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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R98....' > 
  2. Transcript 'KH2012:KH.C2.88.v2.A...' > 
  3. Transcript 'KH2012:KH.L96.50.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S43.g06894.03.t

Possible name(s)

Harore.CG.MTP2014.S43.g06894

Gene model

Harore.CG.MTP2014.S43.g06894

Location

S43 [129,914 / 135,418]

Sequences

Amino acid sequence

Length: 1,204

>Harore.CG.MTP2014.S43.g06894.03.p
LMSRFCVLCVEPNQVLFINECIALMLAVIAAITIDQYEMCSTLECCFAKSNVNSCIVSAQ
DTGLQHLVPQQKRVQSKPRKPTNVFIMGVLNIIILLLLCGSSLANKCYRCQDAASHEDCN
AQGMTCTASSKESCITVVRNENSIFTIDKFCKQTLACNDLENQNQFLCKTEKGSSDVSIC
FYCCRGNLCNDVIEENYRMSKSKNITRKQLKKPTKHSKVVSMSQGARIKLANDIAKSVAL
KKTETIGKVPTKVSKVLKDKTRIILLKNMGSKSKTSLTIPRGTSARIWSSPTLMNQNPVQ
KQQSAAPSNFASTCGIPKVSNITLQRVGVWPSGASILVEITDTANVIAGWAVLLIFSKPL
PSNCTINVWSSTLVEDKTNRQVFLIINRDHNADISSHSTFNITFVVDRCPPYFQVTLNQA
LAGFYDYSLTDGTCKILTTTAAPNAYTTPTPTPRTTPFASLSTTTATQTMTMPTTNAFAS
TSAVGINTSAAITTVTSTSASIIPSSSCKYSPDSYSLSGPAYLSSNGKMQINAFVALANG
IGISSTNWTVKLIFNVPVEGVLSWKLQTFNYSADGRVWIMKPIGPFIRFIKLYFDIIVTV
DGTSPLPVAAVYFCPDGSNNDLTIPSGVKYPYGATPSPPLSTTTNIAIATTTLGLDRCSG
ESGILPPISRPTVVNFKPSPLTDNLRFDYNELLHKSILFYDAQRSGKLSTNNRILWRGDS
GLLNGCNVGVDLTGGWYNGIDNVKYGFPMASAVTILAWGLVEFPDAYEDAGEMKNALDSL
RWATDYLIKTHSGIDEIWGQVGDPLIDQSVWTRPEQLNTAVPTYLLNSTNPGSDLAGETA
AALAASSIVFKATDPLYSATMLLHAMQLYDFADRYRGKYDASIPNADRFYPSVSGYEDEL
VWACLWLYMATGNQTYLYDGQNKMLEFNLINRPFAFSWDNKQAGIEVLLAKLVRDTNTKM
RFRGDVENFMNNLIMSPTIPRTPAGLIFFSNYGTNGLAANAAFLALVAATKLQPELPNSY
WYKEFARQQIHAMLGDGDGGMSYIVGFGNDPPTQPFHSASSCPKWSNPPAAICNQTAFNS
TFPNPHILYGALVAGPDLSGFFDYNRKNFINNEVSINYNAGFQSAIAESHDFSIQLCSVN
STSSDIVTSKSITCCQKGTTRCQKRGICIVLSCVQYLYDAYIVYLVILLHCHKCKSVRIK
KSFV

