- Transcript 'KH2012:KH.C6.67.v1.A...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Clone 'cign039j09' >
- Transcript 'Harore.CG.MTP2014.S9...' >
- Transcript 'Harore.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S446.g09683.01.t
Possible name(s)
SPECC1; SPECC1L; SPECC1L-ADORA2A
Gene model
Location
S446 [49,849 / 55,055]
Amino acid sequence
Length: 821
>Harore.CG.MTP2014.S446.g09683.01.p
MLHQSVFLHSGNACKMQFGNVDCRNQSLKILLNDRLREDPEKPSVEQQYMQLLDEREHLL
DIQEDSNSRVRKLEQQLKDSREFTSALEEQKRKVEREFASLIAERNRLEKTLQELKDSSL
ERKHLASIQHLEEALEQERERSSELLKSQAVRAVGDSHTSEELVALLDKQRKEKHDVEEK
YLAAEEELAQVREESEKLDDKVAELEEEMEAAGAKTKKDLSELSEVIDHLQEEIRVRILE
MEEAKETIFIMEDAVEQHMAVKKHDNHMISKLQSQMSTVKEEKFRLGKEIQQLKKEQRTQ
SEEWKQFQADLQMAVMIANDMKAETQSEVARLREENQLLDEKITKLQVENEQLRRRRKTM
IGLGESELRPGQRSVEKELAVLRESMGVSRRRYGEQHSPGVQSLIKSFDNQITTATEQLQ
QKTSPPSTPVSPTIPEMPLKKTMSENSFASSSKFSPSKALSGLPSQKGSMAPATNGTPIM
AEVSPIQRHHSMSSLHQQTSMDQQSPLAKISGVQQGSSRPGTPDGKRNSSADLSQLSSLL
LSREKRSSSTSDSRKHSLESRKPLSGLLLDRLSSSNPPSPTPSASGSTTGGHDSPIMTPV
APTAPQPVRRRALSSTNDDPLATLARRYGGSKRNALLKWCQEKTKGYAGIDITNFSSSWT
DGLAFCALVHANLPAHIPYDILQQQLATAIDQKTRNMLQAKNFRLGFAAAESVGIEPTLT
VDEMTNVKVASTDKRYIYLISRNTKSSVSLNTTTCVDDPTLRMLLCFVRHTYAAAALQWR
ISATVLFYQSEYTLLLTQREEELSPPCEEMSFSEVNYICAL
Nucleotide sequence
Length: 2,466
>Harore.CG.MTP2014.S446.g09683.01.t
ATGTTGCATCAGAGTGTATTCCTGCATAGCGGTAACGCATGCAAAATGCAGTTTGGAAAT
GTGGATTGCAGAAACCAATCACTTAAGATTCTACTGAACGACCGTTTAAGAGAGGATCCA
GAAAAGCCTTCAGTTGAGCAACAGTACATGCAGCTATTGGATGAGAGAGAACATTTATTA
GATATACAAGAAGATTCAAACAGCAGAGTTCGTAAGCTTGAACAGCAGCTGAAGGATTCG
CGAGAATTCACATCGGCCTTGGAAGAACAGAAAAGGAAAGTTGAAAGAGAATTCGCATCA
CTTATTGCTGAGAGAAATCGCTTGGAAAAAACGCTGCAGGAATTGAAGGATTCAAGTTTG
GAAAGGAAACATCTTGCTTCTATTCAGCATCTGGAAGAAGCTCTCGAACAGGAAAGAGAG
AGATCTAGTGAACTTTTGAAATCTCAGGCCGTGCGTGCGGTCGGAGATTCACACACAAGC
GAAGAACTAGTTGCGTTGCTCGATAAGCAGAGGAAAGAAAAACACGATGTGGAAGAAAAA
TATCTTGCTGCTGAAGAAGAGCTAGCACAAGTTAGAGAAGAAAGCGAAAAATTGGATGAC
AAGGTTGCCGAGCTCGAAGAGGAGATGGAAGCTGCTGGTGCTAAGACAAAGAAAGATTTA
TCAGAACTATCTGAAGTGATTGACCACCTTCAGGAAGAAATTCGGGTCCGAATACTCGAA
ATGGAAGAGGCAAAAGAAACAATCTTCATCATGGAAGATGCAGTCGAACAGCACATGGCT
GTGAAAAAGCATGACAATCATATGATTAGTAAATTGCAAAGTCAAATGTCAACCGTGAAG
