- Transcript 'KH2012:KH.C5.23.v5.A...' >
- Transcript 'KH2012:KH.L57.5.v1.R...' >
- Transcript 'KH2012:KH.C10.43.v1....' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S3.g01677.01.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
S3 [180,209 / 190,743]
Amino acid sequence
Length: 559
>Harore.CG.MTP2014.S3.g01677.01.p
MYHLNVTPDKQTSPHGCLVVSETDQQRSHVKERVNGTPNQNGGTSTSSKPRSVFENRPPQ
RLTREAMSKYLRERNDQTLIILHAKVAQKSYGNEKRFFCPPPCLYLMESGWKQKQQILEE
ADQAPEAGQVHAFIGIGSSDQEMQQLNLDGKNFCTAKTLYISDTDKRKHFMLCVKMFFGS
GLEVGAFNSRRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGN
FHASSIQWGSFAIHLLDDDESESEEFTVRDGYIHYGQTVKLVCSTTGMALPRLIIRKVDK
QTAILNADDPVSQLHKCAFYLKDSERMYLCLSQERIIQFQATPCPKEPNKEMINDGASWT
IISTDKAEYTFCDGMGPTSKPVTPVPVVHSLQLNGGGDVAMLEVNGENFSPQLKVWFGEV
EADTMYRCEEGLLCVVPDISEFREGWTWVKQSVQVPINLVRHDGIIYPTNLTFAFTPEPG
PRQHCPAALNILHSKRSHHARQSSGERGIDSSDVDDDIDPGTYLPVSKRQALDMNGQLTS
HPGSGVMDPSNSNMLRTVT
Nucleotide sequence
Length: 3,499
>Harore.CG.MTP2014.S3.g01677.01.t
AGAATGGTACAAATTGTGTAAGCAATGGATGTCCTAATAGCGTAACAGAGAACTTCTCCA
TAGAGGAATTCCTACCATAGTTGTATATCACTGACATCACCTTATGTAAAAGCACTTAGA
GGTGTAGGCGACATGTACCATCTCAACGTAACGCCGGATAAGCAGACTTCACCTCATGGC
TGTTTAGTTGTGTCTGAAACCGACCAGCAGAGAAGTCATGTGAAAGAACGTGTGAATGGC
ACACCCAATCAAAATGGTGGAACTAGTACTTCTAGCAAGCCAAGGTCTGTGTTTGAAAAC
AGGCCACCTCAAAGACTAACCAGGGAAGCTATGAGTAAATATCTTCGAGAACGGAACGAT
CAAACACTCATAATATTACATGCTAAGGTTGCTCAAAAATCTTATGGCAACGAGAAGAGG
TTTTTTTGCCCACCTCCATGCTTGTATTTGATGGAAAGTGGATGGAAGCAGAAACAGCAG
ATCCTGGAGGAAGCCGATCAAGCCCCAGAGGCAGGGCAAGTTCACGCTTTCATAGGAATT
GGAAGCAGCGACCAAGAGATGCAGCAACTGAATTTAGATGGGAAGAATTTTTGCACTGCC
AAGACACTCTACATATCAGACACAGATAAAAGAAAGCACTTCATGCTCTGTGTGAAAATG
TTTTTCGGAAGCGGCCTCGAAGTCGGCGCGTTCAATAGCCGCAGAATCAAGGTGATTAGC
AAGCCTTCCAAGAAAAAACAGTCACTCAAAAATGCTGACCTGTGCATTGCTTCCGGAACC
AAAGTTGCGCTCTTCAACCGCCTTCGTTCACAGACTGTCAGCACGAGATACCTGCATGTC
GAAAATGGGAACTTCCATGCGAGTTCTATTCAGTGGGGATCATTTGCGATTCATCTCTTG
GATGACGATGAATCGGAGTCTGAGGAATTTACTGTCCGCGATGGATACATACACTATGGC
CAAACTGTCAAGCTAGTTTGTTCTACCACAGGAATGGCACTACCCAGGCTGATTATAAGA
AAGGTTGACAAGCAGACAGCGATACTCAACGCAGACGACCCTGTATCTCAGTTGCACAAA
TGCGCTTTCTATCTCAAAGACTCGGAACGAATGTATTTGTGTTTATCGCAAGAAAGGATA
ATACAATTTCAGGCCACTCCCTGTCCTAAAGAACCTAATAAAGAAATGATAAATGACGGT
GCCTCTTGGACAATTATTAGTACAGACAAAGCAGAATACACATTTTGTGATGGAATGGGA
CCTACATCAAAGCCCGTCACTCCTGTTCCTGTTGTACATAGTTTACAGCTAAACGGAGGC
GGTGATGTAGCAATGCTTGAAGTGAACGGTGAAAATTTTTCTCCTCAACTGAAAGTCTGG
TTCGGCGAGGTAGAAGCAGACACCATGTACAGATGTGAAGAGGGTTTGCTGTGCGTAGTA
CCGGACATATCAGAATTTCGCGAAGGATGGACTTGGGTCAAGCAGTCTGTTCAGGTTCCC
ATTAACCTTGTAAGGCATGATGGAATTATTTATCCTACAAATCTAACATTCGCCTTCACC
CCTGAACCTGGTCCTCGCCAACACTGCCCGGCTGCTTTAAATATCCTCCACTCCAAGAGA
TCGCATCATGCCAGACAGAGTTCCGGGGAGAGGGGTATTGATTCGTCTGACGTGGACGAC
