- Transcript 'Moocci.CG.ELv1_2.S44...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.S588.2.v1....' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S39.g07411.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S39 [198,553 / 219,061]
Amino acid sequence
Length: 853
>Harore.CG.MTP2014.S39.g07411.01.p
MSFSPSFDHKLVGRIKIYAVEHKIVIVDRMAADLQEKYNRDYGRRKKNAFRKLVGMVYES
MKKTEFKKEDDVHLKKRRKTDADKGSSSDSPNDEEETFAEYQDHNMLNSSVTSLYEKQIK
LEPKPPTNCTSYEYSNVVAVPSPDPANHRKKWYIDTHPSKPSVLLTENDIQVTFEDKNNN
IQSEISKIVLTNVEENKEMILKTPKSSETPKNKRLKTPKSHKKKEDVDLDIKGSEKVKTF
TLQASNVKFEDVGGNEKTIRELCKLLVHMKHPEIYRTLGVIPPCGVLLHGPPGCGKSLLA
NAIAGELELPMIKLAATEIVSGVSGESEQKLREVFEMALASSPCIIFIDEIDAITPKREI
ASKDMERRIVAQLLSSLDNLNSSLCQILVIGATNRPDSLDPALRRAGRFDREICLGIPDE
KAREGILRVLCKKMKLESNFNYSLLARLTPGYVGADLMSLCREAAMFSVDRIFTDLHHKN
KMRVQEMDGEGMDIEGKDLSNNKTEIKEKKSSDDVTKYAELSTFELLIWLRETTPLTDEQ
LNAVLIEFSDFELALTVVQPSAKREGFATVPDVTWDDVGALEDVRDELTVAILAPVRNPA
AFAALGLSKPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQ
CFERARASSPCVIFFDELDSLCPRRSGAETNSTARVVNQMLTEMDGLETRKQVYVMAATN
RPDIIDPAVMRPGRLDKTLYIGLPSSEDRYKILQTITKNGTKPPISADVSLENIAEDERC
SRFTGADLSSLVREAAVTALRDQISTKHVLSDEKVDLQISVKAEHFERAFTKVKPSVSLK
DESRYLKMKGDLK
Nucleotide sequence
Length: 4,327
>Harore.CG.MTP2014.S39.g07411.01.t
AAGGTTGGCAGAATGAATTTATATTATTAATTTGCAAAAGAAAACAATAACATTATAATA
ACTATTGTTTCATCAGGATCTTTCAGTGTTGCTGGTTCCAATTCAAGCAGATATTTTTAC
AGATGATGAAGAGATTCCGAGTCTCCTGAAAAAGATTTTGCACATTTAAATATAAAAACG
AGGATGCCAGGGTGAGTTTATTCCAATTTTGATTTCGGATTATTTACAGCAACGTAATGA
TAAGCAACCACCAGAAGAAACAATGTGACGCCCAACATGTTGGCAAAAATCGCAAGTTGA
ATATCGGTTATCATGATGAGATTCTTATCTAATTTCTACTAAATAATTTAGCTGATGATA
TCGCTGTCACGCAGTTCTCGAAGTGACTTCCGTGTTATTTCGGCAACGTCATCATTTAAT
TCCCATGACGTTTGACCGTAGGTTAAAGTTCGTAGGTTTATTTTACGTGTTAACATTTTC
TCCACTCATGATCTTGCAGTACTTATTGTAAAATTGGTTTTGCTCATCGCCGTATTAAAT
TCACTATTTTTAAGAACCCATCTAGGACGCTAAGTGGGGACCCGAAATTATTCTCTAAAT
CTCACCTTTCAGTGCATAGTTCATAGGTTATATGACGTCAATCATCGCACATGTTTGAAG
GGAAATCACCGAGATTCGCAGCAAATTTCAACGAAATAAATTGATTTACGGAATTTTCGT
TCGTTACGATGTCATTCTCGCCATCTTTTGATCATAAACTTGTCGGGAGGATTAAAATTT
ATGCCGTTGAACACAAAATAGTAATTGTAGATCGTATGGCGGCTGATTTGCAGGAAAAAT
