- Transcript 'KH2012:KH.C3.736.v1....' >
- Transcript 'KH2012:KH.S425.9.v1....' >
- Transcript 'Boleac.CG.SB_v3.S0.g...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S427.g02154.02.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
S427 [71,705 / 79,358]
Amino acid sequence
Length: 678
>Harore.CG.MTP2014.S427.g02154.02.p
MQGVWKVFDIFVQFQPGHKSNDNFFEEPGAKKLASQNDSIGSQLGNMQNQIPGGRPTITE
SFRLPDKLVGLVIGKGGENISRMQEQSGCRIQISQDCQGGEDRPCTLTGTPEEIGQCREM
LQETISKAAGNMGVGMPAGLEEPLMGAQTVIQLMIPPDKCGLIIGKGGETIKAIQQNIGV
KMMLIQDTTQNTGMDKPLRISGEPMKVEQAKQHIEQIMAQRDLQQQQQQMQRGGGGGGGG
NGGGGGRMNFPSGPQKLIPVPKPAVGVVIGKGGDMITRIQNETGTRVQFKQEEEDPNVPH
RMCTITGPHENIQKAIEKIQELIQSVRDHDNSGMGGGQGDGSRGRNRPGGSFGQWEGGPG
GMVRGRSGPGMNTVEYNVPTNKTGLVIGKGGENIRQINQQSQAHVEIQRNPPPGSDQMYK
TFIIKGTPEQIALAQQLIQEKVEGGPGGGGNHGHGGPGHVGGMGIMGHGPPGAHHGPGPG
GPGGYGPPPPQNNFGAPPPGPGGFGGPPQGPPQQAQPPQQFQNQQPWAGAPNQYQWPQPG
GPQQNGAIPQDPNKPPDSNAAAWANYYNYYQNQGQQPAAAAAAVAAAYPQQAAAAPGTVV
HTQTAAGQPDYTKAWEEYYKKQAEAAAPAAVNPAAASQAGGADYSAAWAEYYRQYAQYYQ
QSQAQQQYSTAPAAPAQQ
Nucleotide sequence
Length: 2,037
>Harore.CG.MTP2014.S427.g02154.02.t
ATGCAAGGTGTCTGGAAAGTTTTTGATATTTTCGTCCAATTTCAGCCAGGGCATAAATCA
AATGATAATTTTTTTGAAGAACCTGGTGCAAAAAAATTAGCTTCACAGAATGATTCAATT
GGTTCTCAATTAGGAAATATGCAGAACCAAATACCAGGTGGAAGACCCACCATTACAGAA
AGCTTTAGACTGCCAGACAAACTAGTCGGTTTGGTTATAGGGAAAGGTGGCGAGAACATT
AGTAGAATGCAGGAGCAGAGTGGGTGTCGTATACAGATATCACAAGATTGTCAAGGAGGT
GAAGACAGACCATGCACATTGACAGGAACGCCAGAAGAAATAGGTCAATGTCGTGAAATG
TTGCAAGAGACCATCAGTAAAGCAGCCGGTAATATGGGTGTCGGCATGCCCGCAGGCTTA
GAGGAACCATTGATGGGAGCGCAGACCGTCATACAGCTCATGATTCCTCCTGATAAATGC
GGGTTGATCATCGGCAAAGGAGGAGAAACTATTAAAGCGATCCAGCAGAACATCGGAGTG
AAAATGATGTTGATTCAAGACACCACACAGAATACTGGGATGGATAAACCGCTGAGAATT
AGCGGAGAACCTATGAAAGTTGAGCAAGCCAAACAGCATATCGAACAGATCATGGCTCAG
CGTGATTTGCAGCAACAGCAACAACAGATGCAGAGAGGTGGAGGAGGTGGTGGTGGTGGC
AACGGCGGAGGTGGAGGAAGAATGAATTTTCCCTCTGGACCCCAGAAACTGATCCCCGTT
CCTAAACCTGCAGTCGGAGTCGTCATCGGTAAAGGTGGAGACATGATAACTCGGATCCAG
AATGAAACTGGAACGAGGGTGCAGTTTAAACAGGAGGAAGAAGATCCAAATGTTCCTCAC
CGTATGTGTACAATCACCGGTCCGCATGAAAATATCCAGAAAGCGATCGAAAAAATTCAA
GAACTCATCCAGAGCGTTCGTGATCATGATAATTCAGGGATGGGAGGCGGTCAAGGTGAC
GGTTCCAGAGGTCGCAACCGTCCCGGTGGCAGTTTCGGACAGTGGGAAGGAGGGCCAGGT
GGCATGGTGCGCGGTCGATCTGGACCCGGGATGAACACTGTTGAATATAATGTGCCGACA
AACAAGACTGGTCTCGTGATTGGAAAAGGTGGTGAAAATATCCGTCAAATTAATCAACAA
TCTCAAGCTCATGTTGAAATACAAAGAAATCCGCCACCAGGAAGCGATCAAATGTATAAG
ACATTTATTATCAAAGGTACACCGGAACAGATTGCACTAGCTCAACAACTTATTCAAGAA
AAAGTTGAGGGTGGTCCCGGTGGCGGTGGTAACCATGGACATGGAGGGCCAGGCCACGTT
GGTGGCATGGGTATCATGGGCCATGGTCCTCCTGGAGCTCATCATGGACCAGGGCCAGGT
GGCCCTGGAGGGTATGGACCCCCGCCCCCACAGAACAATTTTGGAGCGCCTCCGCCAGGA
CCCGGCGGGTTTGGTGGACCCCCTCAAGGTCCACCACAGCAGGCTCAGCCTCCCCAGCAA
TTCCAGAACCAGCAACCGTGGGCAGGTGCACCCAACCAGTATCAGTGGCCCCAGCCTGGT
GGACCCCAACAAAATGGGGCAATCCCACAGGACCCAAACAAGCCACCGGACAGCAATGCC
GCTGCATGGGCAAATTATTACAATTATTATCAAAACCAAGGTCAGCAACCTGCGGCAGCT
GCAGCAGCAGTCGCGGCGGCGTACCCACAACAGGCGGCAGCCGCACCAGGGACGGTCGTA
CACACACAGACTGCTGCTGGGCAACCGGACTACACCAAAGCTTGGGAAGAGTATTACAAG
AAGCAAGCTGAAGCAGCAGCTCCAGCAGCTGTCAATCCTGCAGCTGCTTCACAGGCTGGT
GGAGCGGATTATAGTGCGGCTTGGGCAGAGTACTATCGTCAATATGCTCAGTATTATCAA
CAATCGCAAGCGCAGCAACAATACTCTACAGCACCTGCAGCTCCTGCACAGCAGTAG
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[42-131] 8.8E-25 - T[141-220] 2.2E-23 - T[249-351] 6.7E-26 - T[366-446] 1.5E-27 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[50-127] 1.33E-18 - T[147-245] 2.48E-17 - T[250-326] 4.82E-19 - T[369-469] 7.01E-17 |
| SMART |
KH_dom (IPR004087) - T[56-126] 1.6E-17 - T[147-219] 1.8E-17 - T[252-324] 1.8E-15 - T[370-443] 4.6E-17 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[59-123] 2.9E-17 - T[151-216] 9.8E-15 - T[258-321] 3.3E-16 - T[373-440] 1.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 44.55 % | 303 | 8.08E-94 |
| FUBP2_HUMAN | 43.333 % | 296 | 1.08E-90 |
| FUBP3_HUMAN | 36.22 % | 318 | 1.72E-100 |