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  1. Transcript 'KH2012:KH.C9.701.v1....'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'
  3. Transcript 'KH2012:KH.L23.1.v2.A...'
  4. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S385.g15312.01.t

Possible name(s)

CDT1

Location

S385 [2,309 / 8,058]

Sequences

Amino acid sequence

Length: 758

>Harore.CG.MTP2014.S385.g15312.01.p
RMSQSVVTNYFVKKRRGGYVQPSKRLKLSQDSSIEAVDKSLSKNELIIQPDKIVEQIRKA
KTRSSCRKKTGTQEPAITRKSGRTLRKPEIQEKRSSLDEYFCQNLPPVTESLDEITLHLS
PSSKTSSLCGSERDLNEVVTAAEDDHDSPSSPSKRQKVMEKREMMARQKRGRVTPKKKLA
YEFKVAEKSVEETLTPIIDFTTRRRAKKQLVMAQETDDKAKNIAASSDIIEKKVINTVKA
PEKPKDSVVEKEKQKTSARNNKSKEIGQNEVQKRTRRNKGTTEEAGTSDTMKKSEILAKK
LLAKKMESPDTVKEALKSSNKLKDLQDTLMKMRDQKKKSQEREKMKKAKEGKQKKKDETK
SEKKSVSKREFAYETLHNLAQEVPKGLPLPFKYKILEEMFRGTDTVVSMMFNRQQNTTWS
TLQKSVKEMIRKNFELSNLEQIKFLFPAAYLYRQEKGILSYNSGNIRPSDYQLTLEPILD
ERECEQFGNEPRKLTSSMLVKRRHHFLVQLISVVKQHHKKFLSSLEPPIEVPDDKILRWH
PQFPLDKIPDIETSELPKPPNHDKDKCSSAKDVLDKARAKFTKKAVDALKKVAERASMTP
EKKRTIDEENNNLTPKKSPEIKPAPSLKGIPKSLLTKIRAKEAEKKLKTMIRTNEEETKL
AKLMKSSDIARALRMLFVTEKKAALPLEYINERLVKCTAGIQVQHVVEEHVLLLVELIPT
WLSVAKVRGKSYIKMNKSKEIANVVQDIQEKIKEIENA

