- Transcript 'Haaura.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C8.183.v1....' >
- Clone 'cign036k10' >
- Clone 'ma301e19' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S413.g14930.01.t
Possible name(s)
DMRT1; DMRTA1; DMRTA2
Gene model
Location
S413 [10,871 / 13,932]
Amino acid sequence
Length: 501
>Harore.CG.MTP2014.S413.g14930.01.p
MDAILNSGEGFVQNPAAAAMLLQNANTKANRAPKCARCRNHGVVSALKGHKRFCRWKDCM
CDKCMLIAERQRVMAAQVALRRQQAQEHNKTREIDLLLRSNNGYLTSPTETKRPRMDPNV
TMAPAPIAMTSQATKVTSLLPFAAMYQQQQMAYNNIMMKQSHYIMRNHCDQGPRNNSISS
SGCSSLSPGNSEPQLSPISPKIIGGIRRTSSPAESSPKLRSAGSKGGSYLDDSAEKSSKS
TSSNDVISPPQDADEHSRDLRVLLRTFPHLSRDQLSAILRSCNYDVIRAIEHVLNKRECR
KRSRNYAGIDDNGSVSSEKRMVTSNNDVTKNTVASFLPNISPIASNSVPMGTHYSLPPQV
MRNAGLMPSPFTHQRFPHIPFPAGIYPHFTRQLQPGLAPQDPSVSQMPYYPHFRSQFGNQ
KDLGSIPGPFPQLAFSPFPNFPPIATRSANNNPFLSNFSRDVTTRQKIIEPGTSKESSPN
YSIISEADNLNHELNQDSKTE
Nucleotide sequence
Length: 1,506
>Harore.CG.MTP2014.S413.g14930.01.t
ATGGACGCTATTCTGAATTCTGGTGAAGGCTTCGTTCAAAATCCCGCTGCTGCCGCCATG
CTGCTCCAGAACGCGAATACTAAAGCTAACAGAGCTCCGAAATGCGCAAGATGCCGTAAC
CACGGAGTCGTGAGCGCGCTGAAAGGACACAAAAGGTTTTGCAGATGGAAAGATTGCATG
TGTGACAAATGTATGCTGATCGCAGAGAGGCAAAGAGTTATGGCTGCCCAGGTCGCACTC
CGTCGTCAGCAAGCGCAAGAACACAACAAAACGCGGGAAATCGATTTGCTTTTGAGATCA
AACAACGGCTATCTCACTTCTCCCACCGAAACAAAAAGACCCAGAATGGATCCTAACGTA
ACAATGGCCCCTGCTCCTATCGCTATGACATCACAGGCAACTAAAGTGACGTCACTTCTC
CCGTTTGCGGCAATGTATCAACAGCAGCAAATGGCGTACAATAACATTATGATGAAACAA
TCGCATTACATTATGAGAAACCATTGTGACCAAGGACCTCGTAACAATAGCATAAGCAGT
TCTGGTTGCTCTTCACTATCGCCTGGCAATAGTGAACCGCAATTGAGTCCAATATCTCCA
AAGATAATTGGCGGCATCAGACGGACTTCCAGTCCAGCTGAATCGAGTCCGAAGCTTCGA
TCTGCTGGATCCAAGGGTGGATCCTACTTGGACGATTCCGCCGAGAAATCTAGCAAATCT
ACGTCATCTAATGACGTCATCTCACCACCACAAGATGCAGATGAACATAGTCGTGACCTC
CGTGTTTTACTTCGCACCTTCCCACATTTATCTCGCGACCAACTTTCGGCCATTTTGAGA
AGTTGCAATTATGACGTAATACGAGCTATCGAACATGTGCTGAACAAACGGGAATGCCGC
AAGAGGTCGCGAAACTACGCCGGAATAGACGACAATGGTTCCGTGTCAAGTGAAAAGAGA
ATGGTGACGTCGAATAATGACGTCACTAAGAACACCGTTGCCTCGTTCCTCCCCAATATC
AGTCCGATTGCAAGCAATTCCGTTCCGATGGGAACGCATTACTCTCTACCCCCACAAGTG
ATGAGGAATGCGGGATTGATGCCGTCACCTTTCACGCATCAGAGATTTCCGCATATTCCA
TTTCCAGCAGGGATCTATCCTCATTTCACGAGGCAGTTACAACCAGGTCTCGCACCACAA
GACCCATCGGTGTCACAAATGCCATACTACCCACACTTCAGGAGTCAGTTCGGTAATCAA
AAGGACCTAGGTTCGATTCCCGGTCCCTTCCCTCAACTCGCTTTCAGTCCCTTTCCTAAC
TTCCCACCGATCGCCACCAGAAGCGCCAACAACAATCCATTTCTATCAAACTTTTCACGA
GACGTCACAACACGGCAGAAAATAATTGAACCCGGGACCTCGAAAGAATCCAGTCCTAAC
TACTCAATCATATCGGAAGCCGATAATTTAAATCACGAACTAAATCAAGATTCAAAAACT
GAATGA
| PANTHER |
DMRT/dsx/mab-3 (IPR026607) - T[19-355] 1.4E-63 |
| Gene3D |
DM_DNA-bd_sf (IPR036407) - T[27-77] 3.2E-23 |
| SUPERFAMILY |
DM_DNA-bd_sf (IPR036407) - T[29-77] 1.31E-17 |
| Pfam |
DM_DNA-bd (IPR001275) - T[31-77] 2.3E-22 |
| SMART |
DM_DNA-bd (IPR001275) - T[31-84] 7.8E-27 |
| ProSitePatterns |
DM_DNA-bd (IPR001275) - T[35-64] . |
| ProSiteProfiles |
DM_DNA-bd (IPR001275) - T[35-82] 14.218 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[249-296] 2.17E-5 |
| ProSiteProfiles |
CUE (IPR003892) - T[255-298] 10.785 |
| Pfam |
DMA (IPR005173) - T[260-293] 3.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMTA2_HUMAN | 75.949 % | 137 | 5.35E-35 |
| DMRTA_HUMAN | 32.828 % | 150 | 5.15E-40 |
| DMRT1_HUMAN | 60.87 % | 114 | 6.93E-28 |