- Transcript 'Harore.CG.MTP2014.S1...' >
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Transcript Model
Transcript Id
Harore.CG.MTP2014.S414.g14334.01.t
Possible name(s)
ZNF468; ZNF480; ZNF816
Gene model
Location
S414 [5,516 / 6,293]
Amino acid sequence
Length: 258
>Harore.CG.MTP2014.S414.g14334.01.p
MSSRYTIKTEITLDDQCNCETCGKTFSHPRHLSKHRQTHTNEKPFGCEVCEKTFTLRRYY
IVHMKTHTTEKDYKCNICDKTFTLKRYCTEHMRTHVQKKRYTCQVCEKTFVTGRNCRKHM
KSHILQGQYHCEFCDRIFTRPGYLERHTRTHTNKKVFQCQVCEKSFSYKTHCVAHMRIHT
EDKPYKCEMCEKMFTQKGNCVEHMRIHTRERPFKCDVCGKAFAKKCNFSRHKIALHRRGD
SDSCKSNCSNSKFEKETG
Nucleotide sequence
Length: 777
>Harore.CG.MTP2014.S414.g14334.01.t
ATGTCATCTCGTTACACAATCAAGACCGAGATCACATTGGACGACCAATGTAATTGTGAA
ACTTGCGGAAAAACTTTCTCACATCCAAGACATCTATCTAAACACAGGCAAACTCATACG
AATGAAAAACCATTCGGGTGCGAAGTGTGCGAAAAAACATTCACCCTGCGAAGATATTAC
ATCGTTCACATGAAAACTCATACAACCGAGAAAGATTACAAGTGCAACATATGTGATAAA
ACGTTCACCCTGAAAAGATATTGTACTGAACATATGCGAACTCACGTGCAGAAAAAGAGA
TACACGTGTCAGGTGTGTGAAAAAACTTTTGTGACAGGAAGAAACTGCCGAAAACATATG
AAAAGTCACATTCTGCAGGGTCAGTATCACTGTGAATTCTGCGATAGAATTTTCACTCGT
CCTGGGTACCTCGAACGTCACACGAGAACCCACACAAACAAAAAAGTGTTCCAATGTCAA
GTATGTGAGAAATCGTTTTCATATAAGACTCACTGCGTCGCTCACATGCGGATTCACACG
GAAGATAAACCATACAAATGTGAAATGTGTGAAAAAATGTTTACGCAGAAAGGAAATTGC
GTGGAACACATGAGGATTCACACGAGAGAACGACCATTCAAATGTGACGTTTGCGGTAAA
GCGTTTGCTAAAAAATGTAATTTCTCGCGACATAAAATTGCACTGCATCGGAGAGGTGAT
TCAGACAGTTGCAAAAGTAATTGTTCAAATTCAAAATTTGAAAAGGAAACTGGATAA
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[17-39] . - T[47-67] . - T[75-95] . - T[103-123] . - T[131-151] . - T[159-179] . - T[187-207] . - T[215-236] . |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[17-44] 15.085 - T[45-72] 12.321 - T[73-100] 12.092 - T[101-128] 10.034 - T[129-156] 13.173 - T[157-184] 14.482 - T[185-212] 15.043 - T[213-241] 11.24 |
| SMART |
Znf_C2H2_type (IPR013087) - T[17-39] 0.45 - T[45-67] 0.02 - T[73-95] 0.0017 - T[101-123] 0.0053 - T[129-151] 7.3E-4 - T[157-179] 0.018 - T[185-207] 5.3E-4 - T[213-236] 0.018 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[26-82] 3.72E-18 - T[67-119] 1.85E-13 - T[138-194] 1.14E-18 - T[179-231] 7.84E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN816_HUMAN | 41.589 % | 183 | 7.94E-54 |
| ZN888_HUMAN | 42.661 % | 189 | 1.22E-55 |
| ZN468_HUMAN | 42.922 % | 185 | 2.88E-55 |