- Transcript 'KH2012:KH.C8.640.v2....' >
- Transcript 'KH2012:KH.C14.176.v1...' >
- Transcript 'KH2012:KH.L65.1.v1.A...' >
- Transcript 'KH2012:KH.C8.640.v2....' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S42.g12648.02.t
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
S42 [193,938 / 196,985]
Amino acid sequence
Length: 573
>Harore.CG.MTP2014.S42.g12648.02.p
MSPVTSKYNRNRNISYDTCTGESKQEELCVASCGSSVIPSEWGVWSSYGSCVSAEPLCLS
GIRTRTRQCSNNGLVVSSTLCTGGIAVATESSPCNTNLCSKFDAWVNGSCSLTCGTGTLT
STRTCVTGTAAASCTSKTASCSQTTCRKNYKIYLTVYEWDQWTSWSSCSDTCTESPQTRT
RVCKDKISGTPATTAKCAGSLTPTQTETQNCNAGSCTAYSAWALSACSVTCAAGTQSEKR
TCTASGTIPAGCDTQNSKACDLGVCKWLQIVLIDLFGLAFSPTTDKDLDIVVLVDGSSMT
DSCLLKEITLGWRAPFTSASGLLTRTNFPYYFKQLDIVNGFVKMNIILLSYFLFHLSGRK
TNLSGTNSSLNDQLLSDWKTVALDKTRLALHDNSGACTYVSNSDTTSFFQLNYLNEAITK
AKVSFIHISVDTMSMACGLNNVPYSLNCIHVGHFIATNGDRPTSKNVLIIFLGDYRTLPS
GTSFLNVIGIVRKQYTKYDLIAVISTLDHTTLTTTVAETQEKFCNSYGCMRKNPNGCVRY
IGHLGEPYTTIVPRFRTMKNNQYILLMTIVNYY
Nucleotide sequence
Length: 1,722
>Harore.CG.MTP2014.S42.g12648.02.t
ATGTCACCTGTTACATCAAAGTACAATCGAAATAGAAATATTTCTTATGACACGTGTACC
GGAGAGTCAAAACAAGAAGAGCTATGCGTTGCTAGCTGTGGATCTTCTGTTATACCATCT
GAATGGGGAGTTTGGTCTAGCTACGGAAGCTGTGTGTCAGCCGAACCACTTTGCCTAAGC
GGAATCCGGACTAGGACGAGACAATGTAGCAATAATGGATTGGTGGTTAGCAGCACTCTG
TGTACAGGAGGAATCGCGGTTGCAACAGAGTCTTCTCCTTGCAACACAAATCTCTGCTCG
AAATTTGATGCCTGGGTTAATGGTAGCTGCAGTCTAACCTGTGGAACTGGAACACTGACG
TCGACAAGAACATGCGTAACAGGAACAGCCGCTGCAAGCTGTACATCAAAAACAGCATCA
TGTTCCCAGACCACTTGCCGTAAGAATTATAAAATATATTTAACGGTCTATGAATGGGAT
CAATGGACATCATGGTCTAGCTGTTCTGACACATGTACAGAGTCTCCCCAAACAAGAACA
CGTGTATGCAAAGATAAAATATCTGGTACACCAGCAACAACTGCAAAATGTGCTGGTAGT
CTCACACCTACTCAGACCGAAACTCAGAATTGTAATGCAGGATCGTGTACTGCCTACTCT
GCTTGGGCACTGAGTGCGTGCTCTGTCACCTGTGCTGCAGGAACACAAAGCGAAAAAAGA
ACATGCACTGCATCGGGAACTATTCCGGCAGGTTGCGACACTCAGAACTCGAAAGCCTGC
GATCTTGGAGTTTGTAAGTGGCTTCAAATAGTTCTCATTGATTTGTTCGGTTTAGCCTTT
AGTCCAACTACTGACAAAGATCTTGATATTGTCGTATTGGTGGACGGTTCCTCAATGACT
GATAGCTGTCTGCTGAAAGAAATAACGCTTGGATGGAGGGCTCCATTCACATCCGCGTCT
GGATTACTGACACGAACAAACTTTCCCTATTACTTCAAGCAGTTGGATATTGTTAATGGG
TTCGTTAAAATGAATATAATTCTACTATCATATTTTCTGTTCCATTTATCCGGTCGTAAA
ACAAATTTGTCGGGAACAAATTCATCCCTTAACGACCAATTACTCTCAGATTGGAAAACT
GTAGCACTCGATAAAACCAGACTTGCACTCCACGATAACAGCGGGGCGTGCACCTATGTT
TCAAATTCTGATACTACCAGTTTCTTTCAGCTGAATTACTTGAATGAAGCAATTACTAAA
GCGAAGGTAAGTTTTATCCATATCTCTGTTGATACTATGTCAATGGCTTGTGGCCTCAAT
AATGTACCATACTCCCTCAACTGCATCCATGTAGGTCATTTTATTGCGACGAATGGCGAT
CGACCTACAAGCAAAAATGTCCTTATTATTTTCCTCGGCGACTACAGAACATTGCCTTCA
GGAACATCATTTCTGAATGTCATTGGTATTGTAAGAAAGCAATACACCAAATACGATTTA
ATAGCTGTCATCTCAACGTTGGATCACACCACGCTAACAACTACTGTAGCAGAGACTCAG
GAAAAATTCTGCAATAGCTATGGATGTATGAGGAAGAACCCCAACGGATGTGTGAGATAC
ATTGGACATTTAGGAGAGCCTTACACCACCATTGTTCCGAGATTCAGAACTATGAAAAAT
AACCAATACATTTTACTTATGACAATCGTTAATTATTATTAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[38-99] 2.6E-6 - T[157-216] 1.3E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[38-99] 3.92E-6 - T[158-216] 1.57E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[39-100] 8.773 - T[156-217] 10.036 |
| SMART |
TSP1_rpt (IPR000884) - T[42-100] 0.058 - T[102-147] 1.5 - T[159-217] 6.9E-5 - T[219-266] 0.054 |
| Pfam |
TSP1_rpt (IPR000884) - T[161-216] 1.3E-4 - T[224-265] 7.7E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 29.767 % | 82 | 4.3E-16 |