Nucleotide sequence

Length: 3,617

>Harore.CG.MTP2014.S43.g06894.03.t
CATTAATGTCACGTTTCTGCGTGCTTTGCGTTGAACCCAATCAAGTATTATTTATCAATG
AATGTATTGCACTTATGTTGGCCGTAATCGCTGCAATAACCATTGATCAATATGAGATGT
GTAGCACTTTAGAGTGCTGCTTTGCAAAGAGCAATGTCAACAGTTGCATAGTATCTGCCC
AAGACACAGGACTGCAGCATTTGGTACCCCAACAGAAACGAGTTCAGTCAAAACCACGAA
AACCCACAAACGTATTCATTATGGGTGTTTTGAACATAATAATACTCCTTCTGCTGTGTG
GATCATCGTTAGCAAATAAGTGCTACAGATGTCAAGATGCTGCTTCCCATGAAGACTGCA
ACGCACAGGGAATGACTTGCACTGCCAGTAGTAAAGAATCCTGTATTACGGTTGTACGCA
ATGAAAACAGCATTTTTACAATTGACAAATTTTGCAAACAAACTCTTGCCTGCAATGACC
TTGAAAACCAGAACCAGTTCCTTTGCAAAACGGAAAAAGGGTCATCTGATGTCTCCATAT
GTTTTTACTGTTGTCGTGGTAACTTGTGCAATGATGTGATCGAAGAAAACTACCGAATGT
CAAAATCCAAGAATATAACCCGAAAGCAATTGAAGAAGCCCACGAAACATTCCAAAGTTG
TGTCCATGTCACAGGGCGCAAGGATCAAGTTAGCGAATGATATTGCTAAGAGCGTTGCTT
TGAAAAAAACCGAAACCATCGGTAAAGTACCAACGAAAGTATCTAAGGTTTTGAAAGATA
AAACTAGAATCATATTGCTTAAAAATATGGGAAGCAAATCAAAAACATCCCTCACGATAC
CACGGGGAACATCCGCAAGAATATGGTCATCCCCGACTTTGATGAATCAGAACCCTGTGC
AAAAACAGCAAAGTGCGGCTCCTTCAAACTTTGCTTCGACATGTGGCATCCCGAAAGTTA
GTAACATAACTCTTCAAAGAGTGGGAGTTTGGCCCTCCGGTGCTAGCATTCTTGTTGAGA
TTACCGACACAGCAAATGTGATTGCTGGCTGGGCAGTGCTATTAATATTCTCCAAACCCC
TGCCTTCTAATTGTACGATTAATGTTTGGTCATCTACGTTGGTAGAAGATAAAACCAATC
GTCAAGTGTTTCTCATAATTAATCGTGACCACAATGCGGATATATCCTCACATTCAACGT
TTAACATTACATTCGTCGTTGATCGTTGCCCACCTTACTTTCAAGTTACGCTCAATCAAG
CTCTTGCAGGTTTTTATGACTATTCGCTGACAGATGGAACATGCAAAATCCTGACGACTA
CTGCCGCCCCTAATGCATACACGACCCCAACTCCGACACCTAGAACAACTCCCTTTGCAT
CCCTATCAACAACTACAGCTACGCAAACGATGACCATGCCAACTACGAATGCCTTTGCCT
CTACTTCTGCTGTTGGTATTAACACAAGTGCTGCTATTACAACAGTAACATCCACAAGTG
CATCTATCATCCCATCATCATCTTGCAAATATTCTCCTGACAGTTACAGTCTGTCAGGAC
CAGCGTATCTTAGTAGCAACGGGAAGATGCAGATCAACGCTTTTGTCGCTCTTGCGAACG
GGATAGGAATATCAAGCACGAACTGGACTGTAAAATTAATTTTTAATGTGCCGGTTGAAG
GAGTTCTGAGCTGGAAACTCCAAACTTTCAACTATTCTGCAGATGGTAGGGTGTGGATTA
TGAAACCTATTGGACCGTTCATCAGGTTTATTAAGCTGTACTTTGACATAATCGTTACTG
TAGACGGAACATCTCCGCTACCTGTTGCCGCCGTGTACTTCTGTCCGGACGGGAGCAATA
ATGATCTGACAATACCAAGCGGTGTTAAATATCCCTATGGTGCTACGCCATCGCCACCAC
