- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S36.g08103.01.t
Possible name(s)
SMYD1; SMYD2; SMYD3
Gene model
Location
S36 [420,580 / 423,824]
>Harore.CG.MTP2014.S36.g08103.01.p
MTYRLSALRSNLGSWWCFSPKQSLSFEMLEVFYTQERGRGLKSNAAIRRGTVLMTSEPFI
YLLTTSQKGIRCDHCFQKQETLLRCSGCKFMRYCDKNCQRGAWSQHKQECAALKRVSPKI
PPDFVILLSRVLWKLENSMEDNKTEDLVSIMDLESNYDRLTEGQKESLGQFVIILHSFWG
LGKLPLQVPDIKAVLELCAKLKNNCFAICDEELQSDIGTGVYLSCSLLNHSCVPNCIAVF
DQLQLNVRAIRDINEDEELFISYVDQLAPSDERQEEIENIYRFKCECPSCKDKINDSKML
CDFNNKTLCYNSSKITSVKEFLDQLNKARKAGNYGQLRDLAAGYIQREVLPINNVYMAKV
LDYSMDACIQLQKFEEAFQHGVLALNVYRAYLNDIHPLTGLQLMKLGKILLWNMKNEEAI
QMLLEALKVLQITHSHKGEVMHELRTLIEQCQVEIRHKSKRKS
>Harore.CG.MTP2014.S36.g08103.01.t
ATGACATATAGATTGAGTGCATTGCGATCTAACTTAGGCAGTTGGTGGTGCTTCAGCCCT
AAGCAAAGCCTAAGTTTCGAAATGCTGGAAGTGTTCTATACGCAAGAACGAGGAAGGGGC
CTGAAATCCAATGCTGCTATAAGAAGGGGCACTGTTTTAATGACCTCAGAGCCTTTCATT
TATCTGCTTACAACCTCACAGAAAGGAATAAGATGTGATCACTGTTTTCAGAAGCAGGAA
ACTTTGCTGCGATGTTCTGGATGTAAATTCATGAGATACTGCGATAAAAATTGCCAGAGA
GGAGCATGGTCACAGCACAAACAAGAGTGTGCTGCATTAAAAAGGGTCTCGCCAAAAATT
CCACCGGATTTTGTCATTTTACTATCGCGAGTTTTGTGGAAGCTGGAGAATTCTATGGAG
GATAATAAAACAGAAGATCTGGTATCAATTATGGATCTAGAATCAAACTACGACAGACTG
ACCGAAGGACAAAAGGAAAGCTTAGGACAGTTTGTTATCATATTACATTCCTTCTGGGGG
CTTGGAAAATTACCTCTGCAAGTTCCTGATATCAAGGCAGTGTTGGAATTGTGTGCAAAG
TTAAAAAACAATTGCTTTGCAATATGTGATGAGGAGCTTCAATCAGACATCGGAACAGGG
GTGTATTTAAGTTGCAGTCTGCTTAATCACAGTTGTGTTCCAAACTGCATTGCAGTATTT
GACCAGTTGCAACTAAATGTAAGAGCCATCCGAGATATAAATGAGGATGAAGAACTATTT
ATCTCCTATGTGGACCAGTTAGCACCCAGCGACGAGAGACAAGAGGAAATCGAAAATATA
TATAGGTTCAAGTGCGAGTGTCCTTCTTGCAAAGATAAAATAAATGATAGCAAAATGTTA
TGCGATTTTAACAACAAAACACTTTGCTACAATTCGTCGAAAATTACATCGGTGAAAGAA
TTTTTAGATCAACTGAACAAAGCAAGAAAAGCGGGAAACTACGGACAATTGAGAGATTTA
GCAGCGGGTTATATTCAAAGAGAAGTCCTGCCTATAAATAATGTGTACATGGCAAAGGTA
CTCGATTACTCAATGGATGCGTGTATACAACTTCAAAAATTTGAGGAGGCATTCCAGCAC
GGTGTGTTAGCTCTAAACGTGTACAGAGCTTATCTCAATGATATCCATCCACTAACTGGA
CTCCAGTTGATGAAGCTAGGAAAAATACTACTCTGGAATATGAAAAATGAGGAAGCCATA
CAAATGCTTTTAGAGGCACTCAAAGTCCTTCAGATCACGCATAGTCACAAAGGAGAAGTG
ATGCATGAGCTTCGAACGCTCATTGAACAATGTCAAGTTGAGATCAGACACAAAAGTAAA
CGGAAAAGTTAA
SMART |
SET_dom (IPR001214) - T[27-270] 1.3E-5 |
ProSiteProfiles |
SET_dom (IPR001214) - T[27-264] 14.234 |
Pfam |
SET_dom (IPR001214) - T[38-263] 1.6E-11 |
ProSiteProfiles |
Znf_MYND (IPR002893) - T[72-110] 11.871 |
ProSitePatterns |
Znf_MYND (IPR002893) - T[72-110] . |
Pfam |
Znf_MYND (IPR002893) - T[72-110] 9.9E-10 |
Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[384-463] 4.3E-18 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
SMYD3_HUMAN | 37.123 % | 276 | 2.3E-88 |
SMYD1_HUMAN | 28.381 % | 200 | 7.96E-59 |
SMYD2_HUMAN | 27.483 % | 191 | 5.04E-56 |