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TRANSCRIPT CARD

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  1. EST 'FF714554.1' > 
  2. Transcript 'KH2012:KH.C3.697.v3....' > 
  3. Transcript 'KH2012:KH.L24.10.v1....' > 
  4. Transcript 'KH2012:KH.C4.686.v1....' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S40.g02010.01.t

Possible name(s)

MRM1; MRM3

Gene model

Harore.CG.MTP2014.S40.g02010

Location

S40 [406,765 / 408,668]

Sequences

Amino acid sequence

Length: 348

>Harore.CG.MTP2014.S40.g02010.01.p
MDCIKFLKVYTYIGYRTYFCNSRLQQQYSICQVRHNSNKKIAVNTKRWEKRKQIDDMLQN
EVLYGRSVCKIALSVSRRSIFRLYLLKMWENFEPDDKRIMDVCKSANDRGIPITFSNRQY
LDHLSLGRPHQGVCLEVGELPYINLDENCINSKDFMTENQPSTKKTLPLWVLLHGILDPM
NLGSILRSSYFLAVNKVIMHGNCAPLTPTVSKASSGASEILPIYRVYEIEHLIEELKRND
WDVIGTVASDDDDDTPHTKDCNDSCLVDLSQISISKPSLVIFGSEGHGIPRYIQDGCTKR
VAIKSDSFFENSTDDAQSLQGLIGSLNVSSAAGIILYELKRQQSLVIK

Nucleotide sequence

Length: 1,047

>Harore.CG.MTP2014.S40.g02010.01.t
ATGGACTGTATTAAATTTTTGAAAGTGTACACTTATATTGGATACAGAACTTATTTCTGT
AATTCAAGATTGCAACAGCAATATTCAATTTGCCAAGTAAGACACAACTCAAACAAGAAG
ATCGCAGTGAATACGAAGAGATGGGAAAAGAGAAAGCAAATAGATGACATGTTACAAAAT
GAGGTACTATATGGAAGGTCTGTTTGCAAAATTGCACTGTCTGTATCTCGTAGATCCATT
TTCAGGTTATATTTACTGAAAATGTGGGAAAACTTCGAACCAGATGATAAAAGAATAATG
GACGTCTGCAAGTCTGCAAATGATAGAGGAATACCTATTACATTTTCAAATAGGCAGTAT
CTTGATCACCTATCATTGGGTCGACCTCATCAGGGTGTATGCTTGGAAGTTGGAGAGTTG
CCATACATTAATCTGGATGAAAATTGCATAAACTCCAAGGATTTTATGACAGAGAATCAA
CCATCGACCAAAAAGACTCTTCCTCTATGGGTTTTACTTCATGGTATTCTTGATCCAATG
AATTTAGGCTCCATCTTGAGATCAAGTTACTTTCTTGCTGTAAATAAGGTCATCATGCAT
GGAAACTGTGCACCACTTACTCCTACTGTCAGTAAAGCTAGTAGCGGGGCCTCCGAAATA
CTTCCGATTTATCGTGTGTATGAAATTGAACACTTGATCGAGGAGTTGAAAAGAAATGAT
TGGGATGTTATAGGAACTGTTGCAAGTGATGATGACGACGATACACCTCATACTAAAGAT
TGTAATGACAGTTGTTTGGTAGATCTTTCACAAATATCTATATCTAAACCATCACTCGTT
ATATTTGGTAGTGAGGGTCATGGTATCCCCAGATATATACAGGATGGTTGTACCAAACGG
GTCGCAATAAAATCTGACAGTTTCTTTGAGAATTCCACAGATGATGCCCAATCGCTTCAA
GGTTTAATAGGAAGCTTGAATGTGTCCAGTGCTGCAGGTATAATTCTCTATGAACTCAAA
AGACAACAATCCTTAGTGATAAAATAA

InterProScan

PANTHER
rRNA_MeTrfase_TrmH (IPR004441) - T[31-342] 6.6E-70
Gene3D
L30e-like (IPR029064) - T[51-138] 9.9E-11
SUPERFAMILY
L30e-like (IPR029064) - T[59-139] 9.89E-13
SMART
SpoU_subst-bd (IPR013123) - T[62-143] 8.4E-10
Pfam
SpoU_subst-bd (IPR013123) - T[63-142] 2.7E-8
Gene3D
tRNA_m1G_MTases_N (IPR029026) - T[152-344] 1.5E-40
SUPERFAMILY
Alpha/beta_knot_MTases (IPR029028) - T[165-344] 1.11E-32
Pfam
SpoU_MeTrfase (IPR001537) - T[169-306] 1.6E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MRM1_HUMAN 31.987 % 134 1.41E-36