Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S392.g03781.02.t

Possible name(s)

CDPF1

Gene model

Harore.CG.MTP2014.S392.g03781

Location

S392 [645 / 1,969]

Sequences

Amino acid sequence

Length: 100

>Harore.CG.MTP2014.S392.g03781.02.p
MVIMSLGSKEEKNKELPVFQCSLCKLTAPYCYYGARPRGVRKLTFTENVYVMEDPFSADR
GILQLGGHCSVCNRVVCVDEKCSMYYTQSCDAYDRSVDSE

Nucleotide sequence

Length: 736

>Harore.CG.MTP2014.S392.g03781.02.t
TATTAGATTTTTATCAAGGATTATAACATCCCTATCCTACCAATAATAATTATATGATGG
TAAATTAACCTTCAATGGTGATCATGAGCTTAGGAAGTAAAGAAGAAAAAAACAAGGAAC
TTCCAGTATTTCAGTGCTCCCTGTGTAAACTCACAGCACCATATTGTTACTACGGAGCCC
GACCCAGAGGAGTGAGAAAACTAACATTTACAGAAAATGTATATGTGATGGAAGATCCAT
TCTCGGCAGATAGAGGGATACTTCAACTTGGAGGTCATTGTTCTGTATGCAATCGAGTGG
TATGTGTTGATGAAAAATGCAGTATGTACTATACTCAGAGCTGTGACGCCTACGACCGAT
CGGTTGATAGCGAGTGAATTTTGCATCGATTGCACGGAAAGCAATTTTCTTCAATTCCCT
ACCGAGGTGCAAGATAGAGTGAAGAAAGCACTCCATGGTAAAGAAGTGCATTAAAATGTA
TCAGACATTGTACACAGTAACACTTGTGAACATGTGTAGTTGCGTGTTTGTAAGATCGAC
TTTCTTTTACCAAAACATGTCATTTTCTAGTCCTTCCATTTCCACTCCTTCAAACAATCT
GTTGAAACATTTGCTTCCAAATGTATTGTAGTGTTGGTATGGATTGTCTCGACCAAGACG
TTGCATGCACAGCCAACAGAAGTATAATTTACATTTGTAACAAGTTATCTTGTTGCAACC
ATCAAATTTCTCAATA

InterProScan

PRINTS	Cys-rich_DPF (IPR018785) - T[17-29] 9.6E-13 - T[40-58] 9.6E-13 - T[62-83] 9.6E-13
Pfam	Cys-rich_DPF (IPR018785) - T[19-89] 8.8E-23

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CDPF1_HUMAN	46.053 %	78.2	4.09E-20