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- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S414.g10470.01.t
Possible name(s)
ZNF300; ZNF570; ZNF84
Gene model
Location
S414 [43,563 / 45,465]
Amino acid sequence
Length: 491
>Harore.CG.MTP2014.S414.g10470.01.p
MHVTGSKLLYCNFATRDSQVNAAYYYCYYLTREIVLESKMKKFFCRICHTPFSDCLHYMR
HVKMHRIGKNFRRSIAGKKTSKCLHARLGYTLRSYLLKKPFKCGICDRVVSERVGRINNS
TVVSLRKNVSLKKTKKRSRVCVNEGVKSSKLPGNVDKDIEQTVIQNVDGFPTQKTLTTIV
TIVSPLKNDKSDDVDIKPLTTVTTFPNVSKNIKMYKCSLCDKSFPHKSSVKTHMLIHSGE
KPFRCAECEKTFKTKNQMNIHMRVHTKERPYSCEICDREFTQLGQVKRHLATHTGDKPFV
CEVCEKRFARKFYLTKHMRTHTKEKPFKCMVCDRAFSQSIHLKTHMKVHTGERPFECEIC
KKLFARKGDLTTHLRIHTKEKPHACTDCGKAFTDRSTLIKHFRLHSGENGAGLKTCKCEV
CHKPFSTLGALKTHMVLHTGERPFLCEACGKKFPRKGDLRSHIKVHKNYIGKIVEIPADQ
EPFYVEIEISE
Nucleotide sequence
Length: 1,476
>Harore.CG.MTP2014.S414.g10470.01.t
ATGCATGTAACGGGGTCGAAGTTACTTTATTGCAATTTTGCAACACGAGACAGTCAAGTT
AATGCTGCATATTATTATTGTTATTATTTAACTCGTGAAATCGTTTTGGAAAGCAAAATG
AAGAAGTTCTTTTGCCGTATTTGCCATACACCGTTTTCCGACTGTTTACATTACATGAGA
CATGTTAAAATGCATAGAATAGGGAAAAACTTTCGACGGTCTATCGCAGGCAAGAAGACT
TCGAAATGCTTGCACGCTCGCCTTGGCTATACGTTACGATCTTATTTGCTTAAAAAACCT
TTCAAATGCGGAATTTGCGATCGAGTAGTTTCCGAAAGAGTCGGTCGTATCAACAATTCG
ACAGTTGTCAGTTTAAGGAAGAATGTGAGTTTGAAAAAGACAAAGAAAAGATCCCGAGTT
TGTGTGAATGAAGGAGTAAAATCTTCAAAATTACCTGGTAATGTGGACAAGGATATCGAA
CAAACAGTTATCCAGAATGTAGATGGTTTTCCTACACAAAAAACATTAACAACGATTGTA
ACTATCGTGAGTCCTCTCAAAAATGACAAATCAGATGACGTTGATATTAAGCCTCTTACT
ACGGTTACTACATTTCCCAATGTGTCAAAAAATATAAAAATGTATAAATGTTCCTTGTGT
GACAAAAGTTTTCCCCATAAGTCGAGCGTCAAGACACACATGCTGATCCACTCTGGAGAG
AAACCTTTCCGATGCGCGGAATGCGAAAAAACATTTAAGACGAAGAATCAAATGAATATC
CACATGAGGGTCCACACGAAAGAACGTCCTTATTCGTGTGAAATTTGCGACAGGGAGTTT
ACTCAGCTCGGACAGGTGAAGCGTCATCTCGCTACTCACACGGGCGATAAACCATTTGTT
TGCGAAGTTTGCGAAAAGAGATTTGCGAGAAAGTTCTACCTCACAAAACATATGCGAACA
CACACGAAGGAGAAACCTTTCAAATGCATGGTGTGTGATCGAGCATTCTCCCAGAGCATC
CATCTGAAGACGCACATGAAAGTTCACACTGGAGAACGTCCGTTCGAGTGTGAAATTTGT
AAAAAATTATTTGCGAGGAAGGGTGATTTAACAACGCATTTACGAATCCATACTAAAGAG
AAACCTCATGCTTGCACGGATTGTGGAAAAGCGTTCACTGACAGGAGTACTTTAATCAAA
CATTTTCGTCTTCACTCGGGGGAGAACGGCGCCGGTCTGAAAACTTGCAAATGCGAAGTT
TGTCACAAGCCGTTCTCGACCCTCGGGGCTCTTAAAACCCACATGGTGCTTCATACGGGT
GAAAGACCGTTCCTGTGCGAGGCATGCGGTAAAAAGTTTCCACGTAAAGGAGATCTGAGG
AGTCACATCAAAGTCCATAAGAATTATATTGGAAAGATTGTAGAAATTCCTGCTGATCAA
GAGCCGTTCTACGTGGAAATTGAAATATCAGAATAA
| SMART |
Znf_C2H2_type (IPR013087) - T[43-65] 9.4 - T[215-237] 1.5E-4 - T[243-265] 9.5E-5 - T[271-293] 0.0013 - T[299-321] 2.7E-4 - T[327-349] 6.2E-4 - T[355-377] 7.0E-4 - T[383-405] 0.0021 - T[416-438] 0.019 - T[444-466] 6.2E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[45-65] . - T[217-237] . - T[245-265] . - T[273-293] . - T[301-321] . - T[329-349] . - T[357-377] . - T[385-405] . - T[416-438] . - T[446-466] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[213-265] 3.58E-17 - T[251-308] 3.62E-19 - T[308-364] 6.1E-21 - T[349-401] 1.7E-18 - T[414-466] 2.03E-15 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[215-242] 15.667 - T[243-270] 15.48 - T[271-298] 14.42 - T[299-326] 15.438 - T[327-354] 16.311 - T[355-382] 15.521 - T[383-410] 14.877 - T[416-443] 13.38 - T[444-466] 12.05 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN300_HUMAN | 47.638 % | 245 | 2.56E-74 |
| ZNF84_HUMAN | 34.419 % | 245 | 2.57E-73 |
| ZN570_HUMAN | 44.231 % | 247 | 7.93E-76 |