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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S444.g08805.01.t

Possible name(s)

MDH1; MDH1B

Location

S444 [36,688 / 42,396]

Sequences

Amino acid sequence

Length: 593

>Harore.CG.MTP2014.S444.g08805.01.p
MAVRGPRYLGNDSCDSIKMSQFVIAGSSDCPYYAKVELLADQLAVNLPEFKIHKIVKPKE
EWDDWLKKTCDKNEWEHAKSPIVWRELVYRGGKGSLIGGFNEFMEYANCYYGVTSEMMTE
LMLKISNENNSACRDKIEEKNYYLGLSKPIKVCITNASGPVAYNLIPSIASGDVFGNKTE
IALMLLDNEENMSVLKGIEMDTFDLACPLLRKITLTTDAELAFKEASAVFFLDEVAIENE
EGQIDSRTDWLKRNANLFEEYAKKLSEVALSEVKVVVAGEGPVNFNTHVLIENATNILKQ
NIVAASRLQERRARALIARKLDVNSAGIKDTIVWGDCSYDGAANVHVDVSAGRCHGYDGA
IWGPKWFSRSVMEMVHDNKWISTDYITEHRDHQSKLNEKLKHKSSFSAASALASLMHDWI
HGTEGDEMFSLGVECEGWYDIKDCVFSLPVRFQPGSYQVVWDLKLDEETKKKLKDVENNI
KKDLQAVFPTEESTVDSGMKFDENAELISTMLQDSSVLPSKTPGGDKLEKIEEEDNEERK
SEAVEEEKIDSSEVKHEDEGSSEVNQEDETESTKDVVEEKEEETVAPTEEEDS

Nucleotide sequence

Length: 2,341

>Harore.CG.MTP2014.S444.g08805.01.t
CGATGATGCCATTGCGTTTCGAGTTAAGCTATATATGTTACGGAAATAGCATGACAGATA
CTTTGATTAACTCTCATTATCTAGAATTGAAATATATTTCAATACACATATAATATGCCG
CTCTGGCGCTGTTGGTTTTGGGCCACTTTTAGTAGTAGAAAAATATGACAACACTGTCTT
CGAGACCGATAATTTATTCTTCCGCAAGATGGCAGTACGGGGACCGCGTTACCTTGGTAA
CGACTCGTGTGACTCGATCAAAATGTCGCAGTTTGTTATAGCAGGTTCAAGTGATTGTCC
GTACTACGCGAAAGTTGAATTGCTTGCAGATCAACTTGCTGTGAATCTGCCAGAGTTTAA
AATTCACAAAATTGTTAAACCGAAAGAGGAATGGGATGACTGGCTGAAGAAAACTTGCGA
CAAAAATGAATGGGAACACGCAAAGAGCCCCATCGTGTGGAGAGAGCTTGTTTACAGAGG
CGGAAAGGGATCGTTGATCGGAGGATTCAATGAATTCATGGAATATGCTAATTGTTATTA
CGGAGTCACTTCAGAGATGATGACGGAATTAATGTTGAAAATTAGCAACGAAAATAATTC
AGCTTGTCGAGATAAAATCGAAGAAAAAAATTATTATCTCGGATTGAGTAAACCAATAAA
AGTTTGTATTACCAATGCTTCTGGACCTGTCGCTTATAACTTAATACCATCGATAGCAAG
CGGAGATGTCTTCGGAAACAAAACTGAAATAGCATTGATGCTTTTGGATAACGAGGAAAA
TATGAGCGTATTAAAAGGGATAGAAATGGACACCTTCGACCTTGCTTGCCCTCTACTAAG
AAAAATAACGCTCACGACTGACGCAGAACTCGCGTTCAAAGAAGCGTCGGCTGTATTTTT
CCTTGATGAGGTAGCGATTGAAAACGAGGAAGGTCAAATCGATTCAAGAACGGACTGGTT
AAAAAGGAACGCTAATTTATTTGAAGAATATGCAAAGAAGCTCAGTGAAGTTGCTTTATC
AGAAGTTAAGGTGGTTGTTGCAGGGGAAGGTCCAGTTAACTTCAACACACATGTCTTAAT
CGAAAACGCAACAAACATTTTGAAACAGAATATCGTAGCTGCATCAAGATTACAAGAGAG
AAGAGCTCGTGCTCTGATCGCCAGAAAACTCGACGTAAACTCCGCGGGAATCAAGGACAC
CATCGTGTGGGGAGATTGCTCGTACGATGGAGCAGCAAACGTTCACGTCGACGTCAGCGC
CGGACGTTGCCACGGATACGACGGCGCCATCTGGGGTCCGAAATGGTTCTCAAGATCTGT
GATGGAAATGGTTCATGATAACAAATGGATTTCAACTGACTACATAACTGAACATCGCGA
TCATCAATCTAAGCTAAATGAGAAGCTAAAACACAAGTCAAGCTTCAGCGCTGCTTCTGC
TCTGGCTTCACTCATGCATGACTGGATACACGGAACCGAGGGTGATGAAATGTTTTCACT
CGGAGTGGAGTGCGAAGGATGGTATGACATCAAGGACTGCGTCTTTTCGCTTCCTGTACG
ATTCCAACCCGGATCTTATCAGGTTGTCTGGGATTTGAAACTGGATGAAGAAACCAAAAA
GAAGCTCAAGGATGTGGAGAATAATATCAAGAAGGACCTGCAAGCAGTGTTCCCCACAGA
AGAATCAACTGTTGATAGTGGAATGAAATTCGATGAAAACGCCGAATTGATTTCGACGAT
GTTGCAGGATTCATCCGTGTTGCCGTCCAAGACACCGGGTGGCGATAAACTGGAGAAAAT
CGAAGAGGAAGACAATGAAGAACGCAAATCTGAAGCTGTGGAAGAAGAAAAAATTGATTC
TTCTGAGGTCAAACATGAAGACGAAGGATCTTCGGAAGTTAACCAGGAAGATGAAACAGA
ATCTACTAAGGATGTTGTGGAGGAGAAAGAGGAAGAAACGGTGGCACCAACGGAGGAAGA
AGATTCTTAATTTTTTTAAATTATTTTAAATATTTTTCCCCATGTTTCTGGGGCCGAAGA
GATATTTTTTCGAAGCGGCTACGGATTTTAAAACTCAGCATAATTATAATATAATTTATT
AGTAACAACTATAAGAACCATAATCTGTATAGGAAACAAAGATATATTAATATATAATTC
TTATTGATAGAAAAACAAAATCAGTTAACAAATGTGTAATCAACATTGAACCGATTAATC
TCAGTTAATCGCGGTTCAAACCTTTCACAAATCAATCACAAATGTCGTGTGACGAGGAAT
TCTTTTTCTAGTTCTTAACATGATATTAAAGAATGCATAGAAATATGAATGCCAACCATA
T

InterProScan

PANTHER
Malate_DH_type2 (IPR010945) - T[22-493] 1.0E-176
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[120-304] 2.49E-24
Pfam
Lactate/malate_DH_N (IPR001236) - T[150-302] 3.4E-12
Gene3D
Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[306-491] 2.0E-42
SUPERFAMILY
Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[307-488] 8.96E-29
Pfam
Lactate/malate_DH_C (IPR022383) - T[307-487] 6.9E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MDH1B_HUMAN 41.387 % 332 1.41E-107
MDHC_HUMAN 30.816 % 149 3.62E-40