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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S24....' > 
  2. Transcript 'KH2012:KH.C9.82.v1.A...' > 
  3. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S38.g05404.01.t

Possible name(s)

GPM6A; GPM6B

Gene model

Harore.CG.MTP2014.S38.g05404

Location

S38 [284,516 / 286,075]

Sequences

Amino acid sequence

Length: 461

>Harore.CG.MTP2014.S38.g05404.01.p
MSMYSIDHASGYNDDAYKGYNIGSDGQVVEFYDHTNEPSIHGGNSGVSSSRHLLNSNPGG
HSTPPARRRKRGRHNAGCCDGCVGCLITIGKLPLASAICMLLIWIGTGMFIGAGWAVLDE
TQDLFNKYGPKEGNPAIDAPPEYFLVSGGGFAQNYELRNPEDLGNRVPEVFLGLQRSFIG
IIPFMFIFSIAVVVDGANSTKEIHTKGKGCKSSSAGICCGLVILAGSYLLLLFWVFFLCF
VTLGVYYYRIVMLRCDDLNNRGFNEAVQKDICIDLVQSGFIMFRNTNDQYFGKICGPGDS
SRNTVGDLSGYCDASEHAWQLMLVCFAGCLLNVIAMMHSLMITTANYNKLQRKYSRQQRH
ETTARTVSPATTRRSAPSTIAPPAYVVGTKNGVNDQRRRSRDIELDYMGDDHELASSGRP
PRRFENDDSHVGLLKSNQLSSSVTWVYLRPTTLFFIVSAPF

Nucleotide sequence

Length: 1,386

>Harore.CG.MTP2014.S38.g05404.01.t
ATGTCCATGTACAGTATTGATCATGCATCTGGATATAACGACGATGCCTATAAAGGTTAC
AACATCGGCTCTGATGGTCAAGTAGTCGAGTTCTACGACCATACGAATGAGCCGAGCATC
CACGGTGGAAACAGCGGCGTGAGCAGTTCACGGCATCTGCTTAACAGCAACCCTGGTGGC
CACTCTACACCACCTGCAAGGAGACGCAAGAGAGGAAGACACAACGCAGGTTGCTGTGAC
GGATGCGTAGGTTGTCTCATTACCATCGGCAAACTGCCGCTCGCGTCTGCGATCTGCATG
CTACTCATATGGATTGGAACAGGGATGTTCATAGGAGCAGGATGGGCGGTTCTTGATGAG
ACTCAAGATCTTTTTAATAAGTACGGACCCAAAGAAGGAAACCCTGCCATAGATGCCCCA
CCAGAATATTTCCTTGTCAGTGGGGGCGGTTTCGCTCAGAATTACGAGTTGAGGAACCCA
GAGGATTTAGGGAACCGAGTCCCGGAAGTATTTCTTGGCCTGCAGCGATCTTTTATCGGG
ATAATCCCGTTCATGTTCATCTTCTCCATAGCTGTCGTGGTGGATGGGGCAAACAGCACA
AAAGAAATCCATACAAAGGGAAAAGGTTGCAAAAGCTCAAGTGCTGGAATATGTTGTGGC
CTTGTCATACTTGCTGGTTCATATTTACTGCTCCTTTTCTGGGTGTTCTTTCTTTGTTTT
GTAACCCTCGGGGTATATTACTACAGGATAGTGATGCTACGCTGTGATGACCTGAATAAC
CGTGGTTTCAACGAAGCAGTTCAGAAAGATATCTGCATCGACCTTGTACAATCTGGATTC
ATCATGTTCAGAAATACCAATGATCAATATTTCGGAAAAATATGTGGTCCGGGCGACTCC
AGCAGAAATACTGTGGGAGACTTGAGCGGTTACTGCGATGCTTCTGAACATGCTTGGCAG
CTGATGTTAGTTTGTTTTGCTGGATGTCTTTTAAACGTGATAGCTATGATGCATTCCCTC
ATGATCACCACCGCCAACTACAACAAACTGCAACGTAAATATTCCAGACAGCAAAGACAC
GAAACTACAGCAAGAACTGTGTCTCCTGCTACGACTAGGCGGTCTGCACCTTCAACTATC
GCGCCTCCAGCTTATGTCGTTGGAACAAAAAATGGAGTCAATGATCAGAGGAGGCGATCG
CGAGACATCGAACTAGACTACATGGGTGACGACCACGAATTGGCTTCGAGCGGACGCCCG
CCCAGAAGGTTTGAAAATGATGACAGCCACGTGGGATTATTGAAGAGCAATCAGCTCAGC
TCATCTGTTACTTGGGTGTATTTGAGGCCAACAACTTTATTTTTTATAGTCTCCGCACCA
TTCTGA

InterProScan

PANTHER
Myelin_PLP (IPR001614) - T[70-366] 6.7E-45
Pfam
Myelin_PLP (IPR001614) - T[78-128] 1.6E-5 - T[173-352] 1.9E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value