Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S41.g05014.01.t

Possible name(s)

EEF2; EFL1; EFTUD2

Location

S41 [92,697 / 98,781]

Sequences

Amino acid sequence

Length: 846

>Harore.CG.MTP2014.S41.g05014.01.p
MVNFTVDQIREIMDKKANIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR
KDEQERCITIKSTAISLYYTLPEKDLDWIKQEKMGTGFLINLIDSPGHVDFSSEVTAALR
VTDGALVVVDCVSGVCVQTETVLRQAIAERIKPIVFMNKMDRALLELQNEKEDLYQTFAR
IVENVNVIISTYGGGEDNKDSALGDISVYPNKGTVGFGSGLHGWAFSLKQFAEMYAVKFK
VETKKLMEKLWGDNFFNAKTKKWSKTKAEGNERAFNLYILGPIFLVFEQIMTKRYNVTQL
APLMEKTGVVIKGDDKDKIEKPLLKHFMRTWLPAGDTLLQMITIHLPSPVTAQKYRCEML
YEGPQDDLAANAIRTCDPDGPLVMYISKMVPTSDKGRFYAFGRVFAGTVATGQKVRIMGP
QYVPGKKADLYKKQIQRTILMMGRYTEPIDDVPCGNIVGLVGVDQYLVKTGTITTFENAH
NLRVMRFSVSPVVRVAVEALNPQDLPKLVEGLKRLAKSDPMVQCMIEESGEHVVAGAGEL
HLEICLKDLEEDHACIPLKKSDPVVSYRETVKEASSITCLSKSPNKHNRLYMKARPFADG
LCEAIDNGDIVPRQEIKARARILHEEYEFDINEARKIWCFGPDTTGPNFLMDCTKGVQYL
NEIKDSVVAGFQWASKEGVLCEEHMRGICINVLDVTLHADAIHRGGGQIIPTARKCIYAS
QLTAAPSLFEPVYLVEIQCPENAVGGIYGVLNRRRGVVFEENKVPNMPMFCVKAHLPVNE
SFGFTADLRSGTGGQAFPQCVFDHWQIVPGDALDPTSKPGLIVAQTRKRKGLTEGVPPLD
RYYDKL

