- Clone 'AHC0AAA209YN11' >
- Region 'REG00001277' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S391.g04860.01.t
Possible name(s)
DOC2B; RPH3A
Gene model
Location
S391 [17,748 / 26,291]
Amino acid sequence
Length: 684
>Harore.CG.MTP2014.S391.g04860.01.p
MLYIKLVDLSIAIIQMESSSWICPNDRHLSLRAKLRSGWSVRTGQGGRKGQSKLNEEELQ
QIQNVISRASMLENMEQERIGSLVHRLNIMQQNSMGNGQTSCILCGERFRKFSCNIPIIC
TDCKRKVCHKCSVDCGTNAKLLPIKTNQQVLTQNYMCKLCSENRELWKRSGAWFFHAIPV
HKLPAEETATSRQQTFDHSDSIKYRKIASLAPPDSPAFVRSHSRTLSGGSVGSYQWAKSA
KLCTPSASSSGEDSSDDGITLGKANKLKGLHSGVSIDTASLASTPSTNADHISVSSSSPA
GFSNKGSNRSSFRSVGSRHSSIRRRQKQQYMHHSTDDDSISIDSRSTEMSVDDMSTLHGG
VNNIPILKTEEASSADDKENNGYLEFSLLYDPLKSALHVNIIKGKNLCPKDSNGLSDPYV
KLHLLPGFSKATKLRTKTISKTLNPEFNETLVYWGIGEEELSTRKLQLTVLDEDRFSKND
FLGEVIIPLDEIVPTEKKFHDVPLKGMHILSSGDKMTKDPGRIHVGLRFNTNEHCLVITI
YRCANLIRNPTDNVNPFVKVSLALDNDKTMVQKTEIKKKNPNPEFNQEIKFKVPPENGHA
VVARGSLHISVFHKDALGQQLIGTMSLGVSSEGEKLRHWFNCLKHPNQQFDNWHTLLSES
PKKFKQRSPASGSSRKKKKDGRKA
Nucleotide sequence
Length: 2,913
>Harore.CG.MTP2014.S391.g04860.01.t
ATGTTATACATCAAGTTAGTCGATTTGTCTATTGCTATTATTCAAATGGAATCTAGTTCG
TGGATATGTCCGAATGATCGTCATCTATCTCTTAGAGCTAAACTCAGGTCGGGTTGGTCT
GTTAGAACTGGACAAGGTGGCCGTAAAGGACAATCGAAACTCAACGAAGAAGAACTACAG
CAAATTCAAAATGTTATCAGTAGGGCATCTATGCTTGAAAACATGGAACAAGAGAGGATT
GGTTCTCTTGTGCACCGTTTGAACATAATGCAACAAAATTCAATGGGAAATGGGCAAACG
AGCTGCATATTATGTGGTGAACGGTTTAGAAAATTTTCTTGCAACATACCAATCATTTGC
ACAGATTGCAAACGGAAAGTATGCCACAAGTGCTCAGTTGATTGTGGTACGAATGCCAAA
CTGTTGCCAATAAAGACAAATCAACAGGTTTTGACTCAGAACTACATGTGCAAGTTATGT
AGCGAAAACAGAGAACTGTGGAAACGTTCCGGTGCTTGGTTTTTTCACGCCATACCCGTC
CACAAACTCCCAGCAGAGGAAACTGCAACATCAAGACAGCAAACGTTTGATCATAGTGAT
TCGATAAAATACAGAAAAATTGCTTCGCTTGCTCCACCCGATTCACCTGCATTTGTGAGG
AGTCATTCCAGAACTTTATCTGGAGGTTCTGTTGGATCTTATCAGTGGGCAAAGTCTGCA
AAACTGTGTACACCAAGCGCAAGCAGTTCCGGAGAAGATAGTTCAGATGATGGAATAACA
TTAGGAAAAGCAAACAAGCTGAAAGGTTTACATTCAGGTGTCAGCATCGACACTGCGAGT
CTGGCTAGCACTCCTAGCACTAACGCTGATCATATTTCAGTTTCATCTTCTAGCCCAGCT
GGTTTCTCCAACAAGGGTTCCAACAGAAGCTCTTTCCGTTCGGTCGGGAGCAGGCATAGT
TCAATAAGGAGGAGACAAAAACAACAATACATGCATCACAGCACAGATGATGATTCAATT
TCTATTGACAGTCGATCCACAGAAATGTCGGTTGATGATATGTCTACTTTACATGGTGGT
GTGAATAACATTCCAATTCTTAAAACTGAGGAGGCATCTTCAGCAGACGATAAAGAAAAC
AATGGTTATCTGGAGTTTTCTCTTCTGTATGACCCACTCAAATCAGCATTGCATGTTAAC
ATAATAAAGGGAAAGAATTTATGCCCCAAGGACAGCAATGGTTTGTCCGATCCATACGTA
AAGTTGCATCTTCTTCCTGGTTTTTCGAAGGCTACGAAACTAAGAACGAAAACCATTTCC
AAGACTCTCAATCCTGAATTTAATGAAACTTTGGTTTACTGGGGAATAGGAGAAGAGGAA
TTGTCAACTAGAAAACTACAGCTGACTGTTCTTGATGAGGATAGGTTCAGCAAGAATGAT