TTTCAACTACTACCAATATCGCTATTGCTACCACAACCCTTGGCCTGGATCGATGTAGTG
GCGAAAGTGGTATTTTGCCTCCTATCAGTAGGCCAACTGTTGTCAATTTCAAGCCATCAC
CACTAACAGATAATCTGAGATTTGACTACAATGAATTACTCCACAAGTCAATACTGTTCT
ATGACGCGCAACGATCGGGCAAACTTTCCACAAACAATCGAATTTTGTGGCGGGGCGACT
CTGGTTTACTCAACGGCTGTAATGTGGGTGTTGATCTCACTGGAGGATGGTATAATGGTA
TTGATAATGTTAAGTACGGATTTCCCATGGCCTCAGCCGTCACAATCTTAGCATGGGGAC
TAGTCGAATTTCCGGACGCGTATGAAGATGCGGGGGAAATGAAAAACGCCCTGGACTCGT
TGCGATGGGCTACTGACTACTTGATCAAGACTCATTCGGGAATTGATGAAATATGGGGAC
AAGTTGGAGATCCTCTTATAGATCAGTCAGTTTGGACACGACCTGAACAGCTCAACACTG
CAGTCCCAACATATCTGTTAAATTCAACCAACCCCGGGAGTGATTTAGCTGGGGAGACAG
CGGCCGCATTAGCAGCGTCTTCTATTGTTTTCAAGGCGACGGACCCTTTGTATTCTGCCA
CAATGTTACTGCATGCAATGCAGCTTTACGACTTCGCTGACCGCTACAGGGGTAAATACG
ACGCATCTATACCAAATGCAGACAGATTTTACCCATCTGTAAGTGGGTACGAAGATGAGC
TAGTATGGGCGTGCTTATGGTTGTATATGGCCACTGGGAACCAAACGTATCTTTACGATG
GGCAAAACAAAATGCTAGAATTCAATTTGATCAACAGGCCGTTTGCTTTCTCCTGGGATA
ACAAACAAGCCGGAATTGAGGTATTGTTGGCGAAACTTGTACGAGACACGAATACCAAAA
TGAGGTTTCGTGGTGATGTAGAAAACTTTATGAACAACCTCATTATGAGTCCGACTATTC
CCAGGACACCTGCCGGACTGATTTTCTTTTCAAATTACGGCACAAATGGTTTAGCAGCAA
ATGCTGCTTTCCTGGCACTTGTAGCTGCGACCAAACTTCAGCCCGAGCTTCCAAATTCTT
ATTGGTACAAAGAGTTCGCAAGACAGCAGATCCACGCAATGCTTGGTGATGGCGATGGTG
GGATGAGCTACATTGTTGGATTTGGTAATGACCCTCCCACACAACCATTCCACTCTGCCA
GTTCTTGTCCTAAGTGGTCTAATCCTCCCGCTGCCATCTGCAATCAAACGGCTTTCAATT
CCACGTTCCCTAACCCACACATACTGTACGGGGCGTTAGTTGCAGGCCCAGATTTATCTG
GATTCTTTGATTACAATAGAAAAAATTTCATCAATAACGAAGTATCGATCAACTACAATG
CGGGATTCCAGTCAGCCATTGCAGAAAGCCATGATTTTTCAATACAACTTTGTTCAGTAA
ACTCTACTAGTAGTGACATAGTCACAAGTAAAAGCATCACCTGCTGTCAAAAAGGAACCA
CTAGGTGCCAGAAAAGAGGAATTTGTATTGTGCTGTCTTGTGTTCAGTATTTATATGATG
CTTATATTGTATACTTAGTAATCCTATTACACTGTCACAAATGCAAGAGTGTCAGAATTA
AAAAGAGCTTCGTATGA

InterProScan

Gene3D
6hp_glycosidase-like_sf (IPR012341) - T[683-1133] 6.2E-151
SUPERFAMILY
6-hairpin_glycosidase_sf (IPR008928) - T[687-1129] 1.36E-126
Pfam
Glyco_hydro_9 (IPR001701) - T[689-1125] 4.0E-119

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value