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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C4.356.v2....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C4.356.v1....' > 
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S387.g07369.01.t

Possible name(s)

UBR1; UBR2; UBR3

Gene model

Harore.CG.MTP2014.S387.g07369

Location

S387 [46,713 / 59,473]

Sequences

Amino acid sequence

Length: 1,564

>Harore.CG.MTP2014.S387.g07369.01.p
MCDCGDPEAFSSHFRCDFHNDLLHAPGTEHKMHTSSGGGCCDCGDVEAWHKYPACTLHSE
NQENMESEDAVSRLPQVIRDRAPKFFAEILKYIVDLLTVERVSTNELPESLQPSVVTDNY
VTMLFNDESHTFDYVISMLRRAIECDRNMGADFATIVDREGRSIIAIANKEKCEEVDGIV
RSRQTSHHTPYSSQPLKSLVIHVNVIAHQEMTLLLLTWLSKLVKQSEGLRLIFSDILLKN
YLPYSPAGGSSEQFVSPVEILVRNDAVLWKTARNLYHQVIMNSLLLDSEMKRRFSVLFTK
LYPIIQTGFLKGDHDHSQSIASLSVQIYTVPTITRYLIINEYLLPIILRTAIHSCCRINA
EDLEAVVAQGWCQILPLDAKKMRSSFRRMQYSYHDLKYILTNLPDSWTDELRTKFIEGFE
VLLQFLMAMQGMDSVTRKTGIHVEHEPEWETGVSVMMRFNPILHHALKRIQSDEKLMFMA
LNRCLQSLKYIKDAQPGSMTFGTTMFNNKLYDCIDYDITKNPVSSHFPVVRLTAALLLEI
IRSGKSWIEIQAIVGDDVILPNVVELLECPLRCLAVSSQVSAGMWRRNGLSLANQMCYYK
DFRCREEAFDRDINMLQICVAEMGADHFIACLLHKMNLNPELPEFAEHRTNILADFFGIL
ITICGERFVPGISDVTIKEQIRHHIIHILALESKPHSKISKLLQDSITERSDWEDILHEV
ADFIEATNINGVGRYKLKESCFSEFCPHSFHYTSATQEIKAQNEIAQRKKQAKQSTVFVP
PRLPPFSRFFTNIPQLLCCDNFIHILSEFFEKLVVDESHSITDRVVEKVLYLTSMAIVDA
EQQREMDPNTNFDFIKKSIKGCEKSLLFLLKQLAVTESCMMHRETLRWIVAKIENLSDKK
LGAASSSADQETMSQQNAQDKENDMNRNARKRKAQQMREKLLSQMKMMQQSFLSTLPDIS
SQSSQNVPEVLSQSSEVAMELSQDLTLDGEEESPIATSSLWQQKALDVRENAHTCILCQE
DSSVTDETTMVMSALVQRSTVFSRGPPREPKLHEFPHFTDIRFPVGIHTSTCSHTMHFEC
FKQFKESVHGPEARRRIHHRFFRRNFNIEKNEFLCPLCSRISNTVIPVIPQEIVAKQRGI
ESVATTSTENHPSMKEWLKEIEEILTPSKHQKQEFVMRFHVDVSEMDEEMKNVEENEDDR
RGADKEQDVISPMIVTQENSPHPVDPSVHLPFFHQPPTYTSESVVEDTMNETIKKSTETK
SVSSSELSDELRTALEEFAQRTQAIGSNEDVSEIHQHIALWLSAVTTIISVESVSRLDNS
PILAKGPVRISSALAGIIRSSMTYQALCSQEQLSDIRGHALSLLSSLIGVGEIYGTDALL
NTNIFTTFVQLWFSSSTWRKSKSLQENLIVQSHAEFEHHLLFICTLAQIVQCFVFMNVDD
VMKYGKGGEVERSRSATSEATALYQACNQIRAHAELSPLPREVTKNQIYLFLEDCMKPFI
RCCALFLHHVTGVSVPSALEDSNHTGSLLSYIGLPKSYHEYFDVGGQLSLDPLIQRYFAD
TGLH

