- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S37.g01355.02.t
Possible name(s)
CKAP5; CLASP1; CLASP2
Gene model
Location
S37 [57,625 / 63,598]
Amino acid sequence
Length: 1,990
>Harore.CG.MTP2014.S37.g01355.02.p
MTDEDEWKKLTTEAKVQHKLWKARSEGYKECIKNFPLWDEGSSEYSKYLGLVKKFVTDTN
ELVRIQGLEAVLIFVTNATVAKKTCGEVIAGIVAKCFNTKPRLKEVAMEVCLMYIEIDKN
EQTQEELVKGFASKQPKVAAACLETVVKALSLFGSKVISVKPLLKEILKLLDHRDKVVRE
GAKALSVEIYRWIGPAVKVPFQNVNPVVLKELEDAWEKSSGGKPEQTRFMRSQQDLKDKM
ETKKAAQSAEGRSQPEEVEEEEQIDPYDLLVPVEILSKLPKNFYEQIEAKKWQERKEMLD
QCQKLCENARIEPADFGDLVRALKKVVSKDTNVMLVTVAAKCIAGLAKGIRKKFQPYASV
CIDAILEKFKEKKPAVVAALQDAIDAVYLSTSIPAISETCVEFLENKNPSIKEQCGLFMA
RALKNTKASQINKAIVKMLVPPLLKNVDHSTPNVRDAAYQALGTMLRLAEKQMSPFIVDL
DNLKMEKIKEYAGKSEDKQPAPAAKPEEPAKPKARPKTAPTKVAKAGNKKDAAKQKGKAT
AKVNELKEEPLLGDVVVEDQMAAFIEEEVLKQITNANWKERVEGLKAIQQKLRLSDVKSI
PCQAIIKTLGSGKPGWKDNNFNSLKDRFVIVKYLAENGTFSNTSAGLCVPALVDKIGDAK
CGAAAKEALTAIAEATSFSSLADTVLEISMSHKNPKIQSESLSWLSNAIREFGMSGANVK
LFISKIKIGFAATNPVVRTAALSVLGTMTLYIGPKIRMFFESEKPAILQQVETEIEKCKG
ESAPAPTRGTKSSKADQGDSEEEVEEAPVAVEDLVPRVDISGSITDTLLNQLGDKNWKIR
REALEEVAKIINEAKYVEPTMGELPSALKNRLGDSNKLLVTSTLAILQQLSTALGSHCLK
FVKILAPGMINVLADSKPNLRQAALNTMKEWLENTNLSIWFEDEIVSGALAVPKHIFLRV
ELLNWLAEQLLAVPKLSSAAKDGLEACVKHLYSCCEDRSSEVRTKAHAALPGFIYHLGID
KMIRSTGKLSPSSVNTITGLLEKAKELVPARKAPASKKLKQVPVKIDVVLEDGPKEEPTE
SKSAKQSKKAEQEKPENNARPASRGGKRPATSKKGQEEESGPVLVAVPNGKEQRMKEEQK
LKTIKWIFDTPREELVTQLKSQLSLCAGPGLMKELYHADFQHHLKALAQLSQAMEHQWDE
TIGTLDLVLRWITLRFYDKNPTVHMRCLEYLKALFAKMDGANCRMTDYEAMSFIPHLITK
IGETKENIRKDVHVIIQQTTKLYPAGKIFNHLMQGLLTKNSRQKTECLDELGILINTYGI
VVCQPTPPKALKEIATHIGDRDNGVRSAALNVLVGAYNTCGDLIYKYVGKLNDKDMSMLE
ERIKRSGKFTNEPLAAPVAVNKPEPKTQQHPDTSKAATSKINVNTSDLHSSGNLPKKYDI
PELHQEDDFTFEMPQLKDTSCDELLNNDISLSPGISGRLAKWKQQRAMQNINSTLNVVIS
GLASADLDTCLRSVHQLDEVLKHEEKRVLLKPRIDQILTTSCIQIRMAPNRFLVKVTADN
