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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S50....'
  2. Transcript 'KH2012:KH.C2.150.v7....'
  3. Clone 'cigd022k13'
  4. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S394.g14037.02.t

Possible name(s)

PPP1R10

Location

S394 [69,411 / 82,737]

Sequences

Amino acid sequence

Length: 885

>Harore.CG.MTP2014.S394.g14037.02.p
MVILGMKTDLRDYSKSVTMATEEIVDPLSLLKLLSPMLNLKGGIAGTSEVTKIVGMMKVS
QKLVGHCIYLNIMRVTTSYEVLDKFITDGGWRLMNKWLSEAKETDNNPIVMEILKLLQRL
PLKIYHLRENNTPKIVKHFAKSSNSKIKSLASALMNCWLGIIRESSTPDVDEKKKNKDKK
KNKGDKPLKPIPLKNVAAKASDNERKNVTPVMKAPSFAKIRKTGLETELPPPKKKMKANA
DKKTIIGKRNSIDNEKDCPVPEKKLKAIADNKPKKITISEGFMDALNSASNPVPLPVKKI
KRKPLKGASSNNSGLGKTSPSLDVFAGDSTDFGAGELMNRLSPKGSESPVSTEAAKPKLN
KYGKPKKNVRWVMEERLVAIKYFEIDENERVNVTKFPFYNDPAMSKVLNRIQVDGRRVNV
STQSFKDAQHRELLFDRQQLMKGKMHIGESNDNRGDDWRKPLPIEDLEDLVVPGCNSIEK
DIQSEREKTVLTEIFLTKEMVPESPAEPDPEPYEILQPKVIPFDDENSVMETMEPEQEIG
STGDEIILKNMLTGIQSQNGDVDLTEKLKQILQTANAMTNVIPNQPSTEIQKDQPQQIQP
QDSNTIWQNGAGIQQGGNPQIMQPNMNGQNMPMGQMGFYGGPMQMMMPMQDPNYYGQNWN
AGHMQNPAMINGHQQYGNFNNPNWSGPRWRRGGPPQGKLIFRNHIVYLYYLKAHALAAQI
GEIGEEDGIIIIATEEDEILQHLVQIVHPSTKPVLQLTFCESTEIKTLGKRLQEVRKETN
FLCISPVTSVFSQYAKHFSFTTVVSIQEPRTKIKFPVVFVTSWKPLFVAKQLDFKSASGN
ALSGIKVAFFFSHPVLVFHSHHALLPRYYFTLPCCSMRCCQTLFL

