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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S36.g08103.01.t

Possible name(s)

SMYD1; SMYD2; SMYD3

Location

S36 [420,580 / 423,824]

Sequences

Amino acid sequence

Length: 463

>Harore.CG.MTP2014.S36.g08103.01.p
MTYRLSALRSNLGSWWCFSPKQSLSFEMLEVFYTQERGRGLKSNAAIRRGTVLMTSEPFI
YLLTTSQKGIRCDHCFQKQETLLRCSGCKFMRYCDKNCQRGAWSQHKQECAALKRVSPKI
PPDFVILLSRVLWKLENSMEDNKTEDLVSIMDLESNYDRLTEGQKESLGQFVIILHSFWG
LGKLPLQVPDIKAVLELCAKLKNNCFAICDEELQSDIGTGVYLSCSLLNHSCVPNCIAVF
DQLQLNVRAIRDINEDEELFISYVDQLAPSDERQEEIENIYRFKCECPSCKDKINDSKML
CDFNNKTLCYNSSKITSVKEFLDQLNKARKAGNYGQLRDLAAGYIQREVLPINNVYMAKV
LDYSMDACIQLQKFEEAFQHGVLALNVYRAYLNDIHPLTGLQLMKLGKILLWNMKNEEAI
QMLLEALKVLQITHSHKGEVMHELRTLIEQCQVEIRHKSKRKS

Nucleotide sequence

Length: 1,392

>Harore.CG.MTP2014.S36.g08103.01.t
ATGACATATAGATTGAGTGCATTGCGATCTAACTTAGGCAGTTGGTGGTGCTTCAGCCCT
AAGCAAAGCCTAAGTTTCGAAATGCTGGAAGTGTTCTATACGCAAGAACGAGGAAGGGGC
CTGAAATCCAATGCTGCTATAAGAAGGGGCACTGTTTTAATGACCTCAGAGCCTTTCATT
TATCTGCTTACAACCTCACAGAAAGGAATAAGATGTGATCACTGTTTTCAGAAGCAGGAA
ACTTTGCTGCGATGTTCTGGATGTAAATTCATGAGATACTGCGATAAAAATTGCCAGAGA
GGAGCATGGTCACAGCACAAACAAGAGTGTGCTGCATTAAAAAGGGTCTCGCCAAAAATT
CCACCGGATTTTGTCATTTTACTATCGCGAGTTTTGTGGAAGCTGGAGAATTCTATGGAG
GATAATAAAACAGAAGATCTGGTATCAATTATGGATCTAGAATCAAACTACGACAGACTG
ACCGAAGGACAAAAGGAAAGCTTAGGACAGTTTGTTATCATATTACATTCCTTCTGGGGG
CTTGGAAAATTACCTCTGCAAGTTCCTGATATCAAGGCAGTGTTGGAATTGTGTGCAAAG
TTAAAAAACAATTGCTTTGCAATATGTGATGAGGAGCTTCAATCAGACATCGGAACAGGG
GTGTATTTAAGTTGCAGTCTGCTTAATCACAGTTGTGTTCCAAACTGCATTGCAGTATTT
GACCAGTTGCAACTAAATGTAAGAGCCATCCGAGATATAAATGAGGATGAAGAACTATTT
ATCTCCTATGTGGACCAGTTAGCACCCAGCGACGAGAGACAAGAGGAAATCGAAAATATA
TATAGGTTCAAGTGCGAGTGTCCTTCTTGCAAAGATAAAATAAATGATAGCAAAATGTTA
TGCGATTTTAACAACAAAACACTTTGCTACAATTCGTCGAAAATTACATCGGTGAAAGAA
TTTTTAGATCAACTGAACAAAGCAAGAAAAGCGGGAAACTACGGACAATTGAGAGATTTA
GCAGCGGGTTATATTCAAAGAGAAGTCCTGCCTATAAATAATGTGTACATGGCAAAGGTA
CTCGATTACTCAATGGATGCGTGTATACAACTTCAAAAATTTGAGGAGGCATTCCAGCAC
GGTGTGTTAGCTCTAAACGTGTACAGAGCTTATCTCAATGATATCCATCCACTAACTGGA
CTCCAGTTGATGAAGCTAGGAAAAATACTACTCTGGAATATGAAAAATGAGGAAGCCATA
CAAATGCTTTTAGAGGCACTCAAAGTCCTTCAGATCACGCATAGTCACAAAGGAGAAGTG
ATGCATGAGCTTCGAACGCTCATTGAACAATGTCAAGTTGAGATCAGACACAAAAGTAAA
CGGAAAAGTTAA

InterProScan

SMART
SET_dom (IPR001214) - T[27-270] 1.3E-5
ProSiteProfiles
SET_dom (IPR001214) - T[27-264] 14.234
Pfam
SET_dom (IPR001214) - T[38-263] 1.6E-11
ProSiteProfiles
Znf_MYND (IPR002893) - T[72-110] 11.871
ProSitePatterns
Znf_MYND (IPR002893) - T[72-110] .
Pfam
Znf_MYND (IPR002893) - T[72-110] 9.9E-10
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[384-463] 4.3E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMYD3_HUMAN 37.123 % 276 2.3E-88
SMYD1_HUMAN 28.381 % 200 7.96E-59
SMYD2_HUMAN 27.483 % 191 5.04E-56





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