- Transcript 'Moocci.CG.ELv1_2.S65...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S396.g06258.02.t
Possible name(s)
ARHGAP15; SYDE1; SYDE2
Gene model
Location
S396 [49,255 / 63,622]
Amino acid sequence
Length: 1,390
>Harore.CG.MTP2014.S396.g06258.02.p
MSAVTPDPQQTNGFHSLSRLKRTLSLPLSKIKTRTQNHRETNKAAVSENHENPSVIVRAE
ENGNSHIGRGIIRNQSIFRSMRGPIGRKGDIRVSRIDTGTISNDVRLTLSQAGKLSAKNH
VSQISADCPHVEAPSEVEAQIEKNLPKFIGKKQKHSRARRWPTQVLAKVLEKIHGSGNME
HAAVVIRTIEIKRSASDILGIYIKQVKSVVRNHHSDVTTSSNKPHYRTAIIVSRLAPSSI
AEKQGELRTGDEVLFVNNVDIANLPIKHVAAIMDSSQTLVLIVRSKHGSINNNNVEKLSP
TSNGDVTHSLTYNLAYNKPQSTSTENSALLSPPRVSNGIMGVKGSRIVQLLPLDVPVTSV
YDNDYPSDIGDVSNKNPTKGKVEVEYEKAVGILLEAINGFESENKFSQSSCDAPIKKKGV
NPQSEWDLLTEIVSTMNITSPNADAICSSLQHGQRLPTTPNFPSISELNLQEEPDYDEVA
ASELGDLDSVICSSEEVGVDGYAELFPPPPHRSNSSSSSNGRPENENGFAQPLPSETCSR
KISRPGRSTINSNTTHAKLSRGLSHPATATEDEHKRSFKKSTSLENDSCYGDLMASQNNG
GRKILNSVTVGQRKGWFDKGAKVSMELQKRIEGNTRGRVDDQDGSVSGSDFSTVHGGQFN
VAVQSKSTKQHVASNPKDTVHDQNTWFRRNSGRTSSESSMASVPSRTDIHTSNKSTAEQD
SVPSSPDNVGFEKVSVSNGPEQRTGLKMNRNFPEPHSVDTKTALPIPESQTDAPSSSNRH
LFSKIMSPPRSRKNKLTKKFTKRIKMFGGHDTNDCSNSFEGNIPPMSPNVLSQVNRLHLE
IDLAQQRRLSRQFLLDNGRSSHDSSIKPLDLSEFKKYRPCISSQEAKCVQESIEGSLVIT
LYGARDMKKTMSEVYCVMQVDNNVQHRMRTTMKPCRGSVAWNECYEAKLEEAYELLITLY
TWEHKHKTLAKTVLPLASLLSKEDQSHPVKLAVKLESRGTLYIKLSLEDPSTLAGPKVFG
ASLQSILDEEQSGLPVPLIVHECIKEVEARGMSVVGIYRLCGSAIAKKELRRRYEEDAKT
LNLSQENYPDVNVITGILKDFLRELPQPLFPPELLEAITIAMENSSGSNVVTPVSSAFEP
TPVVEFPQYQSETEAKMSQSNHIRSLFEDDNKIHLPPAERATLYALLNHLKKVSANNAQN
KMTCQNLAVCFGPVLLGSINIGSKSLDLTAAIGFKRHIQVLNYMVSNWTEIPVPERTMVK
PEWDLDTDDKRKSKRMSRVSLTRRISYINPNSSSSSCVNIAGLGADIDNRSNSSIIRKSG
SLTNILENNFELSTPVEPIDMEKYLEQENRMVKEAALVKLASGHKTLIVSCACKSVYLHG
TRKSRHVFVT
Nucleotide sequence
Length: 4,785
>Harore.CG.MTP2014.S396.g06258.02.t
AGGTGTTTTATCAGATCACCTATCAAGACTTTGTGATAGGGCAAACTATTGATAATGTTG
AAATGAGTGATCAGAATCCATAATGAGTGCTGTTACTCCTGATCCACAACAAACGAATGG