Nucleotide sequence

Length: 2,690

>Harore.CG.MTP2014.S394.g14037.02.t
AGACGAATATTTATCTATACAATTAAAGCTCTATGGTAATTTTAGGAATGAAAACTGATC
TGAGAGACTACAGTAAATCTGTGACAATGGCTACCGAGGAGATTGTAGACCCATTGTCGT
TGTTGAAATTGCTTTCCCCAATGTTAAATTTGAAAGGCGGAATAGCAGGAACTTCGGAAG
TTACAAAAATTGTCGGAATGATGAAAGTTTCCCAGAAACTTGTTGGTCACTGCATATATT
TGAATATAATGAGAGTCACAACGTCGTATGAAGTTTTGGATAAATTCATCACTGACGGAG
GATGGAGGTTAATGAACAAATGGTTGTCCGAAGCAAAAGAAACAGATAATAATCCAATAG
TAATGGAAATTTTAAAGCTTCTGCAAAGGTTGCCACTGAAAATCTATCATTTACGCGAAA
ATAACACACCAAAAATCGTGAAACATTTTGCAAAGTCCTCAAATTCAAAAATCAAGTCAT
TAGCATCAGCTTTAATGAACTGTTGGCTTGGAATTATTCGTGAAAGTTCAACACCAGATG
TTGATGAGAAGAAAAAAAACAAGGATAAAAAGAAAAACAAGGGCGATAAACCACTGAAAC
CCATTCCACTGAAAAACGTTGCTGCTAAGGCATCAGATAATGAAAGGAAAAATGTGACCC
CGGTAATGAAGGCACCATCGTTCGCAAAAATTAGGAAAACAGGTCTTGAAACAGAACTAC
CTCCACCGAAGAAAAAAATGAAAGCAAACGCAGATAAAAAGACAATAATCGGTAAAAGAA
ATAGTATCGACAACGAGAAAGACTGTCCCGTTCCAGAGAAAAAACTTAAAGCGATTGCTG
ATAATAAACCTAAGAAAATTACAATATCAGAAGGCTTCATGGACGCGTTAAATTCGGCGA
GCAATCCGGTTCCTCTCCCAGTAAAGAAAATAAAACGAAAACCTCTCAAAGGCGCATCTT
CTAATAATTCTGGTTTGGGAAAAACAAGTCCTTCGCTCGATGTTTTTGCTGGCGACTCAA
CTGATTTCGGCGCAGGCGAGCTAATGAACCGACTGAGTCCAAAAGGCAGCGAATCTCCGG
TGTCGACAGAGGCCGCGAAACCAAAACTCAACAAGTACGGTAAACCGAAGAAGAACGTCC
GCTGGGTGATGGAAGAGAGACTCGTAGCAATTAAATATTTCGAAATCGACGAAAACGAAA
GAGTTAATGTGACAAAGTTTCCCTTCTATAATGATCCGGCCATGTCAAAAGTTCTTAATC
GAATACAAGTTGATGGCCGTAGAGTAAACGTTTCGACGCAAAGCTTTAAAGACGCACAAC
ACAGAGAACTTTTGTTCGACAGACAACAACTTATGAAAGGGAAAATGCATATAGGGGAAA
GTAATGATAACAGAGGGGATGATTGGAGAAAGCCGTTGCCTATTGAAGATTTAGAAGATT
TAGTGGTTCCTGGTTGTAACAGTATCGAAAAAGACATCCAGTCGGAGAGAGAAAAAACAG
TGTTAACGGAGATCTTCCTCACAAAAGAAATGGTCCCCGAATCACCCGCGGAACCCGATC
CTGAACCTTACGAAATTTTACAGCCGAAAGTCATCCCGTTTGATGATGAAAACAGTGTAA
TGGAAACCATGGAACCTGAGCAGGAGATCGGTAGCACTGGAGATGAAATCATTTTGAAGA
ATATGCTGACAGGTATTCAGTCACAGAACGGTGATGTCGATCTCACGGAAAAACTAAAGC
AGATTCTACAAACTGCGAATGCTATGACCAATGTGATCCCGAACCAACCAAGCACCGAAA
TTCAAAAAGATCAGCCTCAGCAAATTCAACCACAAGACAGCAACACGATATGGCAAAATG
GCGCAGGCATCCAGCAAGGTGGCAACCCTCAAATAATGCAGCCCAATATGAATGGACAAA
ACATGCCTATGGGACAGATGGGATTTTACGGGGGCCCCATGCAAATGATGATGCCGATGC
AAGACCCAAACTATTACGGACAGAACTGGAACGCGGGGCACATGCAAAATCCCGCTATGA
TTAACGGCCACCAGCAGTATGGTAACTTCAACAATCCTAACTGGAGTGGGCCAAGATGGA
GAAGAGGAGGTCCTCCTCAAGGTAAGCTGATATTCAGGAACCATATAGTGTATTTATATT
ATCTGAAGGCACATGCCTTGGCTGCACAGATAGGGGAAATTGGAGAGGAAGATGGAATAA
TAATAATAGCAACAGAAGAAGATGAGATTCTGCAACATCTTGTACAAATAGTGCATCCAT
CTACCAAACCAGTGTTACAATTAACATTTTGCGAATCAACCGAAATAAAAACGCTGGGTA
AACGCTTGCAAGAGGTCAGGAAAGAGACAAATTTCCTGTGCATATCACCCGTTACAAGTG
TCTTCTCCCAATATGCCAAACATTTCTCGTTTACCACTGTGGTTTCCATACAAGAACCGA
GAACGAAAATCAAGTTTCCTGTTGTTTTTGTGACGTCATGGAAACCGTTATTCGTCGCTA
AGCAACTGGATTTCAAAAGTGCATCTGGTAACGCTTTGTCTGGAATTAAAGTCGCCTTTT
TTTTCTCTCACCCGGTTTTGGTTTTTCACTCTCATCATGCATTACTTCCGCGATATTATT
TTACTTTGCCTTGTTGTTCCATGCGCTGCTGCCAGACTTTATTTTTATAA

InterProScan

SUPERFAMILY
TFIIS/LEDGF_dom_sf (IPR035441) - T[80-172] 1.96E-13
Gene3D
TFIIS/LEDGF_dom_sf (IPR035441) - T[92-179] 9.0E-9
ProSiteProfiles
TFIIS_N (IPR017923) - T[92-165] 14.087
SMART
TFIIS/CRSP70_N_sub (IPR003617) - T[93-164] 3.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PP1RA_HUMAN 35.626 % 222 1.48E-60