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  1. Molecular Tool 'Gli-MO (Imai 2009)'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Phfumi.CG.MTP2014.S3...'
  4. Transcript 'Boschl.CG.Botznik201...'
  5. Transcript 'Harore.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S39.g11254.01.t

Possible name(s)

RNASEH1

Location

S39 [76,037 / 76,946]

Sequences

Amino acid sequence

Length: 302

>Harore.CG.MTP2014.S39.g11254.01.p
MPPGRKNRTFYAVHKGRKPGVYHTWPACQDQVKNYGSAKYKKFGVLAEAEHFVKHGVIEE
IPNTSNERPENLKDFTTETLLEIFGEENDFSDVEAKQTLNMKRQNSFLEDNGANIIPRKK
LKSNQKTKKYENEDNSPAPSSSAGNLTMDSESRVIVYTDGACSNNGNYRKEIRAGYGVWW
GIDHPLNVSARLTGTPTNQRAEIAAVNKAIQQAINKGIKTLCIRTDSMFIINCVTKWVKG
WLKKNWIKADGKPVVHKKEFLIMLDALKKVDVKWEHVRGHAGVTGNEMADQLAVSGAKKP
LP

Nucleotide sequence

Length: 909

>Harore.CG.MTP2014.S39.g11254.01.t
ATGCCGCCTGGTCGTAAAAACAGAACTTTTTATGCCGTTCATAAAGGACGTAAGCCAGGC
GTTTATCACACATGGCCAGCATGTCAGGATCAAGTGAAGAACTACGGTTCTGCAAAATAT
AAAAAGTTCGGAGTCCTGGCAGAAGCAGAGCACTTTGTTAAGCATGGTGTCATAGAAGAG
ATCCCAAATACATCCAATGAACGGCCTGAAAATTTGAAGGATTTTACAACAGAGACTTTG
CTGGAAATATTTGGTGAAGAAAATGATTTCAGTGATGTTGAGGCGAAACAAACTTTGAAC
ATGAAGAGACAAAACTCATTTCTTGAAGACAATGGTGCTAACATAATACCGAGAAAAAAA
TTAAAATCAAATCAAAAAACCAAAAAATATGAAAATGAAGATAACTCTCCTGCTCCATCT
TCTTCAGCTGGTAACTTAACCATGGACAGTGAATCGAGGGTCATTGTTTACACAGACGGT
GCATGTTCCAACAATGGAAATTATCGTAAGGAAATAAGGGCTGGGTACGGTGTTTGGTGG
GGCATTGATCACCCACTTAACGTGAGCGCTCGTTTAACCGGGACACCGACAAACCAGCGT
GCTGAAATTGCAGCAGTGAATAAAGCAATACAACAAGCCATAAATAAAGGAATAAAGACA
TTATGTATTAGAACGGATTCCATGTTTATAATTAATTGCGTAACCAAATGGGTGAAAGGT
TGGTTAAAGAAAAATTGGATAAAAGCTGACGGGAAACCTGTCGTACATAAGAAAGAGTTC
CTTATCATGCTAGATGCCTTGAAAAAAGTTGACGTTAAATGGGAACATGTTCGGGGTCAT
GCAGGGGTAACGGGTAACGAAATGGCTGATCAACTTGCGGTATCTGGGGCTAAGAAACCA
TTGCCCTAA

InterProScan

PIRSF
RNase_H1_euk (IPR017067) - T[5-301] 4.5E-78
Gene3D
RNase_H1_N_sf (IPR037056) - T[7-56] 9.0E-20
SUPERFAMILY
Ribosomal_L9/RNase_H1_N (IPR009027) - T[9-53] 5.18E-14
Pfam
RNase_H1_N (IPR011320) - T[10-52] 1.1E-18
Gene3D
RNaseH_sf (IPR036397) - T[148-299] 7.0E-49
ProSiteProfiles
RNaseH_domain (IPR002156) - T[150-298] 25.399
Pfam
RNaseH_domain (IPR002156) - T[153-297] 1.6E-38
SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[153-300] 4.43E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RNH1_HUMAN 39.274 % 190 3.39E-59





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