GACATAGACCCAGGTACTTATTTGCCTGTGAGCAAACGACAAGCGTTAGACATGAATGGA
CAGCTTACTTCACATCCAGGCAGTGGAGTGATGGACCCCAGTAATTCAAATATGTTGAGG
ACGGTTACGTGATGAGCGTTTTCAATCAGTTGTGTATATTGGGTGAAATCGTTCGAGGAT
AATCTCTTCATTATGTATCGTGACCTCCAATTAGCAGAGAAAGTTAAGGAAAGGTGGCGT
TTATTTGGTCATTAAGTCGGTTTGACTAGGTATTACGCCTGTGGATTCCCTTACATCGAA
ATAGTTTAACATGTATGACTGATCAAAATTGAAAAAAACGTACTCATGATCTCTGTATGA
TTGTACCGATTCATATGGCACTTCAGTTGTTCCAAAAGAAAAAGTAAACCAGATTCAACC
TTCAGTTTTCACTGTTGATAGTCACATACTCTTTCCTCACCAGAGAGTAACTTGGAACAA
TTATTCTTGACTGTAAATTCGATTAGTTTCTCTGCATAAGCTCTTCGTATCTGCGGTTTT
ACAACCGATAATAGCACTATTAAGATGTTTGACAGATTCTGTATTTCTACCAGTTGCCAG
TACCATCCACTGTGCCTTAGTAACGCGCAACTGCATTTTCGTATGGCTGCTCTGCGTTTA
CATTTTTCTCTCCTTCATCCAAAACGATATCTTACTCTTTTATACTTTTTTATCGTTCCC
ATTTGAGTGATTTTACAAGACGCTAATAATTGTGTTATTTGGAATTAGCAAAGATTCCTT
CCCTCCCGTGCCATTTTCGTTCACGGTTCCGTTGAATCGCCTTTAATTGCTTTGTTCTTT
ATTAAATTATTTTAAAAATTTTCACCTCCTAATCAAGTTTGCTAGTCTGGTATTTACTTG
ATATTAACTATTAATTATGTAACTATTGTTTGCTGCGTTCGACTTTTTCTATCATTCGAC
TTTTTACAGTTCATTCAAACACATTTAACGTTCACAACCAAATGTGAATGTAAACTGAAA
GTACTCAAAAATGTTTGCAAAAAAAATTAAGCAAACCATGAATTTTATTTATAAGATCAT
CTATATGCACACTTTTGTAGTCTTCCTATGACACCATTATCTGTATGGAATTAACTTTGT
GGTGAGGTCGAGACATGTAGTCAGCTGTTCTCGTGTCGACAGCGGGTTCTCGCATTTAGT
TTTTACAGGTGTAAATGATATTTTCACACTCATTATTATGGGACTTCTTACAGCTCCCTG
CTCTACTTTTGTTACTAGTATCTCACGATCTGGTAACTATTGTTAATTTTGCAATATATT
TCAATAAATGAATAAATTATAGAGTAGAACTTGGATGTAAATGAACAGTTGTAGTTGCAT
TTACTGATAATTCTTGACAACAATTGGGATAGTATATTTGAAATATCGCAGTAGTGAAAT
TATGTGTGTTGAAACTTTTCTACAGTATTTTTGAAACAGAGTTGCTAGGAATCAAAAGTA
CAAGTATGTAATTTTTCGTTCGTTTAGCCAATTTGTAGTATAAAAAGCATTGTTATAGCA
TCAGAACTTTGCAGCGTTTCAGTGAATGGTAAAAGATTGGACATGTTGTTGCTATGAGCA
AGATCTGAGAATTTCGGGCCATGGATTTCTATAAAGGTTTGCAGTAATATCCTTATACAA
TGTTAATCGTAATACAGATAGTTTCATGGTTAGTAGTATGGAAAAGTGGCTTCTTTAGGG
TAAAGACAGCCAACTTCTTTGGCGATGGCCTTGAACCCTAAACTCCGAATCTTCGTGATA
TGAGAGCCTCAATCACATA
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[60-209] 2.98E-60 |
| Gene3D |
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[62-205] 1.3E-165 - T[364-384] 1.3E-165 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[78-209] 1.6E-78 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[79-209] 9.1E-47 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[207-364] 5.62E-65 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[210-359] 2.5E-90 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[210-359] 3.2E-73 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[365-477] 3.15E-37 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[381-477] 6.50162E-67 |
| Gene3D |
Ig-like_fold (IPR013783) - T[386-479] 1.5E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 79.733 % | 763 | 0 |
| RBPJL_HUMAN | 51.288 % | 482 | 1.72E-166 |