ATTCCACTCTCTCAGTCGTCTGAAAAGAACACTTTCTCTGCCTTTGTCCAAGATCAAGAC
AAGGACTCAAAATCACAGAGAAACGAACAAAGCAGCCGTATCTGAGAATCATGAAAATCC
AAGTGTTATTGTAAGAGCTGAAGAAAATGGAAATTCGCATATTGGACGAGGAATTATCCG
CAATCAAAGCATATTCCGTAGTATGAGGGGACCTATTGGCCGTAAAGGTGACATTCGCGT
AAGCAGAATTGACACCGGAACGATATCCAACGACGTGAGGTTGACACTGAGTCAAGCAGG
AAAGCTTAGCGCCAAAAATCATGTATCGCAAATATCTGCAGATTGCCCCCATGTAGAAGC
TCCATCCGAAGTAGAAGCACAAATTGAGAAGAATTTACCGAAATTCATCGGGAAAAAGCA
AAAACACAGTCGAGCAAGGAGATGGCCAACGCAAGTTCTTGCGAAAGTATTGGAAAAAAT
TCACGGTTCTGGGAACATGGAGCACGCAGCAGTTGTTATCCGTACCATTGAGATCAAAAG
AAGCGCATCCGACATTCTTGGAATTTATATCAAACAAGTTAAAAGTGTTGTAAGAAACCA
TCATTCTGATGTCACAACCTCTAGTAACAAGCCTCATTATCGTACTGCAATCATTGTATC
AAGACTTGCCCCGAGTAGTATTGCAGAAAAACAAGGTGAATTGAGAACAGGAGATGAAGT
TTTGTTCGTCAATAATGTTGATATAGCCAACCTGCCAATAAAACACGTTGCCGCTATTAT
GGACTCTTCTCAGACACTGGTTCTCATTGTGCGATCCAAGCATGGCAGTATCAATAACAA
TAACGTTGAGAAGCTCTCGCCTACATCCAACGGAGATGTTACTCACAGTCTTACATATAA
TCTTGCCTATAATAAACCGCAGTCTACCTCAACTGAAAATTCTGCACTGCTTTCTCCGCC
TCGTGTATCTAATGGAATTATGGGTGTTAAAGGTAGCAGAATTGTCCAACTTCTGCCGTT
GGATGTTCCAGTAACCAGTGTTTACGACAATGATTACCCATCTGATATAGGGGACGTATC
GAACAAGAACCCAACCAAAGGAAAAGTGGAAGTCGAATACGAAAAAGCTGTCGGAATATT
GCTCGAAGCTATAAACGGATTTGAAAGCGAAAATAAATTCTCTCAATCATCATGCGACGC
TCCGATAAAAAAGAAAGGTGTCAATCCTCAGTCAGAATGGGATTTGCTTACAGAAATCGT
GTCGACGATGAACATTACATCTCCGAATGCCGATGCCATCTGCAGTTCTCTGCAGCATGG
ACAAAGGCTTCCCACTACTCCGAATTTTCCGAGCATATCGGAACTCAACTTGCAAGAGGA
GCCAGATTACGACGAAGTAGCCGCATCCGAACTGGGAGATCTCGATAGCGTTATTTGTTC
AAGTGAGGAGGTTGGAGTTGATGGATATGCTGAACTCTTTCCTCCGCCACCTCACCGATC
AAATTCATCATCTAGCAGTAATGGTAGACCGGAAAATGAAAATGGCTTCGCTCAACCCCT
GCCTTCGGAGACATGCAGTAGAAAAATTTCTCGGCCAGGAAGATCCACAATAAACTCCAA
CACAACTCATGCTAAGCTATCGCGTGGACTGTCTCATCCAGCAACAGCCACAGAAGATGA
ACATAAAAGGTCGTTCAAGAAGTCTACATCTCTTGAAAACGACTCTTGTTACGGTGATTT
AATGGCATCTCAAAATAATGGTGGCCGGAAAATCTTAAACAGTGTTACCGTAGGACAGCG
AAAAGGGTGGTTCGACAAAGGTGCCAAGGTATCCATGGAGTTGCAAAAGAGAATCGAAGG