ATAATCGCGATTATGGACGGAGGAAAAAAAATGCCTTCCGGAAACTGGTTGGGATGGTCT
ACGAAAGCATGAAGAAAACTGAATTTAAAAAAGAAGACGATGTTCATTTGAAAAAAAGAA
GAAAAACAGATGCAGATAAAGGAAGTTCATCAGATTCTCCCAATGATGAAGAGGAAACAT
TTGCAGAATACCAAGATCATAATATGTTGAATTCATCGGTGACTTCACTGTACGAGAAAC
AAATTAAACTGGAACCAAAACCACCGACTAACTGTACCTCATATGAATACAGTAATGTTG
TTGCTGTACCTTCCCCTGATCCAGCAAATCACAGAAAGAAATGGTACATTGATACTCATC
CGTCAAAGCCTTCTGTACTCCTAACTGAAAATGATATTCAAGTAACTTTTGAAGACAAAA
ACAATAATATTCAGTCTGAAATATCTAAAATTGTCTTAACCAATGTTGAAGAGAATAAAG
AAATGATTTTGAAAACTCCAAAATCATCTGAAACTCCCAAAAACAAGCGTCTGAAGACTC
CGAAGTCGCACAAGAAGAAAGAAGATGTCGATTTAGATATAAAAGGAAGTGAAAAAGTGA
AAACTTTCACTCTACAAGCGTCAAATGTTAAATTCGAAGATGTGGGAGGGAATGAGAAGA
CGATAAGAGAACTTTGCAAACTCCTCGTTCATATGAAACATCCAGAGATTTACAGAACTC
TTGGAGTTATTCCTCCATGCGGTGTTTTGTTGCATGGTCCTCCTGGTTGCGGGAAATCGC
TGCTCGCTAATGCCATCGCTGGTGAACTTGAATTGCCAATGATCAAGTTGGCCGCAACTG
AAATAGTGAGCGGAGTGTCTGGAGAGAGTGAGCAGAAATTAAGAGAAGTATTTGAAATGG
CTCTCGCAAGTTCACCATGCATTATTTTTATAGATGAAATCGATGCGATAACTCCAAAAC
GAGAAATAGCTTCGAAAGACATGGAACGTCGTATCGTTGCACAATTGCTCTCAAGTCTTG
ATAATCTGAATTCATCACTTTGTCAGATTCTTGTGATTGGAGCTACGAACAGACCGGATT
CACTCGACCCCGCTCTACGCAGAGCTGGTAGATTTGATCGTGAGATTTGTTTGGGAATAC
CCGATGAAAAAGCGAGGGAAGGAATTTTGAGAGTTCTTTGTAAAAAAATGAAACTGGAAT
CCAATTTTAATTATTCACTTCTCGCCCGATTGACACCTGGATACGTTGGTGCCGATCTCA
TGTCGCTGTGTCGGGAAGCCGCAATGTTTTCGGTCGATAGAATATTCACTGATCTTCATC
ATAAAAACAAAATGCGCGTTCAAGAAATGGATGGAGAAGGAATGGATATAGAAGGAAAGG
ATCTGTCAAATAACAAGACTGAGATTAAGGAAAAAAAATCTTCAGACGACGTTACTAAGT
ATGCTGAACTTTCGACCTTTGAGCTGCTGATCTGGCTCCGTGAAACAACTCCTTTAACAG
ATGAGCAGTTGAATGCAGTTTTGATCGAATTTTCTGACTTTGAACTTGCTCTTACTGTCG
TACAACCCTCTGCAAAACGTGAAGGTTTCGCAACAGTTCCGGACGTGACGTGGGATGATG
TCGGTGCACTGGAAGATGTCAGAGATGAATTAACAGTTGCAATTCTTGCTCCTGTACGAA
ATCCAGCTGCATTTGCTGCTCTTGGACTCAGCAAACCGCCTGGTATTTTACTCGCCGGCC
CGCCTGGCTGTGGCAAGACTCTGCTTGCGAAAGCAATCGCAAATGAATCTGGAATCAACT
TCATTTCCGTCAAAGGACCTGAACTGTTGAATATGTACGTGGGTGAAAGCGAGAGAGCTG
TTCGACAATGCTTCGAAAGAGCGAGAGCTTCATCGCCTTGTGTTATATTCTTCGACGAAC
TGGACTCCCTTTGTCCGAGACGATCTGGTGCTGAGACAAATTCGACAGCTCGTGTTGTCA
ATCAAATGTTGACTGAAATGGATGGTTTGGAAACAAGAAAGCAAGTTTATGTTATGGCAG