GAAGAAAAATTTCGTCTTGGCAAAGAAATTCAACAGTTGAAGAAAGAGCAGAGGACGCAG
TCAGAGGAATGGAAACAATTTCAAGCCGACCTCCAGATGGCAGTAATGATCGCTAATGAT
ATGAAAGCAGAAACCCAGTCTGAAGTTGCTCGGCTTCGAGAGGAAAATCAACTTCTGGAT
GAGAAAATTACTAAGCTGCAAGTCGAAAATGAACAACTAAGAAGAAGAAGGAAGACGATG
ATCGGCCTTGGTGAATCAGAACTTCGTCCTGGCCAGAGATCGGTTGAAAAAGAACTGGCT
GTTTTGAGAGAGAGTATGGGAGTTTCAAGACGGAGATATGGAGAACAGCATTCACCCGGG
GTCCAGTCGCTGATCAAATCATTCGATAACCAAATTACTACGGCTACAGAGCAGCTACAG
CAGAAAACTTCACCCCCTAGCACCCCAGTTTCACCCACGATTCCAGAAATGCCGTTAAAG
AAAACAATGTCAGAAAATTCATTCGCATCGTCATCGAAATTCAGCCCATCCAAGGCACTG
AGCGGGCTTCCCAGCCAGAAAGGGTCGATGGCACCTGCCACCAATGGCACACCAATCATG
GCAGAAGTCAGTCCTATCCAGCGGCATCATTCCATGTCTTCATTGCATCAACAAACTTCC
ATGGATCAACAGTCTCCTTTGGCTAAGATCTCAGGCGTTCAACAGGGAAGCAGCCGTCCT
GGTACTCCAGATGGAAAAAGGAATAGTAGTGCAGACTTGTCTCAATTATCTTCACTTCTT
CTTTCTCGTGAAAAACGAAGTTCTTCCACATCAGATTCAAGAAAGCATTCTCTTGAATCG
AGAAAACCTCTATCAGGTCTCCTTCTCGATCGTCTGTCTTCATCTAACCCACCATCGCCG
ACACCGTCTGCAAGCGGTTCTACAACAGGGGGACACGACAGCCCCATCATGACACCCGTA
GCACCTACGGCACCACAACCCGTAAGGCGTAGAGCCTTGTCTTCCACGAATGACGATCCT
CTTGCAACTTTAGCACGTCGTTACGGTGGCTCAAAAAGGAACGCATTGCTCAAATGGTGT
CAAGAAAAAACTAAAGGGTATGCCGGCATCGATATCACAAATTTCAGTAGCAGTTGGACT
GATGGCCTCGCTTTTTGCGCTCTTGTACATGCTAACCTTCCCGCCCATATTCCATATGAT
ATTTTACAACAACAACTTGCCACTGCGATCGATCAAAAGACGAGAAATATGTTGCAGGCT
AAAAATTTCCGCCTCGGTTTCGCTGCAGCTGAGAGTGTAGGTATTGAACCAACGTTAACA
GTTGACGAAATGACGAATGTGAAAGTTGCAAGCACAGATAAGAGATATATATACTTAATA
TCTCGCAACACTAAATCCTCTGTATCATTAAACACTACAACGTGTGTTGATGATCCAACT
CTTCGTATGCTGCTGTGTTTCGTCCGCCACACATATGCTGCTGCTGCCCTCCAGTGGAGA
ATTTCTGCCACTGTTTTGTTCTACCAATCTGAATACACATTATTGTTAACACAAAGAGAG
GAGGAACTCTCACCTCCATGCGAGGAGATGTCATTTTCTGAAGTCAACTATATTTGTGCA
CTGTGA
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[621-731] 3.01E-20 |
| Gene3D |
CH_dom_sf (IPR036872) - T[628-744] 4.2E-24 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[630-744] 12.758 |
| Pfam |
CH-domain (IPR001715) - T[632-729] 7.4E-14 |
| SMART |
CH-domain (IPR001715) - T[632-742] 9.1E-8 |
| CDD |
CH-domain (IPR001715) - T[634-722] 5.69711E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CYTSA_HUMAN | 33.859 % | 310 | 4.61E-91 |
| CYTSB_HUMAN | 34.156 % | 255 | 5.12E-72 |