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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S425.g06453.01.t

Possible name(s)

TPM1; TPM2; TPM4

Location

S425 [18,940 / 21,799]

Sequences

Amino acid sequence

Length: 326

>Harore.CG.MTP2014.S425.g06453.01.p
MEMATEELKTVSIFGFDIHIIFSISTAKHICLINQSISKMEAIKKKMQMLKMDKENSIDR
KEQAEVDRKNVEEKVGGLEEELHTLEKRLKGTEDELSTHQEKLGQSNDSLEAAEKKASDA
EQEVSDLNKKISGLEDELESAQEKLAISLTKLEDAEKAADESERGRKVIENRSLKDQEKL
QLQEVHLQEAKDIAEDADRKYEEVARKLATVEGDLERGEERAELAESKSTELEEEMKNAA
NNLKSLEAAAEKYATKEAIFADEVKTLSDRLKDSEDRAESAEKLVVELEKSIDDIEAYLI
LYFLSLDEVYKQKMRMRNFNEDISTY

Nucleotide sequence

Length: 981

>Harore.CG.MTP2014.S425.g06453.01.t
ATGGAAATGGCCACAGAAGAACTGAAAACAGTTAGCATATTCGGTTTCGACATCCACATC
ATCTTTTCTATTTCCACTGCAAAGCACATCTGCTTAATCAACCAATCAATCTCTAAAATG
GAAGCCATCAAGAAGAAGATGCAAATGTTGAAAATGGACAAAGAAAACTCCATCGATAGA
AAAGAGCAAGCTGAAGTAGACAGAAAGAACGTGGAAGAGAAAGTTGGCGGGCTTGAAGAA
GAACTTCATACCCTTGAAAAGAGACTGAAAGGAACAGAAGACGAACTCAGCACACACCAA
GAAAAACTGGGACAATCAAACGACTCTCTCGAAGCAGCTGAGAAAAAGGCGTCTGATGCT
GAGCAAGAAGTATCTGATCTGAACAAGAAAATCTCCGGTCTCGAAGACGAACTCGAGAGT
GCACAAGAAAAACTTGCGATATCTCTCACTAAGTTGGAAGATGCTGAAAAGGCTGCTGAT
GAAAGCGAGCGGGGACGCAAAGTCATTGAGAACAGATCTCTCAAAGATCAAGAGAAATTA
CAACTCCAGGAAGTTCATCTGCAAGAGGCGAAGGACATCGCCGAAGATGCCGACAGGAAA
TACGAAGAAGTTGCTCGCAAACTTGCTACGGTTGAAGGAGATTTGGAACGAGGCGAAGAG
CGAGCAGAACTTGCTGAGAGTAAATCAACTGAGCTCGAGGAAGAAATGAAAAACGCTGCA
AACAACCTGAAATCTCTCGAAGCAGCTGCAGAAAAGTATGCCACGAAAGAAGCAATCTTC
GCAGACGAAGTGAAAACGCTTTCAGACCGATTGAAAGATTCTGAAGATCGCGCTGAGTCT
GCTGAAAAACTGGTTGTGGAATTGGAAAAAAGCATTGATGACATAGAAGCTTATCTCATT
CTCTATTTTCTTTCATTAGATGAAGTTTACAAACAGAAAATGCGAATGAGAAATTTCAAC
GAAGACATCTCTACTTACTAG

InterProScan

Pfam
Tropomyosin (IPR000533) - T[87-302] 5.6E-69
PRINTS
Tropomyosin (IPR000533) - T[123-140] 4.3E-50 - T[159-179] 4.3E-50 - T[184-212] 4.3E-50 - T[214-237] 4.3E-50 - T[270-295] 4.3E-50

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 61.268 % 295 6.5E-100
TPM1_HUMAN 59.507 % 302 9.71E-103
TPM2_HUMAN 59.155 % 285 5.43E-96