Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S40.g05808.01.t

Possible name(s)

DLX1; EN1; EN2

Gene model

Harore.CG.MTP2014.S40.g05808

Location

S40 [98,447 / 101,166]

Sequences

Amino acid sequence

Length: 291

>Harore.CG.MTP2014.S40.g05808.01.p
MTKTGLKDFYIETILELREDGRCCENDTQFKVQSLSDDKEDSFCISHANNCKKQINSACK
DEGQHKQKTFATSSKGSNGDISRCLHKNINESKSKNQEQESKTQNENSPDSSLTEFYRSD
NQKNIFIGREETSSGSPVIKQQSLHLSKLPAWIYCTRYSDRPCSGPRSRKHRRKLVSSAE
ERKPRAVFTATQLRLLKREFEECPYLSEERRETLAADLNLTLSQVKVWFQNKRAKLKKTC
GGTNGLALDLKEQVSYNEINVADCVDFNKIRINLILVFIKLLRKFRRTFDY

Nucleotide sequence

Length: 876

>Harore.CG.MTP2014.S40.g05808.01.t
ATGACAAAAACCGGACTTAAAGATTTCTATATAGAAACCATTTTAGAACTGCGTGAGGAT
GGTCGCTGTTGTGAAAACGACACCCAATTTAAGGTACAATCTCTCAGTGACGATAAAGAG
GACTCCTTTTGTATTTCTCATGCGAACAATTGCAAGAAGCAGATAAACTCTGCATGCAAA
GATGAAGGCCAGCATAAACAGAAAACTTTTGCGACTTCGTCAAAGGGTTCCAATGGAGAT
ATCTCAAGATGTTTGCATAAAAATATAAATGAATCCAAATCAAAAAATCAAGAACAGGAG
AGCAAAACACAGAATGAAAATAGTCCTGATTCTTCTTTAACCGAGTTTTATAGATCAGAT
AATCAAAAAAATATTTTTATCGGCCGGGAGGAGACTAGTTCAGGGTCGCCCGTAATCAAG
CAGCAATCTTTGCATCTGTCAAAACTTCCTGCTTGGATTTATTGCACCCGATATTCAGAC
AGACCTTGTTCAGGTCCACGATCCAGAAAGCATCGCCGAAAGCTTGTCAGCTCTGCAGAG
GAAAGAAAACCTAGGGCTGTTTTCACAGCTACGCAACTTCGACTTCTCAAAAGAGAATTT
GAAGAATGTCCTTACCTCAGTGAAGAACGTAGAGAAACCTTGGCGGCAGATTTAAATTTG
ACACTGTCTCAAGTAAAAGTGTGGTTCCAGAACAAAAGAGCGAAGTTGAAGAAAACATGC
GGAGGGACCAATGGATTAGCACTTGATCTTAAGGAACAAGTCAGCTATAATGAAATTAAT
GTTGCAGACTGCGTTGACTTCAACAAGATAAGAATAAACTTGATTTTAGTTTTTATAAAA
CTTCTGAGGAAATTTCGACGCACTTTCGACTACTGA

InterProScan

SUPERFAMILY	Homeobox-like_sf (IPR009057) - T[179-239] 5.56E-22
ProSiteProfiles	Homeobox_dom (IPR001356) - T[179-239] 20.585
SMART	Homeobox_dom (IPR001356) - T[181-243] 5.1E-25
CDD	Homeobox_dom (IPR001356) - T[182-239] 1.59486E-20
Pfam	Homeobox_dom (IPR001356) - T[182-238] 2.2E-21
ProSitePatterns	Homeobox_CS (IPR017970) - T[214-237] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
HME2_HUMAN	55.752 %	126	3.98E-34
HME1_HUMAN	49.306 %	134	8.01E-37