Nucleotide sequence

Length: 2,936

>Harore.CG.MTP2014.S41.g05014.01.t
CGTGGATGAGTGACGTAGCTCTCTTGTCTCGCTTTATACTATCGCTCAGTCCTTTTTAAA
CCCTTCCTACTGTAGAAGGGTCAGTTAAATTGATTATCGTCGCTAAAAACCTAGCAGCAT
ATCAAAATGGTGAATTTCACTGTCGACCAGATCCGTGAGATCATGGACAAAAAGGCGAAC
ATTCGTAATATGTCCGTCATTGCCCATGTCGATCATGGTAAGTCCACCTTGACGGACTCC
CTGGTCAGCAAGGCAGGCATCATCGCGGGCTCAAAGGCTGGGGAGACTCGTTTTACCGAT
ACGAGAAAGGACGAACAAGAGAGATGTATTACTATTAAGTCCACTGCTATCTCCCTGTAT
TACACACTGCCTGAAAAAGACCTCGATTGGATCAAGCAAGAAAAGATGGGCACCGGTTTC
CTCATCAACTTGATCGATTCGCCTGGGCATGTCGACTTCTCTTCTGAGGTCACCGCCGCT
CTGCGTGTTACTGATGGAGCTTTGGTTGTCGTGGATTGTGTCAGCGGTGTTTGCGTGCAA
ACGGAAACCGTACTTCGTCAGGCCATCGCAGAGCGTATCAAGCCGATTGTTTTCATGAAC
AAGATGGACCGAGCACTTCTCGAATTGCAAAACGAAAAGGAAGATTTGTACCAGACATTT
GCTCGTATTGTCGAGAATGTCAATGTCATTATTTCAACGTATGGAGGTGGTGAGGACAAC
AAAGACTCTGCACTGGGAGATATCTCTGTCTACCCCAATAAAGGAACTGTCGGCTTTGGT
TCTGGCTTGCATGGTTGGGCATTTTCTCTGAAACAATTTGCTGAAATGTATGCAGTCAAA
TTCAAAGTTGAAACAAAAAAACTGATGGAAAAACTATGGGGAGACAACTTCTTCAATGCC
AAGACAAAGAAATGGAGTAAAACAAAAGCAGAAGGCAACGAGAGAGCATTCAACTTATAT
ATTCTGGGACCGATCTTTTTGGTCTTTGAACAAATCATGACTAAGAGATATAATGTCACC
CAATTGGCTCCTTTGATGGAGAAAACTGGCGTCGTTATCAAGGGTGACGATAAAGATAAG
ATTGAAAAGCCGCTTCTGAAGCATTTTATGAGAACATGGTTGCCAGCTGGCGATACTTTG
CTTCAAATGATCACGATCCATCTTCCGTCTCCAGTCACCGCTCAGAAATATCGCTGTGAA
ATGTTATATGAGGGACCACAAGATGACCTAGCTGCTAATGCAATCAGAACTTGCGATCCA
GATGGACCTCTTGTCATGTACATCAGCAAGATGGTACCAACGTCGGACAAGGGCCGTTTC
TACGCCTTTGGCCGCGTCTTTGCGGGAACAGTGGCGACCGGTCAAAAGGTCAGAATCATG
GGACCGCAATACGTTCCTGGAAAGAAGGCAGATTTATACAAGAAGCAGATTCAGAGAACG
ATCCTCATGATGGGTCGTTACACTGAACCAATTGATGACGTTCCATGCGGTAATATCGTT
GGGCTTGTCGGCGTTGATCAATATCTCGTGAAAACTGGAACAATTACGACGTTTGAAAAT
GCTCACAACTTGCGTGTGATGAGATTCAGTGTATCTCCTGTTGTACGTGTGGCTGTCGAG
GCATTGAATCCTCAGGACCTTCCCAAGCTTGTTGAAGGATTAAAGAGACTCGCAAAATCC
GATCCCATGGTACAATGCATGATCGAAGAAAGTGGCGAGCACGTTGTCGCGGGAGCGGGA
GAACTCCATCTTGAGATTTGCCTGAAGGATTTGGAAGAGGATCACGCTTGCATCCCACTG
AAGAAATCTGATCCGGTAGTATCTTATCGAGAAACCGTCAAAGAGGCCTCATCCATAACC
TGCTTATCAAAATCGCCCAACAAGCACAATCGTTTGTACATGAAAGCGAGACCGTTCGCG
GACGGATTGTGTGAAGCAATTGATAATGGTGACATCGTGCCACGGCAAGAAATCAAAGCA
CGTGCACGCATTCTCCACGAGGAATACGAATTCGATATTAATGAGGCGAGAAAAATCTGG
TGCTTCGGTCCAGACACGACTGGTCCAAACTTCTTGATGGACTGCACCAAGGGAGTACAG
TACCTGAACGAAATCAAGGATTCTGTTGTTGCTGGATTTCAGTGGGCGTCGAAGGAAGGT
GTGCTGTGTGAGGAGCACATGAGAGGAATATGCATTAACGTCCTCGACGTCACGTTGCAC
GCTGACGCCATCCATCGCGGCGGTGGTCAGATCATTCCCACTGCGAGGAAATGCATATAT
GCTTCTCAGCTTACAGCTGCACCGTCACTGTTTGAACCCGTATATCTTGTCGAGATCCAG
TGCCCTGAAAATGCTGTTGGCGGAATCTACGGCGTTCTTAATCGTCGACGTGGAGTAGTC
TTCGAAGAAAATAAGGTTCCTAACATGCCGATGTTCTGTGTCAAAGCTCACTTACCTGTC
AACGAATCATTTGGATTTACTGCCGATCTACGATCGGGCACCGGAGGTCAAGCATTCCCT
CAATGTGTTTTTGACCATTGGCAAATCGTACCCGGTGACGCGTTGGATCCCACCTCTAAA
CCGGGACTGATCGTTGCTCAAACAAGAAAGAGGAAAGGTCTGACTGAAGGTGTTCCACCG
CTTGATCGGTACTATGACAAGCTCTAGTCGTTGGAATAATGTCACCAGTGTTGTAAGATA
GAAATAATATATACTACAGCTTGCGATTGGCTCGCCCTGCATCATTCAATAATAATAATA
ATAATTTCATCATTCGAACTGTACAACGAAAGCTGAGACTGGGTGTGTTTGCGTGTGTAA
ACTAGTGTGAAGTTTTTGTTAGGAGTCTTATCTGTTCAATACCAGCCATGTAAATGACCT
GCATCGACGATTGTGGAGAGTTAACGTAATAAACAGCCAACTTGGTGTCATTGCAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[4-347] 2.19E-101
ProSiteProfiles
TF_GTP-bd_dom (IPR000795) - T[17-350] 55.661
Pfam
TF_GTP-bd_dom (IPR000795) - T[18-347] 4.3E-66
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[19-169] 1.1E-18
PRINTS
TF_GTP-bd_dom (IPR000795) - T[21-34] 1.4E-13 - T[65-73] 1.4E-13 - T[101-111] 1.4E-13 - T[117-128] 1.4E-13 - T[153-162] 1.4E-13
ProSitePatterns
G_TR_CS (IPR031157) - T[58-73] .
SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[348-485] 7.73E-45
Pfam
EFTu-like_2 (IPR004161) - T[398-473] 3.7E-14
SUPERFAMILY
EFG_III/V (IPR035647) - T[488-563] 2.01E-19 - T[730-843] 7.19E-32
SUPERFAMILY
Ribosomal_S5_D2-typ_fold (IPR020568) - T[565-728] 6.57E-66
Gene3D
Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[574-725] 2.7E-121 - T[833-834] 2.7E-121
SMART
Transl_elong_EFG/EF2_IV (IPR005517) - T[610-725] 1.5E-25
Pfam
Transl_elong_EFG/EF2_IV (IPR005517) - T[614-724] 3.5E-30
SMART
EFG_V-like (IPR000640) - T[727-816] 1.5E-19
Pfam
EFG_V-like (IPR000640) - T[728-813] 1.4E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
U5S1_HUMAN 37.428 % 597 0
EFL1_HUMAN 34.163 % 241 1.29E-66
EF2_HUMAN 76.13 % 1327 0