CAACAAACAGACCTGATATAATAGATCCGGCTGTAATGAGACCTGGACGCTTGGACAAAA
CTTTATACATCGGTCTTCCGTCATCAGAGGACAGATACAAGATCTTGCAGACGATTACAA
AGAACGGAACAAAGCCACCGATATCTGCTGACGTATCACTTGAAAATATTGCTGAAGATG
AAAGATGCAGTCGATTCACTGGGGCTGATTTATCCTCTCTAGTTAGAGAAGCTGCCGTTA
CGGCATTACGAGATCAAATCTCAACGAAACACGTTCTAAGTGACGAAAAAGTTGACCTCC
AAATTTCTGTAAAAGCTGAGCATTTTGAAAGAGCTTTTACCAAAGTGAAGCCGTCCGTTT
CGTTGAAAGATGAATCCAGATATTTGAAGATGAAGGGAGATCTCAAGTAAAAGACGACGA
GAAGGAGGTGACTGATCGGTTTTGTGTTGTTTGGTGCAGCGGACTCAAATCAGACGAATT
CAAATCGTCAGGCCACACAAACACGAGAAAGATTTACTAGCCCGAGGGCAAGGTACAGGT
GAATCATGTTTCACGAGCTAAAATTTCTGTTTATTTTAAAATAAAATATAACTGGTGACT
TCATGCAGAGGCATAACTAATTTCACGGCATGTCGGAAAGAAGTTTTTCCAACATTTGAT
GCTGGTAAATGGCGTTCTGGTTTAAGCAGCACCTTTTTTTGCTATAAACACACTTGCATA
CTCAGCTTGTTATATCTTAATTTGGGTTATTGATACAATTTGGAGATAGAAATGGGGGAC
ACGCCTATTCAAGGAGAATCGAAACGGGTCTGTGCAGGACATTACGTTTCCAGTTTACGT
CAATTTTATACCAGAAGTTTATGTATCTTAATTTGACTGGGTTATTAATACAAAGTAATC
TTCATATCCAGAGTATATAGTCACAAAATGGCCCACAGGAGCTTCGATAACAATATTATG
AAACGAAAAATATCACTGAACGGATACTCGTATTATCTAACATTCTCGTAAAATCAAAAT
CTCGCAAAATAGATCGCTCGTAAATAGTAGGTACTTAGACTTACTTACGAGGCGTTTACT
GGTTTAGAAGTTGCTCGTTGTTCTTATGCGATTATAAACAATGGTCTCGATGTGATTAAC
GTCTAATATAATGAAGGTATAGACATGCAATGAGTTATGCAGTAATGCACTGATCTCCTT
TCTTTAATCAAAGGGCGGGGTAATTTCTTTGTAATTCATAACAATTGTATTATTGACTTG
ATCCACCAGGACACCAACAGCCCTAAACAAAGTTTTCATTTTATAATGGGGGAAAGGTCC
ATGCCTCCTTGTCAGAGGGTCCCCAGACTAGGGGCTCCATTTAAAAAAAGGAAATTTAAA
AAACTAAAGGCACCACAACACTTCATACCTTATCTGATCACCAGTAATTTATATCACTAT
GGTCTAT
| Gene3D |
NLV2_N_sf (IPR038100) - T[3-68] 3.6E-13 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[8-64] 4.2E-14 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[246-480] 1.45E-60 - T[571-847] 4.25E-66 |
| SMART |
AAA+_ATPase (IPR003593) - T[282-419] 4.2E-22 - T[609-745] 3.7E-22 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[286-415] 2.1E-41 - T[613-742] 3.9E-47 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[387-405] . - T[713-731] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 38.564 % | 387 | 4.2E-121 |
| TERA_HUMAN | 41.071 % | 452 | 8.02E-147 |
| NVL_HUMAN | 53.714 % | 885 | 0 |