Nucleotide sequence

Length: 3,153

>Harore.CG.MTP2014.S385.g15312.01.t
AGAATGTCTCAGTCTGTAGTTACAAATTATTTTGTTAAAAAGCGCCGTGGTGGATACGTC
CAACCTTCGAAACGACTGAAATTATCACAAGATTCATCGATAGAAGCTGTTGATAAATCG
TTGTCAAAAAATGAACTGATAATCCAGCCTGATAAGATCGTCGAACAAATACGAAAAGCA
AAAACAAGAAGCAGTTGTAGGAAAAAAACAGGAACGCAGGAACCTGCGATAACAAGAAAA
TCTGGAAGGACACTACGGAAACCTGAAATTCAAGAAAAAAGATCTTCGTTGGATGAATAT
TTTTGTCAAAATCTTCCTCCGGTCACAGAATCTCTTGATGAAATTACACTTCATCTTTCT
CCTTCCTCCAAAACATCCTCTCTTTGCGGTTCTGAAAGGGATTTGAATGAGGTCGTTACA
GCCGCAGAAGACGATCATGATTCACCATCATCCCCTTCAAAACGACAAAAAGTTATGGAA
AAAAGAGAAATGATGGCAAGACAGAAGAGAGGACGAGTTACACCAAAGAAGAAGTTAGCT
TATGAATTCAAAGTTGCAGAGAAATCTGTCGAAGAAACGTTGACTCCAATAATAGATTTC
ACGACGAGAAGAAGAGCAAAAAAACAACTTGTAATGGCGCAAGAAACAGATGACAAAGCA
AAAAATATTGCTGCGTCAAGTGACATCATTGAAAAGAAAGTTATTAACACTGTGAAAGCT
CCAGAGAAGCCAAAAGACAGTGTTGTAGAGAAAGAGAAGCAGAAAACTTCAGCAAGAAAT
AATAAATCAAAAGAAATCGGACAGAATGAAGTTCAGAAACGAACCAGGAGAAATAAAGGG
ACTACAGAAGAAGCTGGAACTTCTGACACAATGAAGAAAAGTGAAATTCTGGCAAAGAAG
TTATTAGCAAAGAAAATGGAATCTCCTGACACTGTGAAAGAAGCCCTCAAAAGTTCAAAC
AAATTAAAAGACTTGCAGGACACTCTGATGAAGATGCGGGATCAAAAAAAGAAGTCGCAG
GAGAGAGAAAAGATGAAGAAAGCGAAAGAAGGAAAACAGAAAAAAAAAGACGAGACGAAA
TCAGAGAAAAAATCCGTAAGCAAGCGAGAATTTGCTTACGAAACTTTACACAACCTTGCA
CAGGAAGTGCCTAAGGGACTTCCATTGCCATTCAAATATAAGATCTTGGAGGAAATGTTT
CGTGGCACCGACACAGTTGTCAGCATGATGTTTAACAGACAACAGAATACAACATGGTCA
ACATTGCAAAAATCTGTTAAAGAAATGATAAGAAAAAACTTCGAACTGAGCAATTTGGAA
CAAATTAAATTCCTCTTTCCTGCAGCTTATCTCTACAGACAAGAGAAGGGAATTCTTAGT
TATAACAGTGGTAATATAAGACCATCTGATTATCAGTTGACATTGGAACCAATACTGGAT
GAAAGAGAATGTGAACAGTTTGGGAATGAACCTCGCAAACTAACAAGCAGTATGTTGGTG
AAACGAAGACATCATTTCCTTGTTCAACTTATTTCTGTTGTCAAACAACATCATAAGAAA
TTTCTCTCTTCTCTCGAACCCCCGATCGAAGTCCCGGATGACAAAATTCTCCGTTGGCAT
CCGCAGTTTCCCCTCGACAAAATACCGGACATAGAAACATCAGAGCTGCCGAAACCACCG
AACCATGACAAAGATAAATGTAGTTCCGCGAAAGATGTATTAGATAAAGCAAGAGCGAAA
TTTACAAAGAAGGCAGTCGACGCTCTCAAAAAAGTTGCAGAAAGAGCCTCGATGACGCCG
GAGAAGAAGCGAACAATCGACGAAGAGAACAATAATTTAACTCCGAAAAAATCACCAGAA
ATCAAGCCAGCTCCATCACTTAAAGGAATACCAAAATCCCTGTTGACAAAGATTCGTGCT
AAAGAAGCTGAGAAAAAATTGAAAACGATGATAAGAACAAACGAAGAAGAAACAAAACTT
GCTAAATTGATGAAAAGTTCTGATATTGCAAGAGCATTGAGAATGCTTTTTGTGACTGAA
AAAAAAGCAGCTCTGCCACTAGAATACATCAATGAAAGGCTTGTAAAATGTACTGCAGGA
ATTCAAGTACAACACGTTGTTGAGGAACATGTCTTACTCCTCGTCGAGCTCATTCCCACT
TGGTTGTCTGTTGCAAAAGTGAGAGGAAAGAGTTACATCAAGATGAATAAGAGCAAAGAA
ATTGCGAATGTCGTCCAAGATATTCAGGAAAAAATTAAAGAAATTGAAAATGCGTGACGT
GTACTAACAGTAATACCTCACGTGTAAAGTGTTAAGTGGAAAACCTCTTTACTTACAACT
TATGTCAAATTTAGGACGACCTTTTAAAAAGCCAATGCCAATCATTGTAATTTTTAATAT
TCGTGAATCGATTACTGATAAAAAAAGTAAATAAGAGTTTAGATGTCAGAAATGTAGAAT
GTTGCGGTTCATATTCGAAGTGGTTTTAGCATCGTGTACTTCGTTATCTTGAAATTCATT
TCCTTATTATTAGGTTTTGACAAAATTGAAAAAAAATTACTTTCCTATATCCATTGCCTT
TTTAAAATTGTCTTATTCCATTGCAAAATCAAGTCAGTCATATGTAGAGGTCTAACGCAT
TATTGTTATAGAATAATATCGCAGTACATGGTACGTTTCGGTCGCAGACTGGGTCTTGAA
ACAGTGCGTCCTTCACTTACTAGGTAATCCACAACATGCAGGCTATAGTTTAGCTTCCAC
AACATAATTATAATGAGCGACCCTTGCTATTCGGGGGGCGACCTTATTTTAGCAGGCCAT
TTCCTACCCAGCGGCCCCAGTCCACCCCTAGTGCTGTTGTTTACCTATAAACCTTTTTCA
GTTACTGAATTTCACCAAATATATTTCACTACCCTAGATAATCCGCAACCACTCGATTGA
GTTTCAATACCGAATGAATAGATTTTTTAGGTAAGAATTTCTAGAAAAAAGGCGAACTTT
ACGTGGTGAAATTTAGGTTTTTATGTTTTATGACCAATATCCTATCCTTGTTCTGTGAAT
TTGTGAAATAAAAGTTGTTACTGTGAACCGTTAATTTTACTTACATGACGCAGCCACTGC
GTCATTTCCTGTAGGACTGATGCACTTACCAAG

InterProScan

SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[372-561] 4.35E-44
SMART
CDT1_Gemini-bd-like (IPR014939) - T[389-558] 7.8E-60
Pfam
CDT1_Gemini-bd-like (IPR014939) - T[389-557] 1.9E-51
Pfam
Cdt1_C (IPR032054) - T[631-724] 4.4E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDT1_HUMAN 39.896 % 278 9.14E-85





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