Transcript Model
Transcript Id
Harore.CG.MTP2014.S3.g08671.01.t
Possible name(s)
EEF2; EFL1; EFTUD2
Gene model
Location
S3 [87,003 / 92,675]
Amino acid sequence
Length: 964
>Harore.CG.MTP2014.S3.g08671.01.p
MDTDMYDEFGNYIGPELDSDNEPEEDVESIPSPQVDDEDDEKQEEENAVEAIEGGTGMEV
VLHEDKKYYPTLEEVYGEEVETVVHEEDTQPLTEPIIAPIKRKKFALVVQDLPNTTYDME
YLADLLDSPELIRNVVIAGHLHHGKTNFMDCLIEQTHTDIAKKEDKDLRFTDTLLTEQER
GLSIKSQPITLVLPDTRGKNYLLNIMDSPGHVNFSDEVTAAVRLSDGVVLFVDASEGVML
NTEQLLKHAVQEGIAVTVCINKIDRLLLELKLPPTDAYYKLRHTIDEINALLSTYSDQED
VPLISPLLGNVCFASAQFSTCFTLQSFAKIYADHYGGGLDYKAFAQRLWGDSYFNSKTRR
FYKKAPQSNAQRSFVEFILEPLYKIFAQVVGDVDTTLPRVLEEINVHLTKEELKLNIRPL
LRLVCSRFVGDFTGFVDMCVDHIPSAKQGARRKVEHTYTGPLDDSELVQSMLNCDPDGPL
MVHTCKMYSTEDGVSFRVFGRVLSGTVHTNQQVKVLGENYSLEDEEDSRVVVVGRLWISE
ARYTVEVNRVPAGNWVLMEGVDEPIVKTSTITQAQGNEEAHIFRPLKFSTSSVIKIAVEP
VNPSELPKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCVMHDLRKMYAEIDIK
VADPVVAFCETVVETSSLKCFAETPNRKNKLTMIAEPLEKGLAEDIENEVVQIGWNRKRL
GEFFQTKYDWDLLAARSIWAFGPENSGPNILVDDTLPSEVDKALLSSVKDSIVQAIRNVK
FKILDAVIASDPLHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFIEVLAPADCVSAVYT
VLARRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQTFCLSLFHHWQIVP
GDPLDKSIVIRPLEPQPATHLAREFMVKTRRRKGLSEDVSISKFFDDPMLLELARQDVMF
NYPI
Nucleotide sequence
Length: 3,489
>Harore.CG.MTP2014.S3.g08671.01.t
ACGTTGTATCCTCTTGCTAACGTATTAAGCAATCATAGATTTCTAGTAGGTTTGGTTTCG
AGTACTGATCCGTTCAAGTCAGTAATCTGTCGCCATAAACTCTAATCATGGATACTGACA
TGTACGACGAGTTTGGTAATTACATCGGACCAGAATTAGACTCGGACAATGAACCTGAAG
AAGACGTTGAGTCTATTCCGTCGCCTCAGGTAGACGATGAAGATGACGAAAAGCAAGAGG
AGGAGAATGCCGTTGAAGCAATTGAAGGAGGAACTGGAATGGAAGTTGTTCTGCACGAAG
ATAAAAAGTATTATCCTACACTAGAAGAAGTTTATGGTGAAGAAGTGGAGACAGTAGTAC
ATGAAGAAGATACACAGCCACTCACTGAACCGATCATCGCTCCGATAAAACGCAAGAAGT
TTGCCCTCGTTGTGCAAGACCTACCAAACACCACTTATGACATGGAATACCTTGCAGATT
TATTAGATTCTCCTGAACTTATACGAAATGTTGTAATAGCAGGACATTTGCATCATGGAA
AAACAAACTTTATGGATTGCCTCATAGAGCAAACACATACCGACATAGCAAAGAAAGAAG
ACAAAGATTTGCGTTTCACTGATACTTTGTTAACGGAACAAGAGAGGGGACTGAGTATCA
AATCACAGCCTATCACACTGGTGTTGCCAGATACCAGAGGCAAGAATTATCTTTTGAACA