Nucleotide sequence

Length: 4,695

>Harore.CG.MTP2014.S387.g07369.01.t
ATGTGTGATTGCGGGGATCCTGAAGCGTTCTCTTCCCATTTCCGTTGCGATTTTCACAAC
GACCTGCTGCATGCTCCCGGGACGGAGCATAAGATGCATACATCAAGTGGAGGTGGCTGT
TGTGACTGCGGGGACGTGGAGGCATGGCATAAATACCCGGCATGTACCTTGCATAGTGAA
AACCAAGAAAATATGGAAAGCGAGGATGCTGTTTCGAGACTTCCTCAAGTGATCAGAGAC
AGAGCTCCGAAGTTTTTTGCGGAGATTCTCAAATATATTGTTGATTTACTGACAGTTGAA
AGGGTGTCGACCAATGAACTACCAGAATCACTTCAGCCAAGTGTCGTTACTGATAATTAC
GTCACAATGTTGTTCAACGATGAGTCGCATACTTTCGATTATGTCATCAGTATGCTTCGG
AGAGCAATCGAGTGTGACAGGAACATGGGGGCTGATTTTGCAACGATTGTAGATCGAGAG
GGTCGCTCAATCATTGCCATTGCCAACAAGGAAAAATGCGAGGAAGTGGACGGAATCGTG
AGATCTCGCCAAACCTCACATCATACACCGTATTCCAGCCAGCCATTGAAATCTCTCGTG
ATTCATGTTAATGTTATCGCTCACCAGGAGATGACGCTATTGTTGCTCACATGGCTGTCA
AAACTTGTCAAGCAGTCTGAAGGCCTGCGTTTGATATTTTCTGATATCTTGTTGAAAAAT
TACCTCCCCTACTCACCGGCAGGTGGCAGTAGCGAACAGTTTGTGAGTCCGGTCGAAATA
CTTGTCCGAAACGACGCTGTTTTATGGAAAACTGCAAGAAATCTTTACCATCAAGTCATA
ATGAACAGTTTGTTGTTGGATTCAGAAATGAAACGACGATTCAGTGTTTTGTTCACGAAA
TTATATCCTATTATTCAGACCGGTTTCTTGAAAGGTGATCATGACCATTCGCAATCGATT
GCTTCTCTCTCCGTTCAGATTTACACTGTGCCGACGATTACTCGATATCTGATCATCAAC
GAGTATCTCCTTCCCATAATTCTCCGCACCGCTATTCATTCCTGTTGCAGAATAAATGCG
GAAGATCTGGAAGCAGTAGTAGCTCAAGGATGGTGTCAAATTCTTCCTCTTGATGCAAAG
AAGATGAGAAGTAGTTTCAGGAGGATGCAGTATTCGTATCATGACTTAAAATATATCCTG
ACAAATTTACCTGATAGTTGGACCGACGAACTAAGAACAAAATTCATTGAAGGATTTGAA
GTCTTACTACAGTTTCTCATGGCAATGCAGGGAATGGATTCTGTGACGAGGAAGACTGGC
ATCCACGTTGAACATGAACCTGAATGGGAGACAGGAGTTAGTGTGATGATGAGGTTTAAT
CCAATATTACATCATGCATTGAAACGAATTCAAAGTGATGAGAAACTCATGTTCATGGCA
TTGAACCGTTGTCTGCAATCGCTCAAGTATATCAAAGACGCGCAACCGGGGTCGATGACC
TTCGGTACAACGATGTTCAACAACAAACTGTACGACTGTATCGATTATGACATCACAAAA
AATCCGGTGTCATCCCACTTTCCGGTCGTTAGACTTACAGCAGCCTTGCTCCTGGAAATT
ATAAGGAGCGGAAAAAGCTGGATCGAGATACAAGCGATCGTTGGTGATGATGTGATCCTT
CCAAATGTTGTTGAACTACTAGAATGTCCGCTACGTTGCTTAGCAGTAAGCTCTCAAGTA
AGCGCAGGGATGTGGCGTCGTAACGGACTATCGCTCGCGAATCAAATGTGTTATTACAAA
GATTTCAGATGTAGAGAGGAAGCTTTTGACAGAGATATTAATATGTTACAGATTTGTGTA
GCAGAAATGGGTGCTGATCACTTCATTGCGTGTCTCCTGCATAAGATGAATCTCAATCCG
GAGTTACCAGAATTTGCTGAGCATCGCACAAACATTCTGGCCGATTTCTTTGGAATTCTC
ATCACGATCTGCGGAGAACGATTTGTTCCCGGTATCAGTGACGTCACAATCAAGGAACAG
ATAAGACATCATATCATTCACATTCTTGCATTGGAATCGAAGCCACATTCAAAGATTTCA
AAACTTCTTCAAGATTCTATTACAGAGAGGTCAGACTGGGAAGACATCCTCCATGAAGTC
GCTGATTTCATCGAAGCAACGAATATAAACGGTGTTGGAAGATACAAATTAAAGGAGTCA
TGCTTCAGTGAATTCTGTCCACATTCATTTCACTACACGTCAGCGACGCAGGAGATCAAA
GCCCAGAATGAGATTGCGCAACGAAAAAAACAGGCGAAACAGTCGACCGTCTTCGTTCCA
CCCCGATTGCCCCCGTTCAGCAGATTTTTCACAAACATTCCGCAACTTCTCTGTTGCGAC
AATTTCATTCACATACTCTCGGAATTCTTTGAAAAACTTGTGGTGGATGAATCTCACTCC
ATCACAGACAGGGTGGTTGAAAAGGTGCTGTATTTGACATCTATGGCGATCGTTGATGCG
