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  1. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S37.g01355.01.t

Possible name(s)

CKAP5; CLASP1; CLASP2

Location

S37 [57,625 / 60,817]

Sequences

Amino acid sequence

Length: 1,063

>Harore.CG.MTP2014.S37.g01355.01.p
MKEWLENTNLSIWFEDEIVSGALAVPKHIFLRVELLNWLAEQLLAVPKLSSAAKDGLEAC
VKHLYSCCEDRSSEVRTKAHAALPGFIYHLGIDKMIRSTGKLSPSSVNTITGLLEKAKEL
VPARKAPASKKLKQVPVKIDVVLEDGPKEEPTESKSAKQSKKAEQEKPENNARPASRGGK
RPATSKKGQEEESGPVLVAVPNGKEQRMKEEQKLKTIKWIFDTPREELVTQLKSQLSLCA
GPGLMKELYHADFQHHLKALAQLSQAMEHQWDETIGTLDLVLRWITLRFYDKNPTVHMRC
LEYLKALFAKMDGANCRMTDYEAMSFIPHLITKIGETKENIRKDVHVIIQQTTKLYPAGK
IFNHLMQGLLTKNSRQKTECLDELGILINTYGIVVCQPTPPKALKEIATHIGDRDNGVRS
AALNVLVGAYNTCGDLIYKYVGKLNDKDMSMLEERIKRSGKFTNEPLAAPVAVNKPEPKT
QQHPDTSKAATSKINVNTSDLHSSGNLPKKYDIPELHQEDDFTFEMPQLKDTSCDELLNN
DISLSPGISGRLAKWKQQRAMQNINSTLNVVISGLASADLDTCLRSVHQLDEVLKHEEKR
VLLKPRIDQILTTSCIQIRMAPNRFLVKVTADNADSVGTGDAGGWMSKEVSLYKSLVSIN
VYLFQIPELALCASTDSLEDFIHAVVIFILDEKLNNIPQGPAIIKVLNILILKVFQTANS
TNMFCALFRLLLRSMEDTEDIRDLIIKCLWRITRKIPTFLKPGEGRPPLQLSPVLTELNK
CFLAFQSKQHVLEKIGNDMPHRTINTFLHHLCQEVGLSIFDDIQKVENIEKSELVKCVKL
NLTSYSTSEIEAAASKSLSLSTSSERKENVASAINGNLSPDTKLSLIFKKVGSREQTKQG
LQELYDFKLQYPDYDIEPEFANTTPLFRNYINRALWSIEQERKKGGIKPSGLPTSKEKNR
TAQDYFERMKILRVRCGLSIDNIPPLRNNNKTESSDASANNQIQENRKEDKEQAPSKNTN
LTDSSSSIQPPASSAPRRLPSATNVEDLKRRLEKIKNESRKRN