TAATGGATTCTCCAGGGCATGTTAATTTTTCTGATGAGGTTACAGCTGCTGTTAGATTAA
GCGACGGCGTCGTCCTTTTTGTCGATGCATCGGAAGGTGTCATGTTGAACACAGAACAAC
TTCTTAAGCATGCTGTGCAGGAAGGAATTGCTGTAACTGTATGCATAAACAAAATTGATC
GTCTTTTGCTGGAGTTAAAACTACCTCCAACAGATGCCTATTACAAACTTCGTCATACCA
TTGATGAAATAAATGCATTACTAAGTACATACAGTGACCAGGAAGATGTCCCTCTCATAT
CTCCACTTCTCGGGAATGTCTGTTTTGCCAGCGCACAGTTTTCTACCTGCTTCACTTTGC
AATCCTTTGCAAAAATTTACGCTGATCATTATGGCGGTGGACTCGACTACAAGGCGTTTG
CACAAAGGCTCTGGGGAGATTCTTATTTCAATTCCAAAACGAGAAGATTTTATAAGAAGG
CACCACAAAGCAACGCTCAGCGAAGCTTTGTCGAATTCATTCTTGAACCGCTGTACAAAA
TATTTGCTCAGGTTGTTGGTGATGTTGACACCACACTGCCTCGTGTTCTAGAAGAAATAA
ACGTTCATCTGACCAAGGAGGAGCTGAAGTTAAATATTCGTCCTCTCCTGCGTCTAGTTT
GTTCAAGGTTTGTCGGTGATTTTACTGGATTTGTCGACATGTGCGTGGATCACATCCCAT
CAGCAAAACAAGGTGCCCGACGTAAAGTGGAGCATACCTATACTGGTCCGTTGGACGATT
CCGAACTTGTACAGTCAATGTTGAATTGCGATCCAGATGGACCCTTGATGGTTCATACTT
GCAAGATGTACTCGACAGAAGATGGAGTGAGTTTTCGTGTCTTCGGTCGTGTGCTGAGCG
GTACTGTTCACACTAACCAACAAGTAAAAGTGCTGGGGGAGAATTATAGCCTTGAAGATG
AAGAAGATTCCCGTGTAGTTGTAGTCGGCAGATTGTGGATATCAGAAGCTAGGTATACAG
TGGAGGTCAATAGAGTACCTGCAGGCAATTGGGTATTGATGGAGGGAGTTGATGAACCGA
TTGTAAAGACGAGCACAATAACACAAGCGCAGGGAAATGAGGAAGCCCACATATTTCGTC
CTCTGAAATTCAGCACTAGTTCAGTCATCAAAATAGCTGTGGAGCCTGTGAATCCTTCTG
AACTACCTAAGATGTTGGATGGATTGAGAAAAGTCAACAAGAGTTATCCTTTGTTAACAA
CCAAGGTGGAAGAATCCGGTGAACATGTTATCCTCGGAACTGGAGAACTCTATCTGGACT
GTGTCATGCACGACCTTCGCAAAATGTATGCGGAAATAGATATCAAGGTCGCTGATCCCG
TTGTGGCATTCTGTGAAACAGTGGTGGAAACATCCTCGTTGAAATGTTTTGCAGAAACAC
CAAACAGAAAGAACAAACTCACGATGATTGCTGAGCCTTTGGAGAAAGGACTGGCAGAAG
ATATCGAAAATGAAGTCGTGCAGATAGGCTGGAATCGAAAGCGTTTGGGAGAGTTTTTTC
AAACCAAATATGATTGGGATTTACTTGCTGCACGTTCAATTTGGGCATTTGGACCAGAGA
ATTCAGGACCAAACATCTTAGTTGATGACACCCTACCATCCGAAGTGGACAAGGCTTTGT
TAAGCTCTGTCAAGGACAGTATCGTGCAAGCTATCCGCAATGTGAAGTTCAAGATCCTAG
ATGCAGTCATAGCATCTGATCCATTGCACCGAGGTGGAGGTCAGGTCATTCCCACAGCTA
GGCGAGTGGCTTATTCAGCGTTTCTTATGGCCACACCACGTCTTATGGAACCCTACATGT
TCATTGAAGTTCTAGCCCCTGCAGATTGTGTCTCTGCTGTGTACACTGTGCTGGCTCGAA
GAAGGGGTCACGTCACACAGGATGCTCCTGTACCCGGTTCACCATTGTACACTATCAAAG
CATTTTTGCCTGCTATAGATTCATTTGGTTTTGAGACAGATCTTCGAACTCATACACAAG
