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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...' > 
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S397.g08282.01.t

Possible name(s)

NOC3L; NOC4L

Gene model

Harore.CG.MTP2014.S397.g08282

Location

S397 [63,915 / 67,774]

Sequences

Amino acid sequence

Length: 694

>Harore.CG.MTP2014.S397.g08282.01.p
MVKTECWRHKIYVIMPNLIPEIEKRSSCNSKNYTSFDIVAVRITRCLYFLDPQKTNIKMV
IKSHAKHRMQSRKRSWHNEAKYEKKVRRTFTPDEEVIATKKLRPLLPIKEKSGVLVKQFT
DDDVQEKAVEENQISSVPENEMITAEKQVTLDPLTQAKMSLQDSKNKIAKICSDIVNDPE
KQFRSLKTMQQMIWTKDPPEICAVIRKLVIASLNCVFLDIIPGYRIRARTEEEKDVKLSK
KVKSLIEFEESLLHYYQIYLQDLEKIIKRKDKRAKSSISGKKDDHEVIMLAVRSLCELYE
KLPHFNFHNNIAVVLVPLTNDKDKTISELCCNAVISLFRSDKSGESTLSTITVLCKLIKD
TSGSRKEIRPEVLDTLLSLPINHVDFDAMSISGKSKPSIGEKKKMAQEKKKLSRGQLKYR
KRQEKLESELKATEAMEKRETVLKYHTEIIQQVFLVYFRILKQKKDQGRPEKLVNSVMEG
LSQFAHLINIDFFSDLIQVLQNLISSGELNQRQSLCCIATAFKVLSGQGEALNIDPAEFY
KHLYNSLFDLLDTLEQQKTREKNKCDIASDLTLMVECLNIMLNQRRKQITLSRLLAFIKR
LATLALHMYPSSSTQVILDSVVNLLKCNSKTNALFDIESQTKGVYLPELPDPEHCGASSA
CIWEIHALRRHYCPEISKEASKIVRDFIREQQGH

