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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S400.g13957.01.t

Possible name(s)

PLPP1; PLPP4; PLPP5

Gene model

Harore.CG.MTP2014.S400.g13957

Location

S400 [27,619 / 28,447]

Sequences

Amino acid sequence

Length: 275

>Harore.CG.MTP2014.S400.g13957.01.p
MPSSHIFYLVVETMLRLGLLFLFLISENMTPFQRIIQPEEWWLYKNPVAQHEVINATTLF
CTVLIAPAVTILLVNYFNSKWKKNDVVGAILVATLTLLLNGIIINFIKLMVGRPRPDFFF
RCYPNGKPPKGQPSTYDLQCTGDPYIINEGRKSFPSGHSSLSFASFGFCAIYLAGKLRVF
THGGRGSTLRLLVAMAPLMVATFIVISRTSDYRHHWQDVIAGSILGLSISLVCYRQHYPS
LSDTDCNMPYMKVEPRAIESTRSFSDLQTVNVKQY

Nucleotide sequence

Length: 828

>Harore.CG.MTP2014.S400.g13957.01.t
ATGCCATCCTCACATATATTTTATTTAGTTGTTGAAACAATGTTGCGGCTGGGGTTGCTT
TTCTTGTTTTTGATATCAGAAAATATGACACCCTTTCAAAGAATTATCCAACCAGAAGAA
TGGTGGTTGTACAAAAATCCTGTTGCTCAGCATGAGGTTATTAATGCAACAACACTTTTT
TGTACTGTGCTAATAGCGCCAGCGGTGACAATACTTCTTGTGAATTACTTCAACAGTAAA
TGGAAGAAAAATGATGTCGTCGGTGCCATTCTAGTGGCTACTTTAACTTTGCTACTTAAT
GGAATTATCATTAATTTCATCAAGTTAATGGTTGGACGTCCTAGGCCAGATTTTTTTTTT
CGATGCTATCCAAATGGCAAGCCACCCAAGGGTCAACCCTCAACCTATGATCTTCAATGC
ACTGGAGATCCATATATTATAAATGAAGGAAGAAAGAGCTTCCCCAGTGGCCATTCATCA
CTTTCATTTGCAAGTTTTGGATTTTGCGCAATCTATTTAGCTGGAAAGTTGAGAGTCTTC
ACACATGGTGGTAGAGGCAGCACACTGAGGTTGCTGGTTGCCATGGCTCCTCTTATGGTA
GCAACCTTCATTGTTATCAGTAGGACAAGTGACTACAGACATCACTGGCAGGATGTTATC
GCTGGCTCAATACTTGGACTTTCAATATCGCTTGTGTGCTACCGACAACATTACCCATCG
CTCTCAGATACCGATTGCAATATGCCTTATATGAAAGTGGAACCACGCGCAATAGAGTCT
ACGAGGTCTTTTTCGGACTTGCAAACTGTTAACGTGAAACAATATTAG

InterProScan

SUPERFAMILY
P_Acid_Pase_2/haloperoxi_sf (IPR036938) - T[6-242] 1.96E-34
PANTHER
PPAPDC1B (IPR032462) - T[8-254] 4.8E-93
SMART
P_Acid_Pase_2/haloperoxidase (IPR000326) - T[90-234] 2.0E-26
Pfam
P_Acid_Pase_2/haloperoxidase (IPR000326) - T[91-238] 1.9E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PLPP4_HUMAN 45.935 % 241 9.2E-80
PLPP5_HUMAN 48.536 % 239 7.39E-79