AAACACTCGGGGTCGAGTAGATGATCAGGATGGTTCTGTCAGTGGTTCAGATTTTTCTAC
TGTACACGGTGGGCAGTTCAACGTCGCAGTGCAGTCAAAGAGTACTAAGCAACATGTTGC
CAGTAATCCTAAAGACACTGTCCATGATCAAAATACTTGGTTTCGTCGAAACAGCGGGAG
AACTTCGTCTGAATCATCAATGGCCAGTGTTCCATCTCGAACAGATATCCATACCTCAAA
TAAGTCCACTGCCGAGCAAGACAGCGTGCCGAGCTCACCAGACAATGTTGGATTTGAGAA
AGTTTCTGTGTCTAACGGTCCAGAGCAGCGGACTGGTCTCAAGATGAACAGAAACTTTCC
AGAGCCCCATTCGGTAGACACAAAAACTGCACTACCAATCCCAGAAAGTCAAACAGATGC
ACCGAGTTCATCGAACCGACATCTCTTCTCGAAGATAATGTCACCTCCCCGCTCTCGCAA
GAATAAGCTAACAAAGAAATTCACGAAAAGAATTAAAATGTTCGGAGGACACGATACAAA
TGACTGTTCGAATTCCTTTGAAGGAAACATACCACCGATGTCACCAAATGTGTTGTCCCA
GGTCAACCGCCTCCATTTAGAGATCGATTTGGCTCAACAGCGCAGACTAAGCAGACAATT
TTTGCTAGACAACGGTAGATCTTCTCATGACTCTTCAATAAAGCCACTAGACTTATCCGA
GTTTAAGAAGTACAGGCCATGTATTTCGAGCCAAGAAGCAAAATGTGTACAAGAATCAAT
AGAAGGTTCTTTGGTAATAACGCTGTATGGCGCCCGCGATATGAAAAAGACTATGAGCGA
AGTCTACTGTGTTATGCAAGTCGACAATAACGTCCAGCACAGAATGCGAACTACTATGAA
ACCGTGCCGAGGTTCCGTTGCCTGGAACGAATGTTATGAGGCCAAGCTCGAGGAAGCTTA
TGAACTCCTTATAACATTGTACACATGGGAACACAAGCACAAAACTTTGGCCAAGACAGT
GTTGCCTCTTGCGAGTCTGCTGTCTAAAGAAGATCAAAGCCACCCAGTTAAACTCGCGGT
CAAATTGGAATCTCGAGGGACCCTCTACATAAAGCTAAGTCTGGAAGACCCTTCTACGTT
AGCCGGTCCAAAAGTGTTCGGTGCAAGCTTGCAAAGCATATTGGACGAAGAGCAGTCTGG
TTTGCCTGTCCCTCTGATAGTTCATGAGTGCATAAAAGAGGTCGAAGCTAGAGGAATGTC
GGTTGTGGGAATATACAGACTGTGCGGATCAGCGATAGCAAAGAAGGAGTTACGCAGGAG
ATACGAAGAAGATGCAAAGACCCTCAACCTTTCGCAGGAAAACTACCCTGATGTGAATGT
CATAACTGGCATTCTTAAAGATTTCTTACGTGAGCTGCCCCAGCCTCTATTCCCTCCGGA
GCTGCTAGAAGCTATTACAATTGCAATGGAAAATTCATCAGGATCGAACGTGGTAACTCC
TGTTTCTTCAGCCTTCGAACCGACTCCGGTCGTTGAATTTCCTCAGTACCAGTCGGAAAC
GGAAGCCAAAATGTCCCAATCGAACCACATCCGGTCGTTGTTTGAGGACGACAATAAAAT
TCATCTTCCGCCCGCTGAAAGAGCGACCCTGTACGCTCTTCTCAATCATTTGAAAAAAGT
TTCGGCCAATAATGCACAAAATAAAATGACTTGCCAAAACCTGGCTGTATGCTTTGGTCC
TGTACTGCTGGGATCTATCAATATTGGATCAAAAAGCCTGGATCTTACTGCTGCCATCGG
TTTCAAGCGACACATTCAAGTTCTCAACTACATGGTTTCAAATTGGACAGAAATTCCAGT
