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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R145...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Haaura.CG.MTP2014.S2...'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S374.g12881.01.t

Possible name(s)

LRRC74A; LRRC74B; NLRC3

Location

S374 [6,717 / 9,297]

Sequences

Amino acid sequence

Length: 288

>Harore.CG.MTP2014.S374.g12881.01.p
ILFIKDIDEYLPFFLIKKNTILKMSDSNENPKDNSEWDTDLELDVKLYTILYEVYLKVNT
SIIELNLEDNWITAEGSRDIAEMLLENCYIANLVRQIDIQITLALDLSHNLFSELGGEWL
GQGIAANESIETLNLSWNHLRLKGAIAISAGMKVNITIRNLDLSWNGFSDEGAAAMAEVI
KANNTMTNLDISHNRISSEGVTLLTKGLLVNDTIRVLKIGGNPIGSNGSLELIRAISHNS
KTAVEILDIADIPVNKEFKEISLVLAVRGNFRYSVERNGKLKLEENDE

Nucleotide sequence

Length: 978

>Harore.CG.MTP2014.S374.g12881.01.t
ATTTTGTTCATTAAGGATATAGATGAATATTTACCATTTTTTCTAATTAAAAAAAATACG
ATATTGAAAATGAGCGATAGTAATGAAAATCCAAAAGACAATTCGGAATGGGACACGGAC
CTCGAATTAGATGTTAAGCTCTATACAATTCTATATGAAGTATATTTGAAGGTGAATACC
TCCATTATTGAACTGAATCTTGAAGACAATTGGATCACGGCAGAAGGATCTCGGGATATT
GCAGAAATGTTACTGGAAAACTGCTACATTGCAAATCTTGTGAGACAAATAGATATACAA
ATAACGTTAGCATTGGATTTGAGTCACAATCTGTTTTCAGAGCTAGGAGGCGAATGGTTG
GGTCAAGGAATCGCTGCAAATGAATCGATAGAAACACTGAATCTTTCTTGGAATCATCTT
CGATTGAAAGGTGCCATTGCTATATCTGCTGGAATGAAAGTAAACATCACGATTAGAAAT
TTAGACCTTTCGTGGAACGGATTTTCAGACGAGGGAGCAGCTGCCATGGCAGAAGTGATA
AAGGCAAACAACACAATGACAAATCTCGATATAAGTCATAACAGGATCTCATCCGAAGGG
GTGACTTTACTAACGAAAGGATTGCTTGTGAACGATACAATTCGAGTTTTAAAAATCGGA
GGAAATCCTATTGGGAGTAATGGATCTCTCGAACTCATACGGGCAATATCACATAACTCG
AAAACAGCGGTGGAAATTCTGGATATCGCGGACATTCCAGTAAACAAAGAATTCAAAGAA
ATTTCACTCGTGCTGGCAGTCAGAGGGAATTTTCGTTACAGCGTTGAAAGAAACGGAAAA
CTCAAACTTGAAGAAAATGACGAGTGAATAAATCTTCAATTGATTTCTCAATTCTCCCCC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTAAATCAATAATAAATTTATACCACAGC
TGTTGTGAACAATCACGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[50-102] 7.9E-6 - T[103-264] 1.3E-33
Pfam
Leu-rich_rpt (IPR001611) - T[59-76] 0.32 - T[127-149] 0.0018 - T[155-177] 4.3E-5 - T[183-204] 2.9E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LR74A_HUMAN 36.641 % 146 2.03E-40
LR74B_HUMAN 36.923 % 158 9.23E-46
NLRC3_HUMAN 30.811 % 92.4 7.03E-21