Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S400.g05733.01.t

Possible name(s)

HAO1; HAO2

Gene model

Harore.CG.MTP2014.S400.g05733

Location

S400 [7,978 / 10,169]

Sequences

Amino acid sequence

Length: 253

>Harore.CG.MTP2014.S400.g05733.01.p
MWASRSMEEVSSANKKSLLWCNTEFLKNRELHKHYIKRAEKNGFRALVFTVDKVVRAKRR
AVHGVISQYRYGNFAKTSEVFFPGEDVYLSRISQEIHSVSWIYIDWLKSITDLPIVIKGI
ITAEMALEAVEHGVDGIIVSNHGGRQLDGVFAPIDALPEVVKAVNGRCEIYMDGGIRSGN
DVAKAIALGASAVFVGRPLLWGLACEGENGVRKVLEILRDEFVTTMKLLGITTIKELQTT
PNLVVHESIISKI

Nucleotide sequence

Length: 845

>Harore.CG.MTP2014.S400.g05733.01.t
ATGTGGGCGAGTAGAAGTATGGAAGAAGTATCAAGTGCAAATAAAAAATCCTTGCTTTGG
TGTAACACTGAATTTCTGAAGAACAGAGAACTACATAAACATTATATAAAAAGAGCTGAA
AAGAATGGATTCCGAGCATTGGTATTCACCGTAGACAAAGTTGTCAGAGCGAAGCGTCGA
GCTGTTCATGGAGTCATTAGTCAATACAGGTACGGAAATTTTGCCAAAACATCCGAAGTA
TTCTTCCCTGGTGAGGATGTATATCTCAGTCGAATTTCGCAGGAGATTCATTCCGTTAGT
TGGATTTATATCGACTGGTTAAAGTCAATCACCGATTTGCCTATTGTCATAAAAGGAATT
ATTACAGCTGAAATGGCACTGGAAGCTGTTGAACACGGAGTCGATGGTATAATTGTTTCA
AATCACGGCGGAAGACAGTTAGATGGAGTTTTTGCCCCGATTGATGCTTTGCCTGAAGTT
GTTAAAGCCGTCAATGGTCGATGTGAAATTTACATGGACGGTGGTATAAGAAGCGGAAAT
GACGTCGCGAAAGCAATCGCTCTTGGCGCAAGTGCTGTGTTTGTTGGGAGACCATTATTA
TGGGGATTAGCTTGTGAGGGAGAAAATGGAGTACGGAAAGTGCTAGAAATTCTACGAGAC
GAATTTGTGACTACTATGAAATTACTAGGGATAACTACCATTAAAGAGTTGCAGACAACA
CCTAATCTAGTCGTACACGAAAGTATAATATCCAAAATCTAGGAAATAGGCCTCCCGCGA
CCAAGAATTTCATTCAGTGGTGAACTTTAGGTCAAAAGATCGCTGTCCGAAGAGAAATTT
TCAAG

InterProScan

CDD	Alpha-hydoxy_acid_DH_FMN (IPR012133) - T[1-237] 2.56829E-94
Gene3D	Aldolase_TIM (IPR013785) - T[1-249] 1.0E-82
ProSiteProfiles	FMN_HAD (IPR037396) - T[1-247] 62.807
Pfam	FMN-dep_DH (IPR000262) - T[2-239] 3.9E-80
ProSitePatterns	FMN_hydac_DH_AS (IPR008259) - T[140-146] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
HAOX1_HUMAN	46.988 %	220	1.48E-70
HAOX2_HUMAN	47.034 %	211	4.95E-67