CCCTGAAAGAACGATGGTTAAGCCTGAATGGGACTTAGATACAGATGACAAAAGAAAATC
CAAAAGAATGAGTAGAGTGAGCCTGACGAGGCGTATCAGTTATATCAATCCCAATAGTTC
CAGTTCATCTTGTGTCAACATAGCTGGTTTGGGGGCTGACATTGACAACAGAAGTAACAG
CAGCATAATTCGTAAAAGTGGATCGCTGACAAATATTTTGGAGAACAACTTTGAATTGTC
CACACCAGTAGAGCCGATTGACATGGAAAAATATCTAGAACAGGAAAACAGGATGGTGAA
AGAAGCTGCTCTGGTAAAACTTGCATCAGGCCACAAAACTCTCATTGTGAGTTGTGCCTG
CAAATCTGTTTACCTACATGGCACGAGAAAATCTAGGCATGTCTTTGTAACATGACATTC
CTGTCGCTAACCAGCTTCATTGAACCATAAATCACCAAAAAAAGAAACGCTGAAGTTGTT
GAGGTGTCCAATGCAAACAATAACCTTATACACAAGGAACAAAGGTTAAAATATTTGGGA
AGATATTATTGTTCACGGAATATGTGAGTTATGACCTAAGGCGAAAAGTTAACATTTAGT
TCGGGTGATTTCAGAAAAAATAGGTTCATGAAAGGTCATCTAGGTCAAAGGTCTATCTAG
CCTAACCAAGGTAAACTGGTGGGCGCACTGCTTGCATGTGCTGTACACAATTTCCATTTA
TTAAGGTTGTTACATGTGTCTGCTGACATTCTGTTTAGTGTCATTGTAATATACTGTCCT
TATAAACCAAGTGATGCCAGAGTATATTACAGCCATGCACTGTATATAGTTCATTCAGGC
CACGCCTGATCTTGTATACTTTCGGGGCCCACGAAGAATGAAATAGAAATAAAAAATCTG
ACTGGAGAACGGGATGTAGAAGTCGCAACCTACCATCGAGCAGAT
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[179-286] 5.59E-13 |
| ProSiteProfiles |
PDZ (IPR001478) - T[188-288] 13.33 |
| SMART |
PDZ (IPR001478) - T[197-287] 8.3E-8 |
| Pfam |
PDZ (IPR001478) - T[218-283] 5.4E-8 |
| Gene3D |
C2_domain_sf (IPR035892) - T[877-1009] 1.2E-9 |
| Pfam |
C2_dom (IPR000008) - T[895-989] 3.5E-5 |
| SMART |
C2_dom (IPR000008) - T[896-988] 1.6E-4 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[1015-1119] 8.63E-41 - T[1155-1251] 8.63E-41 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[1017-1256] 6.2E-49 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[1021-1252] 41.264 |
| SMART |
RhoGAP_dom (IPR000198) - T[1034-1249] 7.2E-46 |
| Pfam |
RhoGAP_dom (IPR000198) - T[1037-1218] 3.2E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYDE2_HUMAN | 36.643 % | 245 | 3.46E-66 |
| RHG15_HUMAN | 30.126 % | 114 | 2.26E-26 |
| SYDE1_HUMAN | 34.689 % | 203 | 2.59E-54 |