- Transcript 'Cisavi.CG.ENS81.R172...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C5.392.v2....' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S38.g13165.01.t
Possible name(s)
RXFP1; RXFP2; TSHR
Gene model
Location
S38 [306,659 / 309,996]
Amino acid sequence
Length: 453
>Harore.CG.MTP2014.S38.g13165.01.p
MVGTNLTEFATKRDSFAQRSVVSIEKKLVCDASIACDDKSDEKNCSDDRFFCENESPLFV
LRKQVFDGRLDCSDWSDECPTNYLSRDSTVLHSRYEMISSLFLRVMVWIMALSALLGNTA
VIINVGGQMYREGLKYIPASLVANRLFILNLAVADFLMGIYLLGLAISGLTMQPFLSSTR
PKRSIVLLGMILSWIFSFTLALLPLSPLLQYYFTDHAILPDNPFTSMLKIDLVEARDAAK
RIIAFDLNKNTSLPAVRESLASSSTASWTQLRSMLSEFTAHPQYFEYTGYLGYYSINSVC
IPKFFVTASDRAWKFSFSVTLFNFVAFIFVASSYVWIYVKSARHQNIRSSVNKADGARLH
KIQGKILRLIITDFCCWMPICIIALCKISGAHVSDTAYAVAAIVLLPINSALNPIMYSDI
FDKMREFIFRKRQKCHSPLQNSSENNKTRQTQV
Nucleotide sequence
Length: 1,362
>Harore.CG.MTP2014.S38.g13165.01.t
ATGGTCGGGACGAATCTTACGGAATTTGCAACAAAACGAGATTCTTTTGCCCAGCGCTCG
GTGGTTAGCATCGAAAAAAAGTTAGTTTGTGACGCTTCGATCGCATGTGACGACAAATCT
GACGAGAAGAACTGTAGTGACGATCGATTCTTTTGCGAAAACGAGTCACCTCTCTTCGTA
TTACGTAAGCAGGTATTTGATGGACGATTGGATTGCTCAGATTGGAGTGATGAATGCCCA
ACAAATTATTTGTCAAGGGATTCCACTGTGTTGCATTCAAGATATGAAATGATTAGCAGT
CTATTCCTTCGTGTGATGGTCTGGATCATGGCACTGTCAGCATTGCTCGGGAACACGGCT
GTCATTATCAATGTCGGTGGACAAATGTACAGAGAAGGATTGAAATATATTCCTGCAAGC
TTAGTAGCAAATCGTCTCTTCATATTGAATCTTGCAGTCGCAGATTTTTTGATGGGAATT
TACTTACTAGGTCTTGCTATATCAGGATTGACAATGCAGCCATTTCTTTCTTCTACACGG
CCAAAACGATCAATAGTTTTACTCGGCATGATCCTATCCTGGATATTTTCGTTCACCCTT
GCTCTCCTTCCACTCTCTCCACTCTTGCAGTATTACTTCACTGATCACGCCATATTACCC
GACAATCCTTTCACATCAATGCTGAAAATCGATCTTGTGGAGGCGAGAGACGCTGCTAAG
CGTATCATAGCTTTTGATCTGAATAAGAACACAAGCCTGCCAGCTGTACGGGAATCTCTT
GCTTCATCGTCAACTGCCTCCTGGACTCAATTGAGATCAATGCTCTCGGAATTCACCGCA
CATCCCCAGTATTTCGAGTACACTGGTTATCTCGGCTACTACAGCATTAATAGTGTATGC
ATTCCCAAATTCTTCGTTACCGCTTCCGATCGTGCCTGGAAATTTTCGTTTTCCGTAACG
CTATTCAACTTTGTCGCGTTTATATTCGTTGCTTCGTCTTACGTATGGATATACGTCAAG
TCAGCACGTCATCAAAATATTCGTTCTTCAGTGAACAAGGCCGATGGAGCGAGATTACAT
AAGATTCAGGGCAAGATTCTCCGTCTCATCATTACTGATTTCTGTTGCTGGATGCCGATT
TGCATCATAGCTCTTTGCAAAATCTCCGGCGCTCACGTTTCAGACACTGCCTACGCCGTC
GCAGCCATCGTTCTTCTTCCGATCAACAGCGCCCTCAATCCGATTATGTATTCAGACATA
TTTGACAAAATGAGGGAGTTTATATTTCGTAAGAGACAAAAGTGTCACTCACCCCTGCAG
AATTCATCAGAAAATAATAAGACACGTCAGACACAGGTATGA
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[24-45] 0.00594825 - T[45-78] 9.14011E-4 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[26-169] 5.7E-66 - T[174-448] 5.7E-66 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[44-82] 3.07E-5 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[102-126] 1.8E-12 - T[144-165] 1.8E-12 - T[362-386] 1.8E-12 - T[399-425] 1.8E-12 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[117-417] 12.327 |
| Protein Name | Identity | Bit Score | e-value |
|---|