TTCCTTGGGGAAGTAATCATTCCACTGGATGAAATTGTCCCAACTGAAAAAAAGTTCCAT
GATGTTCCACTTAAAGGAATGCACATTCTATCATCTGGTGACAAGATGACCAAAGATCCT
GGAAGAATTCATGTGGGTCTTCGATTCAACACGAACGAACATTGCCTCGTCATCACCATT
TATCGATGTGCAAATCTTATAAGAAATCCGACGGATAATGTCAATCCATTTGTCAAAGTA
TCACTTGCTCTTGATAATGATAAGACAATGGTCCAAAAAACAGAAATAAAAAAGAAGAAT
CCAAACCCAGAGTTTAACCAGGAAATAAAATTTAAAGTTCCACCGGAAAACGGACACGCT
GTTGTCGCGAGGGGTTCTCTTCACATATCTGTTTTCCATAAAGATGCCTTGGGACAACAG
TTGATTGGGACTATGAGTCTTGGTGTCAGTAGCGAGGGTGAGAAACTACGACACTGGTTC
AACTGCTTGAAACATCCAAATCAACAATTTGATAACTGGCACACGTTGCTGAGCGAATCT
CCAAAGAAATTCAAACAACGTAGCCCAGCATCTGGTTCATCAAGGAAAAAGAAAAAGGAT
GGCAGAAAAGCGTAATACTATTCACCATTTCTCATTATACTAGCTAAAATGATAAGCTAT
GTATACACAATATTTTTATCTCATTTAAAGATTTTGTGAATAGTAATTTTGATTAAATTC
TCCACATTTTTTTGACATTCTGTAATATTAACATCATTATATAGATTTTAGATGCTTTAA
TCATGTGATTCAAATTTTAGTTTCTTCAAGATGTTTCAAGTTCTATTAGAAAATAATTTT
TCATTACTATTATTTATATTCATACTAGACTATTAGTGGTGTCTCTCGTCCATGTAAGCT
GCAGCACTCCTTAATTCCACAGCCAGGTGTAAAATTTCTCAAGCAAGAGAATACACCTTA
GAGGAAGTTCTTTCCAATGCTCCACTGCAAACAACTGACTATTAAATTGTTTTTATAGGA
TTTCTGTATTGTATTATACATACTTTGCTAATGAATGACTGTATTTAAAGCACAAAGACA
ATATTTTTATACCAAAGGTATTGTTTCCAGTATTCTTATTGTGTTGTGATTTTACTGTAT
ACAGTGAAACCTTACGTATCTAACCTCCCTTTCTGCTTCATGTGTTGTTGTATTGTTTAT
TTCACTGTTCACACTTTCAACTGCTTGCTTTGCTTCAGCTATATTATTCATACTTCATTT
GTACAGCTGCTTATGCTTCAACAACTCAATGTCATCTTGCATTTTAGTGATCATAGTTAT
GGTGCAAAGAAGGTGTTAACACAATAATATATTCAGATGATGATGGTAGCTTCGTACTAG
TTTATTTCCTTGTTAATGTAGTATAGTTAGATTATGGTCCAAATACGCTTATTTTAAAGT
TGTTAACACAATAAAATATTCAGATACTATTTA
| PANTHER |
RBF-1 (IPR030541) - T[20-251] 1.6E-116 - T[276-659] 1.6E-116 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[46-189] 1.5E-27 |
| ProSiteProfiles |
Rab_BD (IPR010911) - T[48-177] 12.753 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[53-176] 1.17E-19 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[96-165] 8.71 |
| Gene3D |
C2_domain_sf (IPR035892) - T[361-508] 9.6E-41 - T[509-662] 6.2E-33 |
| PRINTS |
Synaptotagmin (IPR001565) - T[384-399] 1.9E-8 - T[399-412] 1.9E-8 - T[457-472] 1.9E-8 - T[477-487] 1.9E-8 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[393-486] 18.833 - T[536-626] 11.981 |
| SMART |
C2_dom (IPR000008) - T[396-501] 4.1E-20 - T[535-641] 1.1E-15 |
| Pfam |
C2_dom (IPR000008) - T[397-501] 2.4E-24 - T[536-641] 1.3E-16 |
| PRINTS |
C2_dom (IPR000008) - T[412-424] 7.0E-7 - T[441-454] 7.0E-7 - T[466-474] 7.0E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DOC2B_HUMAN | 42.295 % | 241 | 1.08E-72 |
| RP3A_HUMAN | 40.717 % | 223 | 1.85E-63 |
| DOC2A_HUMAN | 37.082 % | 213 | 2.57E-62 |