Nucleotide sequence

Length: 3,192

>Harore.CG.MTP2014.S37.g01355.01.t
ATGAAAGAATGGCTGGAAAACACTAATTTATCTATATGGTTCGAGGATGAGATCGTGTCC
GGCGCTCTTGCTGTACCAAAGCACATTTTTTTACGCGTAGAGTTGCTGAATTGGCTTGCC
GAACAACTTCTAGCCGTGCCCAAGCTAAGCTCGGCTGCGAAAGATGGTCTTGAGGCATGT
GTGAAGCATTTATATTCTTGCTGTGAAGACCGCAGTAGTGAAGTTCGTACTAAAGCTCAT
GCAGCTCTGCCTGGTTTCATTTACCACTTGGGTATTGATAAAATGATAAGATCAACAGGA
AAACTTAGTCCTTCTTCAGTGAACACTATTACAGGACTACTGGAAAAGGCAAAGGAATTA
GTTCCAGCCCGTAAAGCACCCGCCTCAAAGAAGCTAAAACAAGTCCCTGTGAAAATAGAC
GTCGTCTTGGAGGATGGGCCCAAGGAAGAGCCAACTGAGTCCAAGTCAGCCAAACAATCT
AAAAAAGCAGAGCAGGAAAAGCCCGAGAACAATGCCCGTCCGGCATCGCGAGGTGGCAAA
CGTCCTGCCACGTCTAAAAAAGGACAGGAAGAAGAAAGTGGACCAGTACTTGTAGCTGTG
CCTAATGGTAAAGAACAACGTATGAAAGAAGAACAGAAACTAAAAACAATAAAGTGGATT
TTCGACACCCCTCGTGAGGAACTGGTTACTCAACTGAAGTCCCAGCTGAGCCTTTGTGCT
GGACCTGGACTTATGAAGGAACTTTATCATGCTGATTTCCAACACCATCTCAAGGCACTG
GCCCAGCTTTCTCAAGCAATGGAACATCAATGGGATGAAACCATCGGTACCCTTGACCTA
GTGTTACGCTGGATAACATTGAGATTTTATGACAAAAATCCTACTGTCCACATGAGGTGC
TTGGAATACCTGAAAGCACTGTTTGCAAAGATGGACGGCGCCAACTGCCGCATGACCGAC
TATGAGGCTATGAGTTTCATTCCACATCTCATCACAAAAATAGGAGAAACGAAAGAAAAC
ATCAGAAAAGACGTCCACGTTATCATACAGCAGACAACAAAACTTTATCCTGCCGGCAAA
ATATTCAACCACTTGATGCAAGGACTACTAACGAAGAATTCCCGACAGAAGACCGAATGC
TTAGACGAACTTGGTATCCTAATCAACACTTACGGTATTGTTGTGTGTCAACCAACCCCA
CCCAAAGCACTGAAGGAGATTGCTACTCATATTGGAGATAGAGACAACGGCGTTAGATCT
GCAGCACTGAACGTACTTGTGGGAGCTTATAACACCTGTGGCGATTTGATATACAAATAT
GTCGGAAAATTGAACGACAAAGACATGAGCATGTTAGAAGAGAGAATCAAGCGCTCCGGC
AAGTTTACAAACGAACCTCTGGCCGCACCGGTAGCGGTGAACAAGCCGGAACCAAAGACA
CAGCAGCATCCTGATACCAGCAAGGCAGCGACATCAAAAATCAACGTTAACACTAGTGAT
CTTCATTCTTCAGGAAACTTGCCAAAAAAGTATGACATTCCAGAGCTCCATCAGGAGGAC
GATTTTACCTTTGAAATGCCACAGCTGAAAGATACATCCTGCGATGAACTTCTCAACAAT
GACATTTCATTGTCACCGGGTATCTCGGGTCGCCTCGCTAAGTGGAAGCAACAGAGAGCG
ATGCAAAACATTAATTCTACTTTGAATGTAGTCATATCCGGACTAGCTAGTGCTGATCTC
GACACCTGCCTACGTTCTGTTCATCAGCTTGATGAAGTTCTCAAACACGAAGAGAAGCGC
GTGTTGCTGAAGCCGCGAATTGATCAGATTCTGACCACGAGTTGCATACAGATCAGAATG
GCTCCAAACCGATTTCTAGTCAAGGTGACGGCGGATAATGCAGACTCTGTCGGCACTGGT
GACGCAGGAGGCTGGATGTCCAAAGAAGTTTCTTTGTACAAAAGCCTGGTTTCAATAAAC
GTATACCTTTTCCAGATCCCTGAACTTGCTCTTTGCGCATCTACCGACTCGTTGGAAGAT
TTCATACATGCAGTTGTCATCTTTATCCTTGATGAGAAGTTGAACAACATACCGCAAGGC
CCAGCTATTATTAAGGTTTTGAACATCCTGATATTGAAAGTATTCCAAACAGCAAATTCC
ACAAATATGTTCTGTGCGCTTTTTCGTCTTCTGTTGAGATCCATGGAGGATACTGAGGAT
ATTCGCGATCTTATTATAAAATGCTTGTGGAGAATAACAAGAAAGATTCCTACTTTTCTT
AAGCCTGGAGAAGGCAGACCTCCTTTACAACTATCTCCTGTGTTGACCGAGTTGAATAAG
TGCTTTCTTGCTTTCCAAAGCAAGCAACACGTGCTGGAAAAAATAGGTAATGATATGCCT
CATCGCACAATCAACACATTCCTGCATCACCTCTGTCAGGAGGTGGGATTGAGTATTTTT
GATGACATCCAAAAAGTAGAAAACATAGAAAAATCTGAGCTGGTCAAATGTGTCAAACTA
AACCTGACATCCTACAGCACGTCGGAGATAGAAGCTGCCGCTTCCAAATCCCTGAGCCTA
TCAACTTCCTCGGAGAGAAAAGAGAATGTGGCGAGTGCCATAAACGGTAACTTGAGTCCA
GACACGAAGTTGTCTTTAATATTCAAAAAAGTGGGGAGCCGGGAACAAACTAAGCAGGGA
CTCCAAGAGCTGTATGATTTCAAACTTCAATACCCAGATTATGACATAGAGCCTGAATTT
GCCAACACTACGCCCTTGTTCAGGAACTACATCAACAGAGCACTTTGGAGCATCGAACAA
GAACGGAAAAAAGGTGGAATCAAACCGTCGGGTTTGCCGACGTCGAAAGAGAAAAATCGT
ACGGCACAGGACTATTTCGAACGGATGAAAATACTTCGAGTGAGGTGCGGACTGTCAATA
GACAACATACCTCCTTTGCGAAACAATAACAAGACAGAATCTTCTGACGCTTCTGCCAAC
AATCAGATCCAAGAGAATCGAAAAGAAGATAAAGAGCAAGCACCGTCGAAGAACACCAAC
TTGACTGATTCTTCGTCCAGCATACAACCGCCCGCATCGAGTGCCCCAAGAAGACTGCCG
AGCGCCACCAACGTGGAAGATTTGAAGCGAAGGCTAGAAAAAATTAAGAATGAATCTCGA
AAAAGAAACTAG

InterProScan

Gene3D
ARM-like (IPR011989) - T[1-122] 2.1E-24 - T[195-461] 6.0E-82
SUPERFAMILY
ARM-type_fold (IPR016024) - T[31-105] 8.42E-30 - T[225-457] 8.42E-30 - T[736-781] 8.42E-30
SMART
TOG (IPR034085) - T[226-468] 1.7E-46

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CKAP5_HUMAN 36.964 % 641 0





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