Nucleotide sequence

Length: 2,965

>Harore.CG.MTP2014.S397.g08282.01.t
ATGGTTAAAACCGAGTGTTGGAGGCACAAGATTTATGTGATAATGCCAAATTTAATACCA
GAGATTGAAAAGAGATCATCATGTAACTCCAAGAACTATACGTCTTTCGACATCGTTGCC
GTACGAATTACTCGATGTTTGTACTTTTTAGATCCACAAAAAACAAATATTAAAATGGTA
ATAAAATCACACGCTAAACATCGAATGCAGTCACGAAAGAGGAGCTGGCACAACGAGGCT
AAATATGAAAAAAAAGTCCGTAGAACATTCACTCCAGATGAGGAAGTGATAGCCACAAAA
AAGTTGCGTCCCTTGTTGCCTATAAAGGAGAAGTCGGGAGTATTGGTTAAGCAGTTTACA
GACGATGATGTTCAGGAGAAAGCTGTTGAAGAAAACCAAATATCATCTGTTCCAGAAAAT
GAGATGATAACAGCAGAGAAACAAGTGACATTAGATCCTCTAACGCAGGCTAAAATGTCA
CTTCAAGATAGTAAGAATAAAATTGCCAAGATATGCTCCGACATTGTTAATGATCCAGAG
AAACAATTTCGCAGTCTCAAGACAATGCAACAGATGATATGGACCAAAGATCCACCAGAA
ATTTGTGCAGTCATCAGAAAATTAGTGATCGCTTCGCTAAATTGTGTATTCCTCGATATA
ATTCCAGGATACAGGATAAGAGCTCGTACAGAAGAGGAGAAAGACGTGAAGCTAAGTAAA
AAAGTTAAATCTTTGATCGAGTTTGAAGAAAGCCTACTGCACTATTATCAAATTTATCTT
CAAGATCTTGAAAAAATCATTAAAAGAAAGGATAAACGTGCAAAGTCATCAATTTCCGGT
AAAAAAGATGATCATGAAGTTATAATGCTCGCTGTAAGATCGCTTTGTGAACTCTATGAG
AAGTTGCCACATTTCAACTTCCATAACAATATCGCTGTAGTGCTTGTACCACTTACGAAC
GATAAGGACAAAACAATATCTGAATTATGTTGCAACGCGGTTATTAGCTTGTTTCGAAGT
GACAAATCTGGAGAATCAACTCTATCAACTATTACGGTTTTATGCAAACTGATCAAAGAT
ACGAGCGGTTCTAGGAAAGAAATTCGCCCTGAAGTTCTGGACACTTTACTCTCGCTCCCG
ATAAACCACGTCGACTTTGATGCGATGTCAATCTCTGGTAAATCCAAACCGAGTATAGGA
GAGAAGAAAAAAATGGCACAGGAGAAGAAAAAATTGTCAAGGGGGCAACTCAAGTATCGT
AAAAGACAAGAAAAACTTGAGAGCGAACTTAAAGCTACAGAGGCGATGGAAAAACGGGAA
ACCGTATTGAAATATCATACGGAAATCATTCAACAAGTTTTTTTGGTTTACTTCAGAATT
TTGAAGCAAAAGAAGGATCAAGGAAGGCCCGAGAAACTTGTCAATTCAGTAATGGAAGGA
TTATCCCAATTCGCTCACCTCATAAACATTGACTTCTTCAGCGATTTGATACAAGTACTG
CAAAACCTAATCTCGTCCGGGGAGCTGAACCAAAGACAGAGCCTGTGCTGCATAGCTACT
GCTTTCAAGGTATTATCAGGACAGGGAGAAGCACTCAATATAGATCCGGCAGAGTTCTAC
AAACATTTATACAATTCCCTGTTCGATTTGCTGGATACGTTGGAGCAGCAAAAAACAAGA
GAAAAAAACAAATGTGATATAGCATCCGACCTGACACTAATGGTGGAATGTTTAAATATA
ATGCTCAATCAACGACGTAAACAGATCACTTTAAGTCGACTATTAGCATTCATAAAGCGT
TTAGCTACGCTGGCATTACATATGTACCCGTCGAGCAGTACACAAGTTATATTGGATTCT
GTTGTGAATCTGCTTAAATGCAACAGCAAGACCAACGCGTTGTTTGATATTGAATCACAG
ACTAAAGGAGTGTATCTGCCTGAGTTACCAGATCCTGAACATTGTGGCGCTTCATCAGCT
TGCATTTGGGAGATTCACGCTTTGCGAAGGCACTACTGTCCAGAAATAAGCAAAGAAGCT
TCAAAAATAGTGCGGGATTTTATACGAGAGCAACAGGGACACTGATTATTAAGATTGCCA
CCGTCTTATACTGCAGGCTTCGTATTACGCCATTTAGTTTTCTAATAAGTGGCATGCATT
TTGCATATGTTATCAATAAAAGTGAGGCTATATATGTACTTGTGTTGTTTATCTCTGTAA
GGTGCAATGCGTTTCGACAATGAAACGTGGTGACATTTCGTAATCTCGGTATACGATAGT
CAGGTTGAGATTGATAAACACCGCAACGTTGAGATAATTCGGTTGATGTATAAAATCACC
CACATGCGTAGAGAAATTTATTTTGAAGACGCCTAATCCGGAATGCAAAAACGCATAAAA
TATTTTCCGCGAGATGGAGCTATTTATCCAATTTCGAGTTGACAGAATGGTTTCGGTACA
TTCCGCAAACGCTTAGGTGCGTTGTGAATTTTGTGGTAAATCCGTAGTATCTGGTCGGCA
TCGTCAGTTCCGTGGGCGGCCTGCTTCCGTAGTCAGAACCAGTCGTGCGATAAAGAGCGT
CGATTTTTATGCCATATCCCTGGAATTTACTCGCGTCCTCAAATCTCGCTGGTAGGATCC
CGAGCTCTTTCTTTGTTTTCAAAACCTTTTTAGGCTTTTGTATCTCTTCTTCCTCTTCGT
CACTTTCTTCAGAGAGTTGGACGTCTTTTGGTAGAGCAGGGCATTTCGCTTCTGCTACGT
GAGTGTCACTTTCCAGGAGCTGACTCGAAGAAGAAAGATCGGCTCTCAGGTCCTCTTTAC
TAGCGGATTCTTTTAGAGGAACACGAAGACTACTACAGTCGCTGTCAGTGTTACCGAACC
GAACGCGTTTGTCTGCCAAGGCCATTAGGAACTGTCGACAACCAGCCAAATTGAGTAAAA
CTTGGATGTGTAAGTGTGAGACATC

InterProScan

Pfam
Noc3_N (IPR011501) - T[164-259] 1.6E-26
SUPERFAMILY
ARM-type_fold (IPR016024) - T[174-198] 6.2E-10 - T[246-381] 6.2E-10 - T[450-559] 6.2E-10 - T[594-631] 6.2E-10
Pfam
CCAAT-binding_factor (IPR005612) - T[514-678] 2.4E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOC3L_HUMAN 41.719 % 432 3.94E-141