAAGAAATCCATGGAA
GAAAATGTGTCTTCCAAAACTGAGGATAGTAAACTGGACACTCTGCCAGGAGATGAAAAT
ATTGCAGATGCTGTAAGCAAAGTTGTTGACAGTTATGTTTGCTGGGTTTGTAAAAATCCT
CAGAACGTTAGAAGATCTTGTCAGTATCTGTATAACAGTGATTTCTTGGCCAAAGGCAAG
TTGCCATCTCTTGCCAATCCTAATGGTTCTGCTGAGGATATTGCTACAGTCAATTCGAAG
AAGTCATTTGAATTTATGATGATGGCTCTTCATCAAGTCATAGATGAAGTTGTCAAGATG
CAAGAAGCGCTTCAAGGGATTAAGCAGAAAATAAAGATGGTTTCCGATCCCACAGACCAT
CCGCTCTTGAAAACTTGGGAAGATAGCAGTAATTCCACAAGCATATCTGCAGAGGAAGTT
ATCATTGCGGAAAATAGCGATCAAGCTACAGATAATGCCAACCAGCACTCAGATAACCTT
GCCTTACCAAATGTTACAGTTATGGAAGGTGTGTCCAAAGAGGAAGGTATTGATTCTGTA
CCAACAGTTGCCGATCCAAAAATTACAGATGTAGAAGGAAGTCCAGGTAGAATTGAAGAA
CATCTGATTTCTAGCAATGGAAATGAAAATTCTAGGACACCTAAGAAGATGAAAAAGGTA
GCAGAGAGGGCTGGTAGCAGAAAAAGGGGAACAGAAGATGATTTCGAAGTAGATGTAGAA
CTCTGTCGTGAGAACTTGCTCAGTCACATTATTGGTCTGGAAAAAACATTGGACCAGAGA
CTCACACAATTGGAAGATTATGTGTCAAACATCGACTGGCCTGAAAATGAAGATCCGGAA
ATTGATAATGCAGATATAGAAAAGCTCCAGGATGATTTGACTGCTGTTCAAAAACTCCTT
TCATATTGCTAGATTAGCAGAGAATGTTGATCAGAAATGATGGAAGGTTTATCAACCAAG
AATGGATTGTACTTTGGATTTTGGCAAGTCATAATCCAAGTTGATAAAATGGTTGTAGGC
AACTGCTCGGATTGGCAAGGATGTTGTTGATGATTGTTGTTAATATGTTTATATTATCCT
TTTTATTTGTTGTGTATTTAATGGTTTTATTGCATTGAGGTTATGAATAACCACTGTTGC
AGGAAAGTATGTTTTTATTTCTTTTGATAATGTTGTTCAACTTCAGGAAATGTGTCTTGG
GTATTAATTGTTAGATTTCAGATACAGATCTGTTTTTTTTTGTAATATGTTATCATCAGA
AAGGCAACCTAGTTCACCCTATACAAGTAGAAGACAGTATCTCGGCAGTGATGATGATAT
GATTACTGTCAAGTTTGTCAGTTCTCTTCAGTGACTACAGTACTGTGGAATATCGCCTGA
ACACATTCTTGAATATCCTGTAAAAGTGGGATTCACATCTGATCTTCTGACAAAATGGCA
TATCAGTGTCATGGATAATAAATAAAAATAGAAGGAATGGAATGTAATTAATCTATGGGA
AAAGATTTAGGATTGGCAATGTTTCGCCTTTGCGTGATTCCCACATGTAAAAGACGGCCA
TCCTGCCAGAATTCACATGATTCAAAGAATCGTTTGCCATGTTGAATCTTCAGACTGATT
CAATGTCACTCCTTCAAAAACGCCTGTGTACCAATAAACAAAACGACCCGCGAAATTGAG
TA
| PANTHER |
PHF20 (IPR037915) - T[17-140] 2.1E-88 - T[162-575] 2.1E-88 - T[636-733] 2.1E-88 - T[760-814] 2.1E-88 - T[874-963] 2.1E-88 - T[982-1231] 2.1E-88 - T[1275-1387] 2.1E-88 |
| SMART |
Mbt (IPR004092) - T[133-230] 8.7E-4 |
| SUPERFAMILY |
Chromo-like_dom_sf (IPR016197) - T[164-218] 1.04E-11 |
| SMART |
Tudor (IPR002999) - T[164-223] 0.36 - T[230-286] 1.0E-9 - T[637-693] 2.0 - T[761-818] 12.0 - T[874-930] 2.9E-7 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[997-1027] 10.45 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[999-1022] . |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1191-1249] 1.7E-13 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[1194-1237] 4.21E-11 |
| SMART |
Znf_PHD (IPR001965) - T[1202-1285] 8.6E-8 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[1202-1240] 9.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P20L1_HUMAN | 36.364 % | 95.9 | 1.13E-19 |
| PHF20_HUMAN | 29.688 % | 94.7 | 2.64E-19 |