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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S414.g03280.01.t

Possible name(s)

Harore.CG.MTP2014.S414.g03280

Gene model

Harore.CG.MTP2014.S414.g03280

Location

S414 [81,341 / 85,141]

Sequences

Amino acid sequence

Length: 169

>Harore.CG.MTP2014.S414.g03280.01.p
VIPAGNHTLQLSKTVKVSLYSKVTNPYLVIFDSTTKFAVPAGYLKLRKCRIITSQNEDDD
DNTTFRIVANMSDDEITLQASNKTIRDEWVRCLSPLTQEQSLVSKHQSSSFLPILEEAEE
PNEQQELQSESLKAPSRRQRIREGRRSSLPRSGALFQRRSQIVMFCPKA

Nucleotide sequence

Length: 510

>Harore.CG.MTP2014.S414.g03280.01.t
GTCATCCCGGCTGGCAATCATACTCTACAATTATCGAAGACAGTCAAAGTGAGCTTGTAC
AGTAAAGTGACGAATCCGTATCTCGTCATATTTGATTCAACAACAAAATTTGCAGTACCA
GCAGGATATTTAAAACTTCGTAAATGTCGGATTATTACATCACAAAATGAGGATGATGAC
GACAACACAACTTTCCGCATAGTCGCGAATATGTCCGATGATGAGATTACCCTCCAAGCA
TCAAATAAAACTATTCGTGATGAATGGGTTCGTTGTCTTTCTCCACTCACACAAGAACAA
AGTTTGGTTTCAAAGCATCAAAGTTCAAGTTTTTTACCAATACTTGAAGAAGCAGAAGAG
CCAAATGAACAACAAGAATTACAATCAGAATCATTAAAAGCTCCGTCAAGAAGACAAAGA
ATACGAGAAGGTCGAAGATCTAGTTTACCCAGAAGTGGAGCATTATTCCAACGTAGATCG
CAAATTGTAATGTTTTGCCCGAAAGCTTAA

InterProScan

ProSiteProfiles
PH_domain (IPR001849) - T[1-98] 8.08
Gene3D
PH-like_dom_sf (IPR011993) - T[8-101] 3.3E-7
Pfam
PH_domain (IPR001849) - T[23-94] 3.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value