- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C3.736.v1....' >
- Clone 'cima8106261' >
- Transcript 'KH2012:KH.C9.314.v1....' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S427.g02154.01.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
S427 [71,705 / 83,095]
Amino acid sequence
Length: 666
>Harore.CG.MTP2014.S427.g02154.01.p
MGDYSQKRPLEDAEEPGAKKLASQNDSIGSQLGNMQNQIPGGRPTITESFRLPDKLVGLV
IGKGGENISRMQEQSGCRIQISQDCQGGEDRPCTLTGTPEEIGQCREMLQETISKAAGNM
GVGMPAGLEEPLMGAQTVIQLMIPPDKCGLIIGKGGETIKAIQQNIGVKMMLIQDTTQNT
GMDKPLRISGEPMKVEQAKQHIEQIMAQRDLQQQQQQMQRGGGGGGGGNGGGGGRMNFPS
GPQKLIPVPKPAVGVVIGKGGDMITRIQNETGTRVQFKQEEEDPNVPHRMCTITGPHENI
QKAIEKIQELIQSVRDHDNSGMGGGQGDGSRGRNRPGGSFGQWEGGPGGMVRGRSGPGMN
TVEYNVPTNKTGLVIGKGGENIRQINQQSQAHVEIQRNPPPGSDQMYKTFIIKGTPEQIA
LAQQLIQEKVEGGPGGGGNHGHGGPGHVGGMGIMGHGPPGAHHGPGPGGPGGYGPPPPQN
NFGAPPPGPGGFGGPPQGPPQQAQPPQQFQNQQPWAGAPNQYQWPQPGGPQQNGAIPQDP
NKPPDSNAAAWANYYNYYQNQGQQPAAAAAAVAAAYPQQAAAAPGTVVHTQTAAGQPDYT
KAWEEYYKKQAEAAAPAAVNPAAASQAGGADYSAAWAEYYRQYAQYYQQSQAQQQYSTAP
AAPAQQ
Nucleotide sequence
Length: 2,001
>Harore.CG.MTP2014.S427.g02154.01.t
ATGGGCGATTATTCACAAAAGAGACCACTAGAAGATGCTGAAGAACCTGGTGCAAAAAAA
TTAGCTTCACAGAATGATTCAATTGGTTCTCAATTAGGAAATATGCAGAACCAAATACCA
GGTGGAAGACCCACCATTACAGAAAGCTTTAGACTGCCAGACAAACTAGTCGGTTTGGTT
ATAGGGAAAGGTGGCGAGAACATTAGTAGAATGCAGGAGCAGAGTGGGTGTCGTATACAG
ATATCACAAGATTGTCAAGGAGGTGAAGACAGACCATGCACATTGACAGGAACGCCAGAA
GAAATAGGTCAATGTCGTGAAATGTTGCAAGAGACCATCAGTAAAGCAGCCGGTAATATG
GGTGTCGGCATGCCCGCAGGCTTAGAGGAACCATTGATGGGAGCGCAGACCGTCATACAG
CTCATGATTCCTCCTGATAAATGCGGGTTGATCATCGGCAAAGGAGGAGAAACTATTAAA
GCGATCCAGCAGAACATCGGAGTGAAAATGATGTTGATTCAAGACACCACACAGAATACT
GGGATGGATAAACCGCTGAGAATTAGCGGAGAACCTATGAAAGTTGAGCAAGCCAAACAG
CATATCGAACAGATCATGGCTCAGCGTGATTTGCAGCAACAGCAACAACAGATGCAGAGA
GGTGGAGGAGGTGGTGGTGGTGGCAACGGCGGAGGTGGAGGAAGAATGAATTTTCCCTCT
GGACCCCAGAAACTGATCCCCGTTCCTAAACCTGCAGTCGGAGTCGTCATCGGTAAAGGT
GGAGACATGATAACTCGGATCCAGAATGAAACTGGAACGAGGGTGCAGTTTAAACAGGAG
GAAGAAGATCCAAATGTTCCTCACCGTATGTGTACAATCACCGGTCCGCATGAAAATATC
CAGAAAGCGATCGAAAAAATTCAAGAACTCATCCAGAGCGTTCGTGATCATGATAATTCA
GGGATGGGAGGCGGTCAAGGTGACGGTTCCAGAGGTCGCAACCGTCCCGGTGGCAGTTTC
GGACAGTGGGAAGGAGGGCCAGGTGGCATGGTGCGCGGTCGATCTGGACCCGGGATGAAC
ACTGTTGAATATAATGTGCCGACAAACAAGACTGGTCTCGTGATTGGAAAAGGTGGTGAA
AATATCCGTCAAATTAATCAACAATCTCAAGCTCATGTTGAAATACAAAGAAATCCGCCA
CCAGGAAGCGATCAAATGTATAAGACATTTATTATCAAAGGTACACCGGAACAGATTGCA
CTAGCTCAACAACTTATTCAAGAAAAAGTTGAGGGTGGTCCCGGTGGCGGTGGTAACCAT
GGACATGGAGGGCCAGGCCACGTTGGTGGCATGGGTATCATGGGCCATGGTCCTCCTGGA
GCTCATCATGGACCAGGGCCAGGTGGCCCTGGAGGGTATGGACCCCCGCCCCCACAGAAC
AATTTTGGAGCGCCTCCGCCAGGACCCGGCGGGTTTGGTGGACCCCCTCAAGGTCCACCA
CAGCAGGCTCAGCCTCCCCAGCAATTCCAGAACCAGCAACCGTGGGCAGGTGCACCCAAC
CAGTATCAGTGGCCCCAGCCTGGTGGACCCCAACAAAATGGGGCAATCCCACAGGACCCA
AACAAGCCACCGGACAGCAATGCCGCTGCATGGGCAAATTATTACAATTATTATCAAAAC
CAAGGTCAGCAACCTGCGGCAGCTGCAGCAGCAGTCGCGGCGGCGTACCCACAACAGGCG
GCAGCCGCACCAGGGACGGTCGTACACACACAGACTGCTGCTGGGCAACCGGACTACACC
AAAGCTTGGGAAGAGTATTACAAGAAGCAAGCTGAAGCAGCAGCTCCAGCAGCTGTCAAT
CCTGCAGCTGCTTCACAGGCTGGTGGAGCGGATTATAGTGCGGCTTGGGCAGAGTACTAT
CGTCAATATGCTCAGTATTATCAACAATCGCAAGCGCAGCAACAATACTCTACAGCACCT
GCAGCTCCTGCACAGCAGTAG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[30-119] 8.5E-25 - T[129-208] 2.2E-23 - T[237-339] 6.5E-26 - T[354-434] 1.4E-27 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[38-115] 1.29E-18 - T[135-233] 2.48E-17 - T[238-314] 4.68E-19 - T[357-457] 6.87E-17 |
| SMART |
KH_dom (IPR004087) - T[44-114] 1.6E-17 - T[135-207] 1.8E-17 - T[240-312] 1.8E-15 - T[358-431] 4.6E-17 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[47-111] 2.8E-17 - T[139-204] 9.5E-15 - T[246-309] 3.2E-16 - T[361-428] 1.6E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 45.349 % | 318 | 1.71E-99 |
| FUBP2_HUMAN | 43.925 % | 307 | 7.61E-95 |
| FUBP3_HUMAN | 35.933 % | 320 | 3.37E-101 |