GGCAGACATTTTGCCTTTCTTTGTTTCACCACTGGCAGATCGTTCCTGGTGACCCACTTG
ACAAAAGCATTGTGATCAGGCCTTTAGAACCTCAGCCAGCCACTCACCTTGCTCGTGAAT
TCATGGTAAAAACAAGGCGTCGCAAGGGACTGAGCGAAGATGTTTCCATCAGCAAATTTT
TCGATGATCCTATGTTGCTCGAGTTGGCGAGACAGGATGTTATGTTTAACTATCCTATTT
AGGTCTCCTAATTCTTTGGATTCGAGGCATTCAAATTTTCTACTATTTTTACCAAAAGCA
GAAAGCTGGTTTGTCCTCCTGTAGGCTAACAGCCTGTCTACTACATGCTTAAACATTTAT
GGTCAAGTACAAGACAAGAAATTTATGATATTTCTTAAATATTACAGTCAAGGACTGCTT
TATCAAATACCCAGTCATATGAACTGGATAACATGGAATAGTGAAAGAATATGCATTTAC
CTCTTTCAATCTGATTATTCCACTATTCCATACATCTGATGGATCTCCCAGCCCTAGAAA
GGAATAAAAAGATTTGGGTAAATGAGTATTGAATGTACTTGTATTATTAACTATATCAAA
TTGGTAGTAAAGTTGCCACTTTCATTTTGAATTTTTAAGCTACTCTGATTGCATTACTGT
TAATAGTGATGAACATCATATCTGCATACTTTAGAAGTTTTTTTATCTAGTTCTTGAGTA
AAGTGCAAG
| Pfam |
EFTUD2_N (IPR031950) - T[3-113] 5.0E-36 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[117-444] 7.4E-83 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[130-414] 44.637 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[132-349] 4.7E-47 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[133-265] 5.5E-13 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[134-147] 2.2E-7 - T[179-187] 2.2E-7 - T[204-214] 2.2E-7 - T[256-265] 2.2E-7 |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[452-573] 4.71E-32 |
| Pfam |
EFTu-like_2 (IPR004161) - T[498-572] 1.2E-11 |
| SUPERFAMILY |
EFG_III/V (IPR035647) - T[590-664] 1.69E-17 - T[821-908] 1.01E-24 |
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[666-820] 4.93E-44 |
| Gene3D |
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[675-816] 1.3E-97 - T[936-938] 1.3E-97 |
| SMART |
Transl_elong_EFG/EF2_IV (IPR005517) - T[709-816] 1.8E-5 |
| Pfam |
Transl_elong_EFG/EF2_IV (IPR005517) - T[713-815] 6.1E-11 |
| SMART |
EFG_V-like (IPR000640) - T[818-907] 3.5E-13 |
| Pfam |
EFG_V-like (IPR000640) - T[818-906] 5.1E-20 |
| CDD |
U5-116kDa_C (IPR035655) - T[821-900] 4.4585E-47 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U5S1_HUMAN | 77.71 % | 1560 | 0 |
| EFL1_HUMAN | 29.484 % | 179 | 6.34E-46 |
| EF2_HUMAN | 37.714 % | 597 | 0 |