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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S419.g16040.01.t

Possible name(s)

BRIX1; IMP4; RPF2

Location

S419 [19,671 / 21,763]

Sequences

Amino acid sequence

Length: 313

>Harore.CG.MTP2014.S419.g16040.01.p
MEAQKSNNESKKRKQRRIRQKNSKKRKLSQPALKPEEVEAKEREKIPNELSEMQPLVEKG
KWKNKQRVLAFTSRGVSFKARHFIKDLQSLMPHTKTDVKMDRKGQLLIVNEICELKNCNK
CIFLVGKKKKDLYMWLSNVPHGPSALFCIEYLNMMKELKFTGNCLKGSRPVLCFDKSFDE
EPHYRLLKELFIQIFGTPRYHPKSQPFVDHVLSLSILDGRIWFRNYQIVAENGELVEIGP
RFTMILARILSGSFGGPVLYINPDYVSPNMIRRMVKLRSSGKYVDRQSAIKSRRSRKLDK
TYATDDTDLVFQQ

Nucleotide sequence

Length: 942

>Harore.CG.MTP2014.S419.g16040.01.t
ATGGAAGCTCAGAAATCGAATAACGAGTCCAAGAAACGAAAACAGAGGCGCATAAGGCAG
AAAAATTCGAAGAAACGTAAATTATCGCAACCTGCTTTAAAACCGGAAGAGGTAGAAGCC
AAAGAAAGAGAAAAAATTCCTAATGAATTGTCTGAAATGCAACCCCTTGTTGAAAAAGGA
AAATGGAAAAACAAGCAGAGAGTACTGGCTTTTACTTCAAGAGGAGTGAGTTTCAAAGCC
AGACATTTTATAAAAGATCTTCAAAGCCTCATGCCACACACGAAAACAGATGTTAAAATG
GATCGAAAAGGACAGTTACTCATTGTTAATGAAATTTGTGAACTGAAGAACTGCAACAAA
TGTATTTTTCTTGTCGGTAAAAAGAAGAAAGATTTGTATATGTGGCTGTCAAATGTCCCT
CATGGACCTTCTGCTCTCTTTTGTATTGAATACTTGAATATGATGAAGGAATTAAAATTC
ACTGGAAATTGCTTGAAGGGATCACGGCCTGTTCTATGTTTTGATAAGAGTTTCGATGAA
GAACCTCACTATCGCTTACTAAAAGAACTCTTCATCCAAATTTTTGGAACACCTCGCTAC
CACCCGAAAAGTCAGCCATTTGTAGATCATGTGTTGTCCTTAAGCATTCTCGATGGTCGT
ATTTGGTTTAGAAATTATCAAATAGTCGCTGAAAACGGAGAGCTTGTTGAAATTGGACCA
CGATTTACAATGATACTGGCCAGAATACTCTCGGGTAGTTTTGGAGGACCAGTGCTGTAT
ATCAATCCGGATTATGTGTCGCCTAACATGATAAGACGAATGGTGAAATTAAGATCTTCT
GGGAAATATGTAGATCGCCAGAGTGCAATCAAATCACGGAGGTCTAGGAAACTCGACAAA
ACTTATGCTACAGATGATACCGACTTAGTTTTTCAACAGTGA

InterProScan

PANTHER
BRX1 (IPR026532) - T[11-312] 3.1E-118
ProSiteProfiles
Brix (IPR007109) - T[66-255] 31.448
SMART
Brix (IPR007109) - T[69-249] 3.6E-49
Pfam
Brix (IPR007109) - T[73-247] 1.2E-34

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BRX1_HUMAN 60 % 344 1.68E-118