ADSVGTGDAGGWMSKEVSLYKSLVSINVYLFQIPELALCASTDSLEDFIHAVVIFILDEK
LNNIPQGPAIIKVLNILILKVFQTANSTNMFCALFRLLLRSMEDTEDIRDLIIKCLWRIT
RKIPTFLKPGEGRPPLQLSPVLTELNKCFLAFQSKQHVLEKIGNDMPHRTINTFLHHLCQ
EVGLSIFDDIQKVENIEKSELVKCVKLNLTSYSTSEIEAAASKSLSLSTSSERKENVASA
INGNLSPDTKLSLIFKKVGSREQTKQGLQELYDFKLQYPDYDIEPEFANTTPLFRNYINR
ALWSIEQERKKGGIKPSGLPTSKEKNRTAQDYFERMKILRVRCGLSIDNIPPLRNNNKTE
SSDASANNQIQENRKEDKEQAPSKNTNLTDSSSSIQPPASSAPRRLPSATNVEDLKRRLE
KIKNESRKRN
Nucleotide sequence
Length: 5,973
>Harore.CG.MTP2014.S37.g01355.02.t
ATGACCGATGAAGACGAATGGAAGAAACTTACAACGGAGGCCAAGGTTCAGCACAAGTTG
TGGAAAGCGAGATCGGAAGGATACAAGGAATGCATTAAGAATTTCCCGCTCTGGGACGAA
GGCAGCTCGGAGTACTCAAAGTACTTGGGACTGGTTAAGAAATTCGTAACGGATACCAAT
GAGCTGGTTCGAATTCAAGGACTCGAAGCCGTTCTTATATTCGTTACAAACGCCACTGTC
GCTAAAAAAACCTGTGGCGAGGTAATTGCTGGAATCGTGGCCAAATGCTTCAATACCAAA
CCGCGTCTCAAAGAAGTGGCAATGGAAGTTTGTCTCATGTATATAGAAATTGACAAAAAT
GAACAGACGCAAGAAGAATTGGTTAAGGGATTCGCCAGCAAACAACCCAAGGTCGCAGCA
GCCTGTCTTGAGACAGTGGTGAAAGCATTGAGTCTGTTTGGGTCAAAAGTGATTAGTGTC
AAACCTTTGCTCAAAGAGATTCTCAAGTTACTTGATCACAGAGACAAGGTTGTTCGTGAG
GGTGCGAAGGCTTTGTCAGTGGAGATTTACAGATGGATAGGTCCTGCGGTAAAAGTTCCT
TTTCAAAATGTCAACCCAGTAGTGCTAAAAGAACTGGAAGATGCTTGGGAGAAATCTTCA
GGTGGCAAGCCCGAGCAGACACGTTTCATGAGATCTCAGCAGGATTTGAAGGATAAAATG
GAGACGAAAAAAGCGGCTCAATCTGCTGAAGGCAGATCTCAACCGGAGGAAGTTGAAGAA
GAGGAACAAATAGATCCTTATGACCTCCTGGTTCCAGTTGAAATTTTAAGCAAACTGCCG
AAGAACTTCTATGAACAAATCGAAGCGAAGAAGTGGCAAGAAAGAAAGGAGATGCTGGAC
CAGTGTCAGAAACTTTGCGAAAATGCGAGAATAGAGCCTGCTGATTTTGGCGACTTAGTA
AGGGCTTTGAAAAAAGTTGTTTCGAAGGATACAAACGTGATGCTGGTTACGGTAGCCGCA
AAGTGTATCGCTGGCCTAGCTAAAGGTATACGAAAGAAGTTTCAACCCTATGCTAGCGTG
TGTATCGATGCTATATTAGAGAAATTCAAAGAGAAAAAACCCGCTGTTGTTGCTGCACTG
CAAGACGCCATAGATGCTGTTTATCTTTCTACAAGTATTCCAGCTATTAGCGAAACATGT
GTTGAATTTTTGGAAAATAAAAATCCGTCTATTAAGGAGCAGTGCGGGTTGTTCATGGCG