GAACAACAAAGAGAAATGGATCCCAACACGAATTTTGATTTCATAAAGAAGTCGATAAAA
GGCTGCGAGAAAAGTCTCCTTTTCCTTTTGAAACAACTCGCTGTTACTGAATCGTGTATG
ATGCATCGAGAAACACTTCGATGGATCGTTGCAAAAATAGAAAATTTATCTGATAAAAAG
CTTGGTGCCGCATCATCGTCCGCCGATCAAGAAACCATGAGTCAGCAGAACGCACAGGAC
AAAGAAAATGACATGAACAGAAACGCTCGCAAACGCAAAGCACAGCAGATGCGTGAGAAA
TTGCTGAGTCAGATGAAGATGATGCAGCAAAGTTTCTTGTCGACTTTGCCGGACATTTCA
TCTCAGAGTTCTCAGAATGTTCCGGAAGTTCTTTCCCAGAGTTCAGAGGTCGCAATGGAG
TTATCGCAAGATCTTACCCTAGATGGCGAGGAGGAGTCACCCATAGCAACCTCATCGCTG
TGGCAACAAAAAGCCTTGGATGTTCGTGAAAACGCACACACTTGTATCCTGTGTCAGGAG
GACTCATCCGTGACTGACGAAACAACCATGGTGATGTCAGCTTTGGTTCAAAGGTCAACT
GTGTTCTCTAGGGGTCCTCCTAGAGAACCCAAGCTTCATGAATTTCCTCACTTCACTGAC
ATTCGTTTCCCCGTTGGGATTCACACGAGTACATGCAGCCATACAATGCATTTTGAATGT
TTCAAGCAGTTCAAAGAATCAGTACATGGACCTGAAGCTCGTCGCAGGATTCATCATCGA
TTCTTTCGAAGAAATTTCAACATTGAGAAAAATGAATTTCTCTGCCCGCTATGCAGTCGT
ATAAGCAACACAGTGATTCCGGTCATCCCTCAAGAAATCGTTGCCAAGCAACGTGGAATC
GAGTCTGTCGCTACGACGAGCACGGAAAATCATCCGAGCATGAAGGAATGGTTGAAAGAG
ATCGAAGAGATTTTAACTCCGAGCAAACATCAGAAACAAGAGTTTGTGATGCGGTTTCAT
GTTGATGTGTCAGAGATGGATGAAGAAATGAAAAATGTTGAGGAAAATGAAGATGATCGG
AGAGGAGCTGATAAAGAACAGGATGTTATATCACCCATGATAGTTACCCAGGAAAACAGC
CCTCACCCTGTGGACCCATCTGTACATCTCCCATTCTTTCATCAACCCCCGACATATACG
AGCGAATCCGTTGTTGAAGATACAATGAACGAAACGATTAAGAAATCGACAGAAACAAAA
TCAGTTTCAAGCAGTGAATTATCTGATGAACTTAGAACAGCATTGGAAGAATTTGCTCAG
AGAACTCAGGCCATTGGATCGAACGAAGATGTTTCTGAAATTCATCAACACATCGCGCTA
TGGCTCTCTGCTGTCACCACTATCATCTCTGTGGAGTCTGTGTCACGCTTGGATAATTCC
CCTATACTCGCGAAAGGTCCGGTTCGAATTTCATCGGCGCTTGCTGGAATTATCAGATCA
TCGATGACATATCAAGCATTATGCTCGCAAGAACAGTTAAGTGATATCCGAGGTCATGCT
CTTAGTCTCCTGTCCAGTCTGATCGGCGTTGGCGAAATATACGGAACTGACGCACTTCTC
AACACAAATATATTCACGACATTCGTTCAGTTGTGGTTCTCTAGCTCCACCTGGAGGAAA
TCAAAATCTCTGCAGGAAAATTTGATAGTTCAGTCGCATGCAGAGTTTGAACATCATTTG
TTATTTATTTGCACTCTGGCCCAGATTGTACAATGCTTCGTTTTCATGAATGTCGATGAT
GTCATGAAATATGGAAAAGGTGGAGAGGTCGAAAGGTCAAGGTCAGCGACGTCCGAAGCA
ACTGCGTTATATCAAGCTTGTAATCAGATTCGAGCTCACGCAGAATTGTCTCCTCTTCCA
CGGGAAGTCACCAAAAATCAAATATATTTATTTCTCGAGGATTGTATGAAACCGTTCATT
CGTTGCTGTGCTCTCTTTCTCCATCATGTGACAGGAGTTTCTGTGCCATCTGCTCTGGAA
GATTCGAATCACACGGGGTCGCTGTTGAGCTATATCGGCTTGCCAAAATCATATCACGAA
TATTTTGATGTTGGCGGGCAGCTGAGTTTGGATCCCCTGATACAAAGGTATTTTGCAGAT
ACTGGTTTGCACTGA

InterProScan

Gene3D
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[94-196] 4.0E-5
Pfam
ClpS_core (IPR003769) - T[118-196] 6.6E-17
SUPERFAMILY
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[118-190] 6.28E-12
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[678-758] 8.16E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBR1_HUMAN 31.047 % 523 8.4E-158
UBR2_HUMAN 32.154 % 562 1.13E-171