AGGGCTTTGAAGAATACTAAGGCGTCACAAATAAACAAAGCCATTGTTAAGATGCTTGTG
CCACCATTGCTGAAAAATGTTGATCACAGCACCCCTAATGTGCGTGATGCAGCTTATCAG
GCCCTCGGTACCATGCTTCGACTCGCAGAAAAACAAATGTCTCCTTTCATTGTGGACCTT
GACAATCTAAAAATGGAAAAGATAAAAGAATACGCTGGTAAATCTGAAGATAAGCAGCCA
GCACCTGCAGCGAAACCCGAAGAGCCAGCTAAGCCAAAAGCCCGTCCAAAGACGGCTCCG
ACGAAAGTTGCTAAAGCCGGAAATAAAAAAGATGCTGCAAAGCAAAAAGGCAAGGCTACG
GCCAAAGTAAACGAACTTAAAGAGGAGCCTCTGTTGGGTGATGTGGTGGTTGAAGATCAA
ATGGCAGCCTTCATTGAAGAGGAGGTTTTAAAACAGATTACCAATGCGAATTGGAAAGAG
AGAGTTGAAGGACTTAAGGCAATTCAACAGAAACTAAGATTGTCTGATGTAAAAAGTATT
CCCTGTCAAGCCATCATAAAAACTTTAGGATCAGGCAAACCTGGTTGGAAGGACAATAAT
TTCAACAGTCTCAAGGATAGGTTTGTCATCGTGAAGTACTTGGCAGAAAATGGGACTTTC
AGCAATACAAGTGCAGGACTTTGCGTCCCGGCCCTCGTGGACAAAATCGGGGATGCCAAA
TGCGGCGCTGCCGCGAAGGAAGCTCTCACTGCGATTGCGGAGGCAACAAGTTTTTCAAGC
TTGGCTGATACAGTTTTGGAAATTTCAATGTCACACAAAAATCCCAAAATTCAAAGTGAA
TCCTTGTCTTGGCTGAGTAATGCCATTCGGGAATTTGGAATGTCGGGTGCTAACGTCAAA
CTCTTCATCAGTAAAATTAAGATCGGTTTTGCCGCCACTAATCCGGTGGTACGTACAGCT
GCGTTGTCTGTGCTGGGTACTATGACACTGTACATCGGCCCCAAAATTCGCATGTTTTTT
GAGAGTGAAAAGCCAGCCATTTTGCAACAGGTAGAAACAGAAATCGAGAAATGTAAGGGG
GAATCCGCACCAGCACCGACTAGAGGAACAAAGTCATCGAAGGCAGACCAGGGTGACAGT
GAGGAAGAAGTCGAAGAAGCTCCTGTCGCTGTTGAAGATCTCGTTCCAAGGGTAGATATA
TCAGGTAGCATAACAGACACACTGCTCAATCAACTTGGGGATAAAAACTGGAAGATCAGG
CGAGAAGCTTTGGAGGAGGTTGCAAAAATAATTAACGAGGCAAAATACGTCGAACCTACA
ATGGGTGAACTTCCAAGCGCACTAAAAAATAGGCTGGGAGATTCCAATAAGTTATTGGTA
ACATCTACCCTTGCTATTCTTCAACAACTTTCTACAGCACTTGGATCACATTGCTTGAAG
TTTGTTAAAATATTAGCTCCAGGGATGATTAACGTACTTGCCGACAGCAAACCTAACTTA
CGACAAGCCGCTTTGAATACAATGAAAGAATGGCTGGAAAACACTAATTTATCTATATGG
TTCGAGGATGAGATCGTGTCCGGCGCTCTTGCTGTACCAAAGCACATTTTTTTACGCGTA
GAGTTGCTGAATTGGCTTGCCGAACAACTTCTAGCCGTGCCCAAGCTAAGCTCGGCTGCG
AAAGATGGTCTTGAGGCATGTGTGAAGCATTTATATTCTTGCTGTGAAGACCGCAGTAGT
GAAGTTCGTACTAAAGCTCATGCAGCTCTGCCTGGTTTCATTTACCACTTGGGTATTGAT
AAAATGATAAGATCAACAGGAAAACTTAGTCCTTCTTCAGTGAACACTATTACAGGACTA
CTGGAAAAGGCAAAGGAATTAGTTCCAGCCCGTAAAGCACCCGCCTCAAAGAAGCTAAAA
CAAGTCCCTGTGAAAATAGACGTCGTCTTGGAGGATGGGCCCAAGGAAGAGCCAACTGAG
TCCAAGTCAGCCAAACAATCTAAAAAAGCAGAGCAGGAAAAGCCCGAGAACAATGCCCGT
CCGGCATCGCGAGGTGGCAAACGTCCTGCCACGTCTAAAAAAGGACAGGAAGAAGAAAGT
GGACCAGTACTTGTAGCTGTGCCTAATGGTAAAGAACAACGTATGAAAGAAGAACAGAAA
CTAAAAACAATAAAGTGGATTTTCGACACCCCTCGTGAGGAACTGGTTACTCAACTGAAG
TCCCAGCTGAGCCTTTGTGCTGGACCTGGACTTATGAAGGAACTTTATCATGCTGATTTC
CAACACCATCTCAAGGCACTGGCCCAGCTTTCTCAAGCAATGGAACATCAATGGGATGAA
ACCATCGGTACCCTTGACCTAGTGTTACGCTGGATAACATTGAGATTTTATGACAAAAAT
CCTACTGTCCACATGAGGTGCTTGGAATACCTGAAAGCACTGTTTGCAAAGATGGACGGC
GCCAACTGCCGCATGACCGACTATGAGGCTATGAGTTTCATTCCACATCTCATCACAAAA
ATAGGAGAAACGAAAGAAAACATCAGAAAAGACGTCCACGTTATCATACAGCAGACAACA
AAACTTTATCCTGCCGGCAAAATATTCAACCACTTGATGCAAGGACTACTAACGAAGAAT
TCCCGACAGAAGACCGAATGCTTAGACGAACTTGGTATCCTAATCAACACTTACGGTATT
GTTGTGTGTCAACCAACCCCACCCAAAGCACTGAAGGAGATTGCTACTCATATTGGAGAT
AGAGACAACGGCGTTAGATCTGCAGCACTGAACGTACTTGTGGGAGCTTATAACACCTGT
GGCGATTTGATATACAAATATGTCGGAAAATTGAACGACAAAGACATGAGCATGTTAGAA
GAGAGAATCAAGCGCTCCGGCAAGTTTACAAACGAACCTCTGGCCGCACCGGTAGCGGTG
AACAAGCCGGAACCAAAGACACAGCAGCATCCTGATACCAGCAAGGCAGCGACATCAAAA
ATCAACGTTAACACTAGTGATCTTCATTCTTCAGGAAACTTGCCAAAAAAGTATGACATT
CCAGAGCTCCATCAGGAGGACGATTTTACCTTTGAAATGCCACAGCTGAAAGATACATCC
TGCGATGAACTTCTCAACAATGACATTTCATTGTCACCGGGTATCTCGGGTCGCCTCGCT
AAGTGGAAGCAACAGAGAGCGATGCAAAACATTAATTCTACTTTGAATGTAGTCATATCC
GGACTAGCTAGTGCTGATCTCGACACCTGCCTACGTTCTGTTCATCAGCTTGATGAAGTT
CTCAAACACGAAGAGAAGCGCGTGTTGCTGAAGCCGCGAATTGATCAGATTCTGACCACG
AGTTGCATACAGATCAGAATGGCTCCAAACCGATTTCTAGTCAAGGTGACGGCGGATAAT
GCAGACTCTGTCGGCACTGGTGACGCAGGAGGCTGGATGTCCAAAGAAGTTTCTTTGTAC
AAAAGCCTGGTTTCAATAAACGTATACCTTTTCCAGATCCCTGAACTTGCTCTTTGCGCA
TCTACCGACTCGTTGGAAGATTTCATACATGCAGTTGTCATCTTTATCCTTGATGAGAAG
TTGAACAACATACCGCAAGGCCCAGCTATTATTAAGGTTTTGAACATCCTGATATTGAAA
GTATTCCAAACAGCAAATTCCACAAATATGTTCTGTGCGCTTTTTCGTCTTCTGTTGAGA
TCCATGGAGGATACTGAGGATATTCGCGATCTTATTATAAAATGCTTGTGGAGAATAACA
AGAAAGATTCCTACTTTTCTTAAGCCTGGAGAAGGCAGACCTCCTTTACAACTATCTCCT
GTGTTGACCGAGTTGAATAAGTGCTTTCTTGCTTTCCAAAGCAAGCAACACGTGCTGGAA
AAAATAGGTAATGATATGCCTCATCGCACAATCAACACATTCCTGCATCACCTCTGTCAG
GAGGTGGGATTGAGTATTTTTGATGACATCCAAAAAGTAGAAAACATAGAAAAATCTGAG
CTGGTCAAATGTGTCAAACTAAACCTGACATCCTACAGCACGTCGGAGATAGAAGCTGCC
GCTTCCAAATCCCTGAGCCTATCAACTTCCTCGGAGAGAAAAGAGAATGTGGCGAGTGCC
ATAAACGGTAACTTGAGTCCAGACACGAAGTTGTCTTTAATATTCAAAAAAGTGGGGAGC
CGGGAACAAACTAAGCAGGGACTCCAAGAGCTGTATGATTTCAAACTTCAATACCCAGAT
TATGACATAGAGCCTGAATTTGCCAACACTACGCCCTTGTTCAGGAACTACATCAACAGA
GCACTTTGGAGCATCGAACAAGAACGGAAAAAAGGTGGAATCAAACCGTCGGGTTTGCCG
ACGTCGAAAGAGAAAAATCGTACGGCACAGGACTATTTCGAACGGATGAAAATACTTCGA
GTGAGGTGCGGACTGTCAATAGACAACATACCTCCTTTGCGAAACAATAACAAGACAGAA
TCTTCTGACGCTTCTGCCAACAATCAGATCCAAGAGAATCGAAAAGAAGATAAAGAGCAA
GCACCGTCGAAGAACACCAACTTGACTGATTCTTCGTCCAGCATACAACCGCCCGCATCG
AGTGCCCCAAGAAGACTGCCGAGCGCCACCAACGTGGAAGATTTGAAGCGAAGGCTAGAA
AAAATTAAGAATGAATCTCGAAAAAGAAACTAG
| SMART |
TOG (IPR034085) - T[1-225] 5.4E-49 - T[268-501] 1.8E-74 - T[554-784] 7.7E-59 - T[813-1050] 1.3E-56 - T[1153-1395] 1.7E-46 |
| Gene3D |
ARM-like (IPR011989) - T[2-252] 9.0E-61 - T[265-495] 1.9E-81 - T[555-797] 1.3E-54 - T[808-1049] 6.3E-76 - T[1122-1388] 1.6E-81 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[16-195] 1.78E-34 - T[273-472] 1.78E-34 - T[568-613] 2.3E-57 - T[659-754] 2.3E-57 - T[819-1032] 2.3E-57 - T[1152-1384] 2.3E-57 - T[1663-1707] 2.3E-57 |
| Pfam |
HEAT (IPR000357) - T[439-466] 0.0025 |
| Pfam |
CLASP_N_dom (IPR024395) - T[834-1010] 9.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CKAP5_HUMAN | 42